Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm27463-201ENSMUST00000183569 57 ntBASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms