Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RNU6-300P-201ENST00000459080 104 ntBASIC-1.88□□□□□ -2.71
PDLIM3Q53GG5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
PDLIM3Q53GG5 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
PDLIM3Q53GG5 RNU6-803P-201ENST00000516034 102 ntBASIC-1.9□□□□□ -2.71
PDLIM3Q53GG5 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.92□□□□□ -2.72
PDLIM3Q53GG5 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.92□□□□□ -2.72
PDLIM3Q53GG5 RNU6-742P-201ENST00000365289 107 ntBASIC-1.92□□□□□ -2.72
PDLIM3Q53GG5 MIR548X-201ENST00000580069 75 ntBASIC-1.92□□□□□ -2.72
PDLIM3Q53GG5 RNU6-176P-201ENST00000517196 105 ntBASIC-1.93□□□□□ -2.72
PDLIM3Q53GG5 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.93□□□□□ -2.72
PDLIM3Q53GG5 RNY4P9-201ENST00000363194 97 ntBASIC-1.94□□□□□ -2.72
PDLIM3Q53GG5 RNU6-141P-201ENST00000410499 105 ntBASIC-1.94□□□□□ -2.72
PDLIM3Q53GG5 RNU6-829P-201ENST00000363700 112 ntBASIC-1.96□□□□□ -2.72
PDLIM3Q53GG5 SNORD113-4-201ENST00000364802 75 ntBASIC-1.96□□□□□ -2.72
PDLIM3Q53GG5 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.96□□□□□ -2.72
PDLIM3Q53GG5 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.96□□□□□ -2.72
PDLIM3Q53GG5 MIR1254-1-201ENST00000408257 97 ntBASIC-1.97□□□□□ -2.72
PDLIM3Q53GG5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.99□□□□□ -2.73
PDLIM3Q53GG5 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.02□□□□□ -2.73
PDLIM3Q53GG5 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.04□□□□□ -2.74
PDLIM3Q53GG5 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.04□□□□□ -2.74
PDLIM3Q53GG5 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.06□□□□□ -2.74
PDLIM3Q53GG5 RNU6-345P-201ENST00000517001 107 ntBASIC-2.06□□□□□ -2.74
PDLIM3Q53GG5 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.08□□□□□ -2.74
PDLIM3Q53GG5 RNU4-33P-201ENST00000364316 85 ntBASIC-2.08□□□□□ -2.74
PDLIM3Q53GG5 AC079150.2-201ENST00000443733 78 ntBASIC-2.09□□□□□ -2.74
PDLIM3Q53GG5 AC139453.2-201ENST00000487255 133 ntBASIC-2.09□□□□□ -2.74
PDLIM3Q53GG5 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.1□□□□□ -2.75
PDLIM3Q53GG5 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.1□□□□□ -2.75
PDLIM3Q53GG5 RNU6-230P-201ENST00000362457 104 ntBASIC-2.11□□□□□ -2.75
PDLIM3Q53GG5 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.11□□□□□ -2.75
PDLIM3Q53GG5 RNU6-822P-201ENST00000362707 106 ntBASIC-2.13□□□□□ -2.75
PDLIM3Q53GG5 RNU6-499P-201ENST00000365615 107 ntBASIC-2.14□□□□□ -2.75
PDLIM3Q53GG5 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.15□□□□□ -2.75
PDLIM3Q53GG5 AL731768.1-201ENST00000603124 139 ntBASIC-2.15□□□□□ -2.75
PDLIM3Q53GG5 MIR4317-201ENST00000637586 65 ntBASIC-2.16□□□□□ -2.76
PDLIM3Q53GG5 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.17□□□□□ -2.76
PDLIM3Q53GG5 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.19□□□□□ -2.76
PDLIM3Q53GG5 MIR548H4-201ENST00000408689 111 ntBASIC-2.21□□□□□ -2.76
PDLIM3Q53GG5 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.23□□□□□ -2.77
PDLIM3Q53GG5 RNA5SP224-201ENST00000365069 126 ntBASIC-2.23□□□□□ -2.77
PDLIM3Q53GG5 RNY4P25-201ENST00000459254 96 ntBASIC-2.24□□□□□ -2.77
PDLIM3Q53GG5 MIR5693-201ENST00000577722 73 ntBASIC-2.24□□□□□ -2.77
PDLIM3Q53GG5 MIR548AL-201ENST00000578416 97 ntBASIC-2.24□□□□□ -2.77
PDLIM3Q53GG5 SNORD115.2-201ENST00000391126 59 ntBASIC-2.25□□□□□ -2.77
PDLIM3Q53GG5 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.26□□□□□ -2.77
PDLIM3Q53GG5 RNU6-936P-201ENST00000384005 107 ntBASIC-2.26□□□□□ -2.77
PDLIM3Q53GG5 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.27□□□□□ -2.77
PDLIM3Q53GG5 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.27□□□□□ -2.77
PDLIM3Q53GG5 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.27□□□□□ -2.77
PDLIM3Q53GG5 MIR656-201ENST00000385224 78 ntBASIC-2.27□□□□□ -2.77
PDLIM3Q53GG5 SNORD45C-201ENST00000383893 79 ntBASIC-2.28□□□□□ -2.77
PDLIM3Q53GG5 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.28□□□□□ -2.77
PDLIM3Q53GG5 RNU6-836P-201ENST00000362920 107 ntBASIC-2.29□□□□□ -2.78
PDLIM3Q53GG5 RNU6-737P-201ENST00000365370 107 ntBASIC-2.3□□□□□ -2.78
PDLIM3Q53GG5 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.31□□□□□ -2.78
PDLIM3Q53GG5 RNU6-788P-201ENST00000390967 104 ntBASIC-2.31□□□□□ -2.78
PDLIM3Q53GG5 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.31□□□□□ -2.78
PDLIM3Q53GG5 RNU6-753P-201ENST00000363926 107 ntBASIC-2.32□□□□□ -2.78
PDLIM3Q53GG5 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.32□□□□□ -2.78
PDLIM3Q53GG5 RNU6-614P-201ENST00000384369 107 ntBASIC-2.32□□□□□ -2.78
PDLIM3Q53GG5 U6.59-201ENST00000615686 107 ntBASIC-2.32□□□□□ -2.78
PDLIM3Q53GG5 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.33□□□□□ -2.78
PDLIM3Q53GG5 RNU6-854P-201ENST00000364036 107 ntBASIC-2.33□□□□□ -2.78
PDLIM3Q53GG5 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.33□□□□□ -2.78
PDLIM3Q53GG5 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.34□□□□□ -2.78
PDLIM3Q53GG5 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.35□□□□□ -2.79
PDLIM3Q53GG5 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.35□□□□□ -2.79
PDLIM3Q53GG5 AL359920.1-201ENST00000618332 176 ntBASIC-2.35□□□□□ -2.79
PDLIM3Q53GG5 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.37□□□□□ -2.79
PDLIM3Q53GG5 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.37□□□□□ -2.79
PDLIM3Q53GG5 RNU6-838P-201ENST00000363399 108 ntBASIC-2.38□□□□□ -2.79
PDLIM3Q53GG5 RNU6-808P-201ENST00000391233 108 ntBASIC-2.38□□□□□ -2.79
PDLIM3Q53GG5 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.39□□□□□ -2.79
PDLIM3Q53GG5 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.4□□□□□ -2.79
PDLIM3Q53GG5 RNU6-987P-201ENST00000384759 104 ntBASIC-2.42□□□□□ -2.8
PDLIM3Q53GG5 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.43□□□□□ -2.8
PDLIM3Q53GG5 MIR124-1-201ENST00000385275 85 ntBASIC-2.45□□□□□ -2.8
PDLIM3Q53GG5 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.45□□□□□ -2.8
PDLIM3Q53GG5 SNORD114-13-201ENST00000364377 74 ntBASIC-2.47□□□□□ -2.8
PDLIM3Q53GG5 MIR545-201ENST00000385085 106 ntBASIC-2.47□□□□□ -2.8
PDLIM3Q53GG5 RNU6-986P-201ENST00000363133 102 ntBASIC-2.48□□□□□ -2.81
PDLIM3Q53GG5 RNU6-59P-201ENST00000384787 107 ntBASIC-2.49□□□□□ -2.81
PDLIM3Q53GG5 RNU6-930P-201ENST00000390938 100 ntBASIC-2.49□□□□□ -2.81
PDLIM3Q53GG5 SNORD115-45-201ENST00000391078 81 ntBASIC-2.49□□□□□ -2.81
PDLIM3Q53GG5 MTND4LP19-201ENST00000403051 166 ntBASIC-2.5□□□□□ -2.81
PDLIM3Q53GG5 RNA5SP106-201ENST00000517274 100 ntBASIC-2.5□□□□□ -2.81
PDLIM3Q53GG5 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.52□□□□□ -2.81
PDLIM3Q53GG5 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.53□□□□□ -2.81
PDLIM3Q53GG5 MIR548AH-201ENST00000637109 76 ntBASIC-2.55□□□□□ -2.82
PDLIM3Q53GG5 RNU6-422P-201ENST00000384632 107 ntBASIC-2.57□□□□□ -2.82
PDLIM3Q53GG5 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.58□□□□□ -2.82
PDLIM3Q53GG5 MIR509-1-201ENST00000385265 94 ntBASIC-2.6□□□□□ -2.83
PDLIM3Q53GG5 MIR509-2-201ENST00000390724 91 ntBASIC-2.6□□□□□ -2.83
PDLIM3Q53GG5 MIR548F3-201ENST00000408509 87 ntBASIC-2.6□□□□□ -2.83
PDLIM3Q53GG5 RNY4P10-201ENST00000365571 96 ntBASIC-2.63□□□□□ -2.83
PDLIM3Q53GG5 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.64□□□□□ -2.83
PDLIM3Q53GG5 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.69□□□□□ -2.84
PDLIM3Q53GG5 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.69□□□□□ -2.84
PDLIM3Q53GG5 DLEU2_4.2-201ENST00000616613 58 ntBASIC-2.74□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms