Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 Y_RNA.554-201ENST00000384672 102 ntBASIC-8.26□□□□□ -3.73
VPS13AQ96RL7 RNU6-985P-201ENST00000410182 104 ntBASIC-8.26□□□□□ -3.73
VPS13AQ96RL7 AC125388.1-201ENST00000459631 156 ntBASIC-8.27□□□□□ -3.73
VPS13AQ96RL7 MIR3202-2-201ENST00000635980 79 ntBASIC-8.27□□□□□ -3.73
VPS13AQ96RL7 Y_RNA.460-201ENST00000384255 102 ntBASIC-8.3□□□□□ -3.74
VPS13AQ96RL7 AC006362.1-201ENST00000567392 174 ntBASIC-8.31□□□□□ -3.74
VPS13AQ96RL7 RNY4P30-201ENST00000410216 95 ntBASIC-8.32□□□□□ -3.74
VPS13AQ96RL7 Y_RNA.422-201ENST00000384054 114 ntBASIC-8.35□□□□□ -3.75
VPS13AQ96RL7 RNU6-506P-201ENST00000516553 94 ntBASIC-8.35□□□□□ -3.75
VPS13AQ96RL7 SNORA20.1-201ENST00000364790 130 ntBASIC-8.36□□□□□ -3.75
VPS13AQ96RL7 RNU6-1137P-201ENST00000517073 99 ntBASIC-8.39□□□□□ -3.75
VPS13AQ96RL7 RNU6-1023P-201ENST00000516137 106 ntBASIC-8.4□□□□□ -3.75
VPS13AQ96RL7 Y_RNA.81-201ENST00000362997 102 ntBASIC-8.4□□□□□ -3.75
VPS13AQ96RL7 Y_RNA.574-201ENST00000384766 95 ntBASIC-8.41□□□□□ -3.76
VPS13AQ96RL7 MIR1302-1-201ENST00000637932 143 ntBASIC-8.41□□□□□ -3.76
VPS13AQ96RL7 SNORD42.2-201ENST00000365570 69 ntBASIC-8.42□□□□□ -3.76
VPS13AQ96RL7 RNU6-327P-201ENST00000516270 127 ntBASIC-8.43□□□□□ -3.76
VPS13AQ96RL7 Y_RNA.350-201ENST00000365409 98 ntBASIC-8.44□□□□□ -3.76
VPS13AQ96RL7 MIR3688-2-201ENST00000636963 87 ntBASIC-8.44□□□□□ -3.76
VPS13AQ96RL7 AL117351.2-201ENST00000513571 157 ntBASIC-8.44□□□□□ -3.76
VPS13AQ96RL7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-8.45□□□□□ -3.76
VPS13AQ96RL7 RNU7-200P-201ENST00000516105 62 ntBASIC-8.49□□□□□ -3.77
VPS13AQ96RL7 RNY3P1-201ENST00000365085 102 ntBASIC-8.5□□□□□ -3.77
VPS13AQ96RL7 AC009094.1-201ENST00000564443 426 ntBASIC-8.52□□□□□ -3.77
VPS13AQ96RL7 RNU6-573P-201ENST00000383938 106 ntBASIC-8.54□□□□□ -3.78
VPS13AQ96RL7 RNU6-1117P-201ENST00000384525 104 ntBASIC-8.55□□□□□ -3.78
VPS13AQ96RL7 Y_RNA.160-201ENST00000363677 92 ntBASIC-8.55□□□□□ -3.78
VPS13AQ96RL7 MIR1277-201ENST00000408536 78 ntBASIC-8.59□□□□□ -3.78
VPS13AQ96RL7 Y_RNA.261-201ENST00000364631 102 ntBASIC-8.59□□□□□ -3.79
VPS13AQ96RL7 AC069439.1-201ENST00000494739 167 ntBASIC-8.61□□□□□ -3.79
VPS13AQ96RL7 Y_RNA.506-201ENST00000384494 102 ntBASIC-8.62□□□□□ -3.79
VPS13AQ96RL7 RNU6-474P-201ENST00000384243 107 ntBASIC-8.64□□□□□ -3.79
VPS13AQ96RL7 RNU6-346P-201ENST00000516288 111 ntBASIC-8.67□□□□□ -3.8
VPS13AQ96RL7 MTND4LP19-201ENST00000403051 166 ntBASIC-8.67□□□□□ -3.8
VPS13AQ96RL7 RNU6-718P-201ENST00000516166 105 ntBASIC-8.67□□□□□ -3.8
VPS13AQ96RL7 SNORD78.1-201ENST00000390866 65 ntBASIC-8.68□□□□□ -3.8
VPS13AQ96RL7 U4.5-201ENST00000617137 123 ntBASIC-8.68□□□□□ -3.8
VPS13AQ96RL7 RNU6-1168P-201ENST00000390831 104 ntBASIC-8.69□□□□□ -3.8
VPS13AQ96RL7 AC134503.1-201ENST00000633048 54 ntBASIC-8.7□□□□□ -3.8
VPS13AQ96RL7 MTATP8P1-201ENST00000467115 207 ntBASIC-8.71□□□□□ -3.8
VPS13AQ96RL7 RNA5SP225-201ENST00000410874 135 ntBASIC-8.71□□□□□ -3.8
VPS13AQ96RL7 SNORD11.1-201ENST00000459482 85 ntBASIC-8.72□□□□□ -3.81
VPS13AQ96RL7 AC062037.2-201ENST00000610137 73 ntBASIC-8.75□□□□□ -3.81
VPS13AQ96RL7 RNU6-875P-201ENST00000516488 106 ntBASIC-8.75□□□□□ -3.81
VPS13AQ96RL7 MIR548F4-201ENST00000408515 105 ntBASIC-8.76□□□□□ -3.81
VPS13AQ96RL7 RNA5SP89-201ENST00000410300 108 ntBASIC-8.79□□□□□ -3.82
VPS13AQ96RL7 AL365222.1-201ENST00000614661 98 ntBASIC-8.79□□□□□ -3.82
VPS13AQ96RL7 RNY1P5-201ENST00000383890 115 ntBASIC-8.8□□□□□ -3.82
VPS13AQ96RL7 RNU6-751P-201ENST00000516382 101 ntBASIC-8.81□□□□□ -3.82
VPS13AQ96RL7 RNU6-886P-201ENST00000384319 105 ntBASIC-8.86□□□□□ -3.83
VPS13AQ96RL7 MIR3171-201ENST00000584270 74 ntBASIC-8.89□□□□□ -3.83
VPS13AQ96RL7 Y_RNA.489-201ENST00000384410 101 ntBASIC-8.91□□□□□ -3.84
VPS13AQ96RL7 Y_RNA.694-201ENST00000516677 117 ntBASIC-8.91□□□□□ -3.84
VPS13AQ96RL7 RNU6-22P-201ENST00000384355 107 ntBASIC-8.94□□□□□ -3.84
VPS13AQ96RL7 Y_RNA.138-201ENST00000363462 102 ntBASIC-8.95□□□□□ -3.84
VPS13AQ96RL7 RNU6-1212P-201ENST00000517023 104 ntBASIC-8.98□□□□□ -3.85
VPS13AQ96RL7 Y_RNA.149-201ENST00000363558 117 ntBASIC-9.04□□□□□ -3.86
VPS13AQ96RL7 RNU2-16P-201ENST00000410712 136 ntBASIC-9.04□□□□□ -3.86
VPS13AQ96RL7 Y_RNA.216-201ENST00000364205 93 ntBASIC-9.05□□□□□ -3.86
VPS13AQ96RL7 Y_RNA.369-201ENST00000365568 117 ntBASIC-9.06□□□□□ -3.86
VPS13AQ96RL7 RNU6-919P-201ENST00000516731 104 ntBASIC-9.08□□□□□ -3.86
VPS13AQ96RL7 Y_RNA.464-201ENST00000384282 110 ntBASIC-9.08□□□□□ -3.86
VPS13AQ96RL7 MIR5582-201ENST00000579697 68 ntBASIC-9.1□□□□□ -3.87
VPS13AQ96RL7 MIR3908-201ENST00000579798 126 ntBASIC-9.1□□□□□ -3.87
VPS13AQ96RL7 Y_RNA.388-201ENST00000383919 113 ntBASIC-9.13□□□□□ -3.87
VPS13AQ96RL7 RNU6-1154P-201ENST00000391001 104 ntBASIC-9.16□□□□□ -3.88
VPS13AQ96RL7 Y_RNA.193-201ENST00000363979 102 ntBASIC-9.17□□□□□ -3.88
VPS13AQ96RL7 Y_RNA.685-201ENST00000516532 108 ntBASIC-9.18□□□□□ -3.88
VPS13AQ96RL7 SNORD73B-201ENST00000364394 72 ntBASIC-9.22□□□□□ -3.89
VPS13AQ96RL7 MTCYBP9-201ENST00000431021 303 ntBASIC-9.22□□□□□ -3.89
VPS13AQ96RL7 Y_RNA.318-201ENST00000365131 97 ntBASIC-9.24□□□□□ -3.89
VPS13AQ96RL7 RNU6-313P-201ENST00000516317 112 ntBASIC-9.24□□□□□ -3.89
VPS13AQ96RL7 MIR4795-201ENST00000584182 89 ntBASIC-9.26□□□□□ -3.89
VPS13AQ96RL7 RNY4P29-201ENST00000410801 97 ntBASIC-9.28□□□□□ -3.9
VPS13AQ96RL7 MT-TD-201ENST00000387419 68 ntBASIC-9.3□□□□□ -3.9
VPS13AQ96RL7 RNU6-388P-201ENST00000517012 105 ntBASIC-9.32□□□□□ -3.9
VPS13AQ96RL7 RNU6-389P-201ENST00000517048 105 ntBASIC-9.32□□□□□ -3.9
VPS13AQ96RL7 SNORD20-201ENST00000384550 80 ntBASIC-9.32□□□□□ -3.9
VPS13AQ96RL7 MIR568-201ENST00000385036 95 ntBASIC-9.32□□□□□ -3.9
VPS13AQ96RL7 RNU6-1160P-201ENST00000384546 104 ntBASIC-9.34□□□□□ -3.91
VPS13AQ96RL7 AC008737.2-201ENST00000599446 118 ntBASIC-9.36□□□□□ -3.91
VPS13AQ96RL7 RNU6-584P-201ENST00000410350 95 ntBASIC-9.39□□□□□ -3.91
VPS13AQ96RL7 RNU6-215P-201ENST00000365169 102 ntBASIC-9.4□□□□□ -3.91
VPS13AQ96RL7 RNU6-44P-201ENST00000384045 107 ntBASIC-9.4□□□□□ -3.91
VPS13AQ96RL7 AP001094.1-201ENST00000579805 193 ntBASIC-9.43□□□□□ -3.92
VPS13AQ96RL7 Y_RNA.703-201ENST00000516846 111 ntBASIC-9.5□□□□□ -3.93
VPS13AQ96RL7 MTATP6P25-201ENST00000574491 261 ntBASIC-9.55□□□□□ -3.94
VPS13AQ96RL7 RNU4-37P-201ENST00000410214 84 ntBASIC-9.58□□□□□ -3.94
VPS13AQ96RL7 MIR3133-201ENST00000583157 78 ntBASIC-9.59□□□□□ -3.95
VPS13AQ96RL7 MIR620-201ENST00000385232 95 ntBASIC-9.63□□□□□ -3.95
VPS13AQ96RL7 MIR3974-201ENST00000637126 96 ntBASIC-9.65□□□□□ -3.95
VPS13AQ96RL7 MIR1302-4-201ENST00000408701 150 ntBASIC-9.66□□□□□ -3.96
VPS13AQ96RL7 MIR606-201ENST00000384851 96 ntBASIC-9.68□□□□□ -3.96
VPS13AQ96RL7 MIR4503-201ENST00000582187 83 ntBASIC-9.69□□□□□ -3.96
VPS13AQ96RL7 MT-TG-201ENST00000387429 68 ntBASIC-9.73□□□□□ -3.97
VPS13AQ96RL7 MTCYBP6-201ENST00000441810 138 ntBASIC-9.73□□□□□ -3.97
VPS13AQ96RL7 Y_RNA.717-201ENST00000517106 92 ntBASIC-9.74□□□□□ -3.97
VPS13AQ96RL7 Y_RNA.61-201ENST00000362835 102 ntBASIC-9.88□□□□□ -3.99
VPS13AQ96RL7 MIR4719-201ENST00000585233 84 ntBASIC-9.89□□□□□ -3.99
VPS13AQ96RL7 RNU6-738P-201ENST00000384531 106 ntBASIC-9.9□□□□□ -3.99
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms