Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Syt7-204ENSMUST00000223586 1344 ntBASIC11.96□□□□□ -0.49
Col6a5A6H584 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col6a5A6H584 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.96□□□□□ -0.5
Col6a5A6H584 Gm18766-201ENSMUST00000189811 808 ntBASIC11.96□□□□□ -0.5
Col6a5A6H584 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col6a5A6H584 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col6a5A6H584 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col6a5A6H584 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a5A6H584 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.95□□□□□ -0.5
Col6a5A6H584 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.95□□□□□ -0.5
Col6a5A6H584 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a5A6H584 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Col6a5A6H584 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Gm12859-201ENSMUST00000117834 427 ntBASIC11.95□□□□□ -0.5
Col6a5A6H584 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Col6a5A6H584 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.95□□□□□ -0.5
Col6a5A6H584 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col6a5A6H584 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.95□□□□□ -0.5
Col6a5A6H584 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm6415-201ENSMUST00000118488 348 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm22189-201ENSMUST00000103822 86 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm6973-201ENSMUST00000117080 721 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm12008-201ENSMUST00000117791 755 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gm28630-201ENSMUST00000187806 498 ntBASIC11.94□□□□□ -0.5
Col6a5A6H584 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col6a5A6H584 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col6a5A6H584 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col6a5A6H584 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Col6a5A6H584 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms