Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.97□□□□□ -3.04
NUP98P52948 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.97□□□□□ -3.04
NUP98P52948 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.98□□□□□ -3.05
NUP98P52948 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.98□□□□□ -3.05
NUP98P52948 MIR488-201ENST00000365739 83 ntBASIC-3.99□□□□□ -3.05
NUP98P52948 RNU6-209P-201ENST00000384118 107 ntBASIC-4□□□□□ -3.05
NUP98P52948 RNU6-627P-201ENST00000364032 102 ntBASIC-4□□□□□ -3.05
NUP98P52948 RNU6-59P-201ENST00000384787 107 ntBASIC-4.01□□□□□ -3.05
NUP98P52948 AC090425.1-201ENST00000610007 140 ntBASIC-4.02□□□□□ -3.05
NUP98P52948 RNU6-1011P-201ENST00000384668 107 ntBASIC-4.04□□□□□ -3.06
NUP98P52948 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.05□□□□□ -3.06
NUP98P52948 AP001094.1-201ENST00000579805 193 ntBASIC-4.05□□□□□ -3.06
NUP98P52948 RNU6-22P-201ENST00000384355 107 ntBASIC-4.06□□□□□ -3.06
NUP98P52948 Y_RNA.703-201ENST00000516846 111 ntBASIC-4.06□□□□□ -3.06
NUP98P52948 AL365222.1-201ENST00000614661 98 ntBASIC-4.07□□□□□ -3.06
NUP98P52948 RNU6-640P-201ENST00000363693 105 ntBASIC-4.08□□□□□ -3.06
NUP98P52948 RNU6-32P-201ENST00000383948 107 ntBASIC-4.08□□□□□ -3.06
NUP98P52948 RNU6-13P-201ENST00000384248 107 ntBASIC-4.08□□□□□ -3.06
NUP98P52948 RNU6-12P-201ENST00000384604 107 ntBASIC-4.08□□□□□ -3.06
NUP98P52948 RNU6-41P-201ENST00000384741 107 ntBASIC-4.08□□□□□ -3.06
NUP98P52948 RNU6-539P-201ENST00000516665 103 ntBASIC-4.08□□□□□ -3.06
NUP98P52948 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.09□□□□□ -3.06
NUP98P52948 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.1□□□□□ -3.07
NUP98P52948 AC114801.3-201ENST00000510231 177 ntBASIC-4.1□□□□□ -3.07
NUP98P52948 RNU6-446P-201ENST00000362827 106 ntBASIC-4.11□□□□□ -3.07
NUP98P52948 RNU6-81P-201ENST00000365608 104 ntBASIC-4.11□□□□□ -3.07
NUP98P52948 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.14□□□□□ -3.07
NUP98P52948 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-4.14□□□□□ -3.07
NUP98P52948 RNU6-986P-201ENST00000363133 102 ntBASIC-4.14□□□□□ -3.07
NUP98P52948 RNU6-871P-201ENST00000516122 100 ntBASIC-4.14□□□□□ -3.07
NUP98P52948 RNU6-787P-201ENST00000384032 107 ntBASIC-4.15□□□□□ -3.07
NUP98P52948 RNU6-1117P-201ENST00000384525 104 ntBASIC-4.15□□□□□ -3.07
NUP98P52948 MIR4666B-201ENST00000578142 81 ntBASIC-4.16□□□□□ -3.07
NUP98P52948 SNORD113-4-201ENST00000364802 75 ntBASIC-4.16□□□□□ -3.08
NUP98P52948 RNU6-1131P-201ENST00000364955 107 ntBASIC-4.16□□□□□ -3.08
NUP98P52948 MIR3133-201ENST00000583157 78 ntBASIC-4.16□□□□□ -3.08
NUP98P52948 MIR450A2-201ENST00000385022 100 ntBASIC-4.17□□□□□ -3.08
NUP98P52948 RNU6-838P-201ENST00000363399 108 ntBASIC-4.18□□□□□ -3.08
NUP98P52948 U6.111-201ENST00000636093 83 ntBASIC-4.18□□□□□ -3.08
NUP98P52948 RNU6-620P-201ENST00000384017 96 ntBASIC-4.18□□□□□ -3.08
NUP98P52948 RNU6-1276P-201ENST00000365372 104 ntBASIC-4.19□□□□□ -3.08
NUP98P52948 RNU6-471P-201ENST00000383944 106 ntBASIC-4.2□□□□□ -3.08
NUP98P52948 Y_RNA.545-201ENST00000384652 105 ntBASIC-4.21□□□□□ -3.08
NUP98P52948 RNU6-1154P-201ENST00000391001 104 ntBASIC-4.21□□□□□ -3.08
NUP98P52948 RNU6-49P-201ENST00000384256 107 ntBASIC-4.22□□□□□ -3.08
NUP98P52948 SNORD113-1-201ENST00000365321 69 ntBASIC-4.23□□□□□ -3.09
NUP98P52948 RNY4P30-201ENST00000410216 95 ntBASIC-4.24□□□□□ -3.09
NUP98P52948 RNU6-147P-201ENST00000383983 107 ntBASIC-4.25□□□□□ -3.09
NUP98P52948 RNU6-242P-201ENST00000384359 107 ntBASIC-4.27□□□□□ -3.09
NUP98P52948 RNU6-794P-201ENST00000517261 64 ntBASIC-4.29□□□□□ -3.1
NUP98P52948 MIR494-201ENST00000349529 81 ntBASIC-4.33□□□□□ -3.1
NUP98P52948 RNU6-294P-201ENST00000364999 102 ntBASIC-4.34□□□□□ -3.1
NUP98P52948 RNU6-829P-201ENST00000363700 112 ntBASIC-4.36□□□□□ -3.11
NUP98P52948 RNU6-820P-201ENST00000384273 107 ntBASIC-4.38□□□□□ -3.11
NUP98P52948 RNU6-313P-201ENST00000516317 112 ntBASIC-4.39□□□□□ -3.11
NUP98P52948 RNA5SP89-201ENST00000410300 108 ntBASIC-4.39□□□□□ -3.11
NUP98P52948 Y_RNA.386-201ENST00000383913 105 ntBASIC-4.41□□□□□ -3.12
NUP98P52948 RNU6-753P-201ENST00000363926 107 ntBASIC-4.44□□□□□ -3.12
NUP98P52948 RNU6-919P-201ENST00000516731 104 ntBASIC-4.44□□□□□ -3.12
NUP98P52948 MIR633-201ENST00000384821 98 ntBASIC-4.46□□□□□ -3.12
NUP98P52948 MIR548M-201ENST00000408260 86 ntBASIC-4.47□□□□□ -3.13
NUP98P52948 SNORD20-201ENST00000384550 80 ntBASIC-4.49□□□□□ -3.13
NUP98P52948 MIR1255A-201ENST00000408338 113 ntBASIC-4.51□□□□□ -3.13
NUP98P52948 SNORD111B-201ENST00000408587 80 ntBASIC-4.51□□□□□ -3.13
NUP98P52948 RNU6-1091P-201ENST00000363945 107 ntBASIC-4.52□□□□□ -3.13
NUP98P52948 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-4.53□□□□□ -3.13
NUP98P52948 RNU6-153P-201ENST00000364422 104 ntBASIC-4.54□□□□□ -3.14
NUP98P52948 MIR548F3-201ENST00000408509 87 ntBASIC-4.54□□□□□ -3.14
NUP98P52948 SNORA26.2-201ENST00000390922 122 ntBASIC-4.55□□□□□ -3.14
NUP98P52948 RNU6-485P-201ENST00000363475 107 ntBASIC-4.56□□□□□ -3.14
NUP98P52948 RNU6-857P-201ENST00000515893 110 ntBASIC-4.57□□□□□ -3.14
NUP98P52948 U6.103-201ENST00000637085 61 ntBASIC-4.58□□□□□ -3.14
NUP98P52948 RNU6-279P-201ENST00000391297 101 ntBASIC-4.59□□□□□ -3.14
NUP98P52948 RNU6-930P-201ENST00000390938 100 ntBASIC-4.6□□□□□ -3.15
NUP98P52948 MIR4719-201ENST00000585233 84 ntBASIC-4.61□□□□□ -3.15
NUP98P52948 Y_RNA.81-201ENST00000362997 102 ntBASIC-4.62□□□□□ -3.15
NUP98P52948 RNU6-44P-201ENST00000384045 107 ntBASIC-4.62□□□□□ -3.15
NUP98P52948 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.62□□□□□ -3.15
NUP98P52948 MIR3202-2-201ENST00000635980 79 ntBASIC-4.62□□□□□ -3.15
NUP98P52948 RNU6-215P-201ENST00000365169 102 ntBASIC-4.63□□□□□ -3.15
NUP98P52948 MIR3910-1-201ENST00000580936 111 ntBASIC-4.69□□□□□ -3.16
NUP98P52948 RNU6-894P-201ENST00000517094 105 ntBASIC-4.7□□□□□ -3.16
NUP98P52948 Y_RNA.694-201ENST00000516677 117 ntBASIC-4.72□□□□□ -3.16
NUP98P52948 MIR4662A-201ENST00000637499 67 ntBASIC-4.72□□□□□ -3.16
NUP98P52948 RNU6-936P-201ENST00000384005 107 ntBASIC-4.73□□□□□ -3.17
NUP98P52948 RNU6-406P-201ENST00000516470 107 ntBASIC-4.73□□□□□ -3.17
NUP98P52948 DLEU2_4.2-201ENST00000616613 58 ntBASIC-4.73□□□□□ -3.17
NUP98P52948 Y_RNA.369-201ENST00000365568 117 ntBASIC-4.76□□□□□ -3.17
NUP98P52948 RNU6-499P-201ENST00000365615 107 ntBASIC-4.76□□□□□ -3.17
NUP98P52948 AL606753.1-201ENST00000427435 87 ntBASIC-4.78□□□□□ -3.17
NUP98P52948 MIR5582-201ENST00000579697 68 ntBASIC-4.79□□□□□ -3.18
NUP98P52948 AC079150.2-201ENST00000443733 78 ntBASIC-4.82□□□□□ -3.18
NUP98P52948 AC099654.10-201ENST00000640395 161 ntBASIC-4.83□□□□□ -3.18
NUP98P52948 RNU6-573P-201ENST00000383938 106 ntBASIC-4.83□□□□□ -3.18
NUP98P52948 RNU6-892P-201ENST00000410335 99 ntBASIC-4.9□□□□□ -3.19
NUP98P52948 RNU6-614P-201ENST00000384369 107 ntBASIC-4.9□□□□□ -3.19
NUP98P52948 U6.59-201ENST00000615686 107 ntBASIC-4.9□□□□□ -3.19
NUP98P52948 MIR3671-201ENST00000580455 88 ntBASIC-4.92□□□□□ -3.2
NUP98P52948 RNY4P19-201ENST00000362530 96 ntBASIC-4.93□□□□□ -3.2
NUP98P52948 AC125388.1-201ENST00000459631 156 ntBASIC-4.93□□□□□ -3.2
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms