Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU6-634P-201ENST00000459134 106 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 MIR5588-201ENST00000581890 63 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 MIR548BB-201ENST00000626714 66 ntBASIC-0.81□□□□□ -2.54
COL7A1Q02388 Y_RNA.15-201ENST00000362420 102 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 RNU4-85P-201ENST00000364675 123 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 RNU6-327P-201ENST00000516270 127 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.82□□□□□ -2.54
COL7A1Q02388 MIR4679-1-201ENST00000637619 75 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 MIR488-201ENST00000365739 83 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 RNU6-539P-201ENST00000516665 103 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 SNORD78.1-201ENST00000390866 65 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 RNU6-122P-201ENST00000516818 107 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 MIR4712-201ENST00000583750 82 ntBASIC-0.82□□□□□ -2.54
COL7A1Q02388 SNORA25.4-201ENST00000363666 124 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 SNORD116-14-201ENST00000383894 92 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 SNORD116-17-201ENST00000383929 92 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 SNORD116-15-201ENST00000384445 92 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 SNORD20-201ENST00000384550 80 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 SNORD116-19-201ENST00000384729 92 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 AC103706.3-201ENST00000636297 85 ntBASIC-0.83□□□□□ -2.54
COL7A1Q02388 RNY1P5-201ENST00000383890 115 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-32P-201ENST00000383948 107 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-13P-201ENST00000384248 107 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-12P-201ENST00000384604 107 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-41P-201ENST00000384741 107 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNA5SP225-201ENST00000410874 135 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 Y_RNA.165-201ENST00000363721 102 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-871P-201ENST00000516122 100 ntBASIC-0.84□□□□□ -2.54
COL7A1Q02388 RNU6-471P-201ENST00000383944 106 ntBASIC-0.85□□□□□ -2.54
COL7A1Q02388 RNU6-463P-201ENST00000384340 107 ntBASIC-0.85□□□□□ -2.54
COL7A1Q02388 RNU6-242P-201ENST00000384359 107 ntBASIC-0.85□□□□□ -2.55
COL7A1Q02388 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.85□□□□□ -2.55
COL7A1Q02388 RNU6-446P-201ENST00000362827 106 ntBASIC-0.86□□□□□ -2.55
COL7A1Q02388 AC090425.1-201ENST00000610007 140 ntBASIC-0.86□□□□□ -2.55
COL7A1Q02388 IGLL4P-201ENST00000614590 133 ntBASIC-0.86□□□□□ -2.55
COL7A1Q02388 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.87□□□□□ -2.55
COL7A1Q02388 MIR1245B-201ENST00000636115 69 ntBASIC-0.87□□□□□ -2.55
COL7A1Q02388 RNU6-573P-201ENST00000383938 106 ntBASIC-0.87□□□□□ -2.55
COL7A1Q02388 RNU6-44P-201ENST00000384045 107 ntBASIC-0.87□□□□□ -2.55
COL7A1Q02388 MIR548M-201ENST00000408260 86 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 RNA5SP89-201ENST00000410300 108 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 AL606753.1-201ENST00000427435 87 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 RNU6-59P-201ENST00000384787 107 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.88□□□□□ -2.55
COL7A1Q02388 RNU6-836P-201ENST00000362920 107 ntBASIC-0.89□□□□□ -2.55
COL7A1Q02388 MIR3202-2-201ENST00000635980 79 ntBASIC-0.89□□□□□ -2.55
COL7A1Q02388 RNU6-838P-201ENST00000363399 108 ntBASIC-0.89□□□□□ -2.55
COL7A1Q02388 RNU6-753P-201ENST00000363926 107 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 RNU6-215P-201ENST00000365169 102 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 MIR3133-201ENST00000583157 78 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 SNORD30.1-201ENST00000391309 70 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.9□□□□□ -2.55
COL7A1Q02388 RNU6-614P-201ENST00000384369 107 ntBASIC-0.91□□□□□ -2.55
COL7A1Q02388 RNU6-857P-201ENST00000515893 110 ntBASIC-0.91□□□□□ -2.55
COL7A1Q02388 U6.59-201ENST00000615686 107 ntBASIC-0.91□□□□□ -2.55
COL7A1Q02388 RNU6-81P-201ENST00000365608 104 ntBASIC-0.91□□□□□ -2.56
COL7A1Q02388 RNU6-279P-201ENST00000391297 101 ntBASIC-0.91□□□□□ -2.56
COL7A1Q02388 RNU6-485P-201ENST00000363475 107 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 RNU6-794P-201ENST00000517261 64 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 MIR1302-4-201ENST00000408701 150 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 AC114801.3-201ENST00000510231 177 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 RNU6-894P-201ENST00000517094 105 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 MIR3910-1-201ENST00000580936 111 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 MIR4719-201ENST00000585233 84 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 U6.111-201ENST00000636093 83 ntBASIC-0.92□□□□□ -2.56
COL7A1Q02388 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.93□□□□□ -2.56
COL7A1Q02388 RNU6-499P-201ENST00000365615 107 ntBASIC-0.93□□□□□ -2.56
COL7A1Q02388 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.94□□□□□ -2.56
COL7A1Q02388 MIR5582-201ENST00000579697 68 ntBASIC-0.94□□□□□ -2.56
COL7A1Q02388 MIR4662A-201ENST00000637499 67 ntBASIC-0.94□□□□□ -2.56
COL7A1Q02388 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.95□□□□□ -2.56
COL7A1Q02388 MIR450A2-201ENST00000385022 100 ntBASIC-0.95□□□□□ -2.56
COL7A1Q02388 RNU6-313P-201ENST00000516317 112 ntBASIC-0.95□□□□□ -2.56
COL7A1Q02388 SNORD73B-201ENST00000364394 72 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 RNU6-1024P-201ENST00000384199 107 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 MIR548F3-201ENST00000408509 87 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 MIR3671-201ENST00000580455 88 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 RNY4P19-201ENST00000362530 96 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 RNU6-627P-201ENST00000364032 102 ntBASIC-0.96□□□□□ -2.56
COL7A1Q02388 MIR494-201ENST00000349529 81 ntBASIC-0.97□□□□□ -2.56
COL7A1Q02388 RNU6-620P-201ENST00000384017 96 ntBASIC-0.97□□□□□ -2.56
COL7A1Q02388 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.97□□□□□ -2.57
COL7A1Q02388 MTND4LP19-201ENST00000403051 166 ntBASIC-0.97□□□□□ -2.57
COL7A1Q02388 RNU6-936P-201ENST00000384005 107 ntBASIC-0.98□□□□□ -2.57
COL7A1Q02388 AP001094.1-201ENST00000579805 193 ntBASIC-0.98□□□□□ -2.57
COL7A1Q02388 RNU6-153P-201ENST00000364422 104 ntBASIC-0.99□□□□□ -2.57
COL7A1Q02388 AC079150.2-201ENST00000443733 78 ntBASIC-0.99□□□□□ -2.57
COL7A1Q02388 RNU6-133P-201ENST00000383989 107 ntBASIC-0.99□□□□□ -2.57
COL7A1Q02388 SNORD111B-201ENST00000408587 80 ntBASIC-0.99□□□□□ -2.57
COL7A1Q02388 RNU6-930P-201ENST00000390938 100 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms