Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.81□□□□□ -2.86
SHOX2O60902 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.81□□□□□ -2.86
SHOX2O60902 AL365222.1-201ENST00000614661 98 ntBASIC-2.81□□□□□ -2.86
SHOX2O60902 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.84□□□□□ -2.86
SHOX2O60902 RNU6-838P-201ENST00000363399 108 ntBASIC-2.85□□□□□ -2.87
SHOX2O60902 RNU6-640P-201ENST00000363693 105 ntBASIC-2.85□□□□□ -2.87
SHOX2O60902 U6.111-201ENST00000636093 83 ntBASIC-2.85□□□□□ -2.87
SHOX2O60902 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.86□□□□□ -2.87
SHOX2O60902 RNU6-539P-201ENST00000516665 103 ntBASIC-2.86□□□□□ -2.87
SHOX2O60902 MIR4666B-201ENST00000578142 81 ntBASIC-2.86□□□□□ -2.87
SHOX2O60902 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.87□□□□□ -2.87
SHOX2O60902 U7.4-201ENST00000614961 63 ntBASIC-2.87□□□□□ -2.87
SHOX2O60902 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.88□□□□□ -2.87
SHOX2O60902 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.88□□□□□ -2.87
SHOX2O60902 MIR3133-201ENST00000583157 78 ntBASIC-2.88□□□□□ -2.87
SHOX2O60902 MIR4679-1-201ENST00000637619 75 ntBASIC-2.89□□□□□ -2.87
SHOX2O60902 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 SNORD113-4-201ENST00000364802 75 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 SNORD30.1-201ENST00000391309 70 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 AC114801.3-201ENST00000510231 177 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 SNORD113-1-201ENST00000365321 69 ntBASIC-2.91□□□□□ -2.88
SHOX2O60902 RNU6-81P-201ENST00000365608 104 ntBASIC-2.93□□□□□ -2.88
SHOX2O60902 IGLL4P-201ENST00000614590 133 ntBASIC-2.93□□□□□ -2.88
SHOX2O60902 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.94□□□□□ -2.88
SHOX2O60902 AC090425.1-201ENST00000610007 140 ntBASIC-2.94□□□□□ -2.88
SHOX2O60902 RNU6-787P-201ENST00000384032 107 ntBASIC-2.95□□□□□ -2.88
SHOX2O60902 RNU6-209P-201ENST00000384118 107 ntBASIC-2.95□□□□□ -2.88
SHOX2O60902 RNU6-871P-201ENST00000516122 100 ntBASIC-2.95□□□□□ -2.88
SHOX2O60902 RNU6-627P-201ENST00000364032 102 ntBASIC-2.97□□□□□ -2.88
SHOX2O60902 RNU6-32P-201ENST00000383948 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-13P-201ENST00000384248 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-12P-201ENST00000384604 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-41P-201ENST00000384741 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-986P-201ENST00000363133 102 ntBASIC-2.99□□□□□ -2.89
SHOX2O60902 RNU6-471P-201ENST00000383944 106 ntBASIC-2.99□□□□□ -2.89
SHOX2O60902 Y_RNA.386-201ENST00000383913 105 ntBASIC-3□□□□□ -2.89
SHOX2O60902 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3□□□□□ -2.89
SHOX2O60902 RNU6-22P-201ENST00000384355 107 ntBASIC-3.01□□□□□ -2.89
SHOX2O60902 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.02□□□□□ -2.89
SHOX2O60902 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.02□□□□□ -2.89
SHOX2O60902 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.02□□□□□ -2.89
SHOX2O60902 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.04□□□□□ -2.9
SHOX2O60902 RNU6-49P-201ENST00000384256 107 ntBASIC-3.05□□□□□ -2.9
SHOX2O60902 MIR548F3-201ENST00000408509 87 ntBASIC-3.05□□□□□ -2.9
SHOX2O60902 RNU6-829P-201ENST00000363700 112 ntBASIC-3.06□□□□□ -2.9
SHOX2O60902 RNU6-620P-201ENST00000384017 96 ntBASIC-3.06□□□□□ -2.9
SHOX2O60902 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.07□□□□□ -2.9
SHOX2O60902 RNU6-147P-201ENST00000383983 107 ntBASIC-3.07□□□□□ -2.9
SHOX2O60902 RNU6-242P-201ENST00000384359 107 ntBASIC-3.07□□□□□ -2.9
SHOX2O60902 MIR494-201ENST00000349529 81 ntBASIC-3.08□□□□□ -2.9
SHOX2O60902 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.09□□□□□ -2.9
SHOX2O60902 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.09□□□□□ -2.9
SHOX2O60902 RNY4P19-201ENST00000362530 96 ntBASIC-3.1□□□□□ -2.91
SHOX2O60902 RNU6-794P-201ENST00000517261 64 ntBASIC-3.1□□□□□ -2.91
SHOX2O60902 RNU6-313P-201ENST00000516317 112 ntBASIC-3.12□□□□□ -2.91
SHOX2O60902 AC099654.10-201ENST00000640395 161 ntBASIC-3.13□□□□□ -2.91
SHOX2O60902 MIR450A2-201ENST00000385022 100 ntBASIC-3.14□□□□□ -2.91
SHOX2O60902 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.15□□□□□ -2.91
SHOX2O60902 RNU6-294P-201ENST00000364999 102 ntBASIC-3.15□□□□□ -2.91
SHOX2O60902 RNU6-820P-201ENST00000384273 107 ntBASIC-3.19□□□□□ -2.92
SHOX2O60902 RNU6-930P-201ENST00000390938 100 ntBASIC-3.19□□□□□ -2.92
SHOX2O60902 RNU6-279P-201ENST00000391297 101 ntBASIC-3.2□□□□□ -2.92
SHOX2O60902 RNU6-406P-201ENST00000516470 107 ntBASIC-3.2□□□□□ -2.92
SHOX2O60902 RNU6-753P-201ENST00000363926 107 ntBASIC-3.21□□□□□ -2.92
SHOX2O60902 AC079150.2-201ENST00000443733 78 ntBASIC-3.21□□□□□ -2.92
SHOX2O60902 RNU6-485P-201ENST00000363475 107 ntBASIC-3.22□□□□□ -2.92
SHOX2O60902 SNORD111B-201ENST00000408587 80 ntBASIC-3.22□□□□□ -2.92
SHOX2O60902 MIR633-201ENST00000384821 98 ntBASIC-3.23□□□□□ -2.93
SHOX2O60902 RNU6-857P-201ENST00000515893 110 ntBASIC-3.25□□□□□ -2.93
SHOX2O60902 MIR4719-201ENST00000585233 84 ntBASIC-3.25□□□□□ -2.93
SHOX2O60902 SNORA26.2-201ENST00000390922 122 ntBASIC-3.26□□□□□ -2.93
SHOX2O60902 RNA5SP89-201ENST00000410300 108 ntBASIC-3.27□□□□□ -2.93
SHOX2O60902 MIR3202-2-201ENST00000635980 79 ntBASIC-3.27□□□□□ -2.93
SHOX2O60902 RNU6-215P-201ENST00000365169 102 ntBASIC-3.29□□□□□ -2.94
SHOX2O60902 RNU6-894P-201ENST00000517094 105 ntBASIC-3.29□□□□□ -2.94
SHOX2O60902 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.32□□□□□ -2.94
SHOX2O60902 RNU6-919P-201ENST00000516731 104 ntBASIC-3.32□□□□□ -2.94
SHOX2O60902 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.32□□□□□ -2.94
SHOX2O60902 RNY4P30-201ENST00000410216 95 ntBASIC-3.33□□□□□ -2.94
SHOX2O60902 RNU6-153P-201ENST00000364422 104 ntBASIC-3.34□□□□□ -2.94
SHOX2O60902 SNORD20-201ENST00000384550 80 ntBASIC-3.34□□□□□ -2.94
SHOX2O60902 MIR548M-201ENST00000408260 86 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 MIR1255A-201ENST00000408338 113 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 MIR3910-1-201ENST00000580936 111 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.4□□□□□ -2.95
SHOX2O60902 RNU6-936P-201ENST00000384005 107 ntBASIC-3.4□□□□□ -2.95
SHOX2O60902 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.42□□□□□ -2.96
SHOX2O60902 U6.103-201ENST00000637085 61 ntBASIC-3.42□□□□□ -2.96
SHOX2O60902 MIR4662A-201ENST00000637499 67 ntBASIC-3.42□□□□□ -2.96
SHOX2O60902 RNU6-499P-201ENST00000365615 107 ntBASIC-3.43□□□□□ -2.96
SHOX2O60902 RNU6-44P-201ENST00000384045 107 ntBASIC-3.43□□□□□ -2.96
SHOX2O60902 RNU6-133P-201ENST00000383989 107 ntBASIC-3.48□□□□□ -2.97
SHOX2O60902 RNU6-892P-201ENST00000410335 99 ntBASIC-3.49□□□□□ -2.97
SHOX2O60902 RNU6-573P-201ENST00000383938 106 ntBASIC-3.53□□□□□ -2.97
SHOX2O60902 MIR3671-201ENST00000580455 88 ntBASIC-3.53□□□□□ -2.97
SHOX2O60902 MT-TR-201ENST00000387439 65 ntBASIC-3.54□□□□□ -2.98
SHOX2O60902 SNORD78.1-201ENST00000390866 65 ntBASIC-3.54□□□□□ -2.98
SHOX2O60902 MIR5582-201ENST00000579697 68 ntBASIC-3.54□□□□□ -2.98
SHOX2O60902 snosnR66.1-201ENST00000391095 99 ntBASIC-3.56□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms