Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 MIR5582-201ENST00000579697 68 ntBASIC-3.67□□□□□ -3
HMGB1P1B2RPK0 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.68□□□□□ -3
HMGB1P1B2RPK0 RNU6-857P-201ENST00000515893 110 ntBASIC-3.68□□□□□ -3
HMGB1P1B2RPK0 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.69□□□□□ -3
HMGB1P1B2RPK0 RNU6-279P-201ENST00000391297 101 ntBASIC-3.73□□□□□ -3.01
HMGB1P1B2RPK0 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.73□□□□□ -3.01
HMGB1P1B2RPK0 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.74□□□□□ -3.01
HMGB1P1B2RPK0 MIR656-201ENST00000385224 78 ntBASIC-3.74□□□□□ -3.01
HMGB1P1B2RPK0 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.75□□□□□ -3.01
HMGB1P1B2RPK0 MIR1255A-201ENST00000408338 113 ntBASIC-3.75□□□□□ -3.01
HMGB1P1B2RPK0 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.76□□□□□ -3.01
HMGB1P1B2RPK0 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.76□□□□□ -3.01
HMGB1P1B2RPK0 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.77□□□□□ -3.01
HMGB1P1B2RPK0 RNA5SP224-201ENST00000365069 126 ntBASIC-3.77□□□□□ -3.01
HMGB1P1B2RPK0 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.78□□□□□ -3.01
HMGB1P1B2RPK0 AL359920.1-201ENST00000618332 176 ntBASIC-3.78□□□□□ -3.01
HMGB1P1B2RPK0 SNORD115.2-201ENST00000391126 59 ntBASIC-3.79□□□□□ -3.02
HMGB1P1B2RPK0 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.81□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-737P-201ENST00000365370 107 ntBASIC-3.81□□□□□ -3.02
HMGB1P1B2RPK0 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.82□□□□□ -3.02
HMGB1P1B2RPK0 SNORD45C-201ENST00000383893 79 ntBASIC-3.82□□□□□ -3.02
HMGB1P1B2RPK0 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.82□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-446P-201ENST00000362827 106 ntBASIC-3.83□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-836P-201ENST00000362920 107 ntBASIC-3.83□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-573P-201ENST00000383938 106 ntBASIC-3.83□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.83□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-987P-201ENST00000384759 104 ntBASIC-3.83□□□□□ -3.02
HMGB1P1B2RPK0 RNU6-471P-201ENST00000383944 106 ntBASIC-3.84□□□□□ -3.02
HMGB1P1B2RPK0 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.85□□□□□ -3.03
HMGB1P1B2RPK0 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.86□□□□□ -3.03
HMGB1P1B2RPK0 MIR548H4-201ENST00000408689 111 ntBASIC-3.86□□□□□ -3.03
HMGB1P1B2RPK0 AC114801.3-201ENST00000510231 177 ntBASIC-3.86□□□□□ -3.03
HMGB1P1B2RPK0 MIR548AL-201ENST00000578416 97 ntBASIC-3.86□□□□□ -3.03
HMGB1P1B2RPK0 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.87□□□□□ -3.03
HMGB1P1B2RPK0 SNORD73B-201ENST00000364394 72 ntBASIC-3.89□□□□□ -3.03
HMGB1P1B2RPK0 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.89□□□□□ -3.03
HMGB1P1B2RPK0 RNU4-33P-201ENST00000364316 85 ntBASIC-3.9□□□□□ -3.03
HMGB1P1B2RPK0 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.9□□□□□ -3.03
HMGB1P1B2RPK0 MIR509-1-201ENST00000385265 94 ntBASIC-3.91□□□□□ -3.04
HMGB1P1B2RPK0 MIR509-2-201ENST00000390724 91 ntBASIC-3.91□□□□□ -3.04
HMGB1P1B2RPK0 AL603908.1-201ENST00000406098 201 ntBASIC-3.91□□□□□ -3.04
HMGB1P1B2RPK0 RNU6-776P-201ENST00000364403 104 ntBASIC-3.92□□□□□ -3.04
HMGB1P1B2RPK0 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.92□□□□□ -3.04
HMGB1P1B2RPK0 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.93□□□□□ -3.04
HMGB1P1B2RPK0 RNA5SP106-201ENST00000517274 100 ntBASIC-3.93□□□□□ -3.04
HMGB1P1B2RPK0 RNU6-854P-201ENST00000364036 107 ntBASIC-3.94□□□□□ -3.04
HMGB1P1B2RPK0 SNORA26.2-201ENST00000390922 122 ntBASIC-3.94□□□□□ -3.04
HMGB1P1B2RPK0 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.94□□□□□ -3.04
HMGB1P1B2RPK0 RNY4P29-201ENST00000410801 97 ntBASIC-3.94□□□□□ -3.04
HMGB1P1B2RPK0 MIR4662A-201ENST00000637499 67 ntBASIC-3.95□□□□□ -3.04
HMGB1P1B2RPK0 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.96□□□□□ -3.04
HMGB1P1B2RPK0 SNORD78.1-201ENST00000390866 65 ntBASIC-3.97□□□□□ -3.04
HMGB1P1B2RPK0 RNA5SP225-201ENST00000410874 135 ntBASIC-3.97□□□□□ -3.04
HMGB1P1B2RPK0 SNORD114-13-201ENST00000364377 74 ntBASIC-3.98□□□□□ -3.05
HMGB1P1B2RPK0 SNORD113-4-201ENST00000364802 75 ntBASIC-3.98□□□□□ -3.05
HMGB1P1B2RPK0 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.99□□□□□ -3.05
HMGB1P1B2RPK0 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.02□□□□□ -3.05
HMGB1P1B2RPK0 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.03□□□□□ -3.05
HMGB1P1B2RPK0 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.03□□□□□ -3.05
HMGB1P1B2RPK0 RNY4P10-201ENST00000365571 96 ntBASIC-4.05□□□□□ -3.06
HMGB1P1B2RPK0 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.05□□□□□ -3.06
HMGB1P1B2RPK0 RNU6-808P-201ENST00000391233 108 ntBASIC-4.05□□□□□ -3.06
HMGB1P1B2RPK0 RNA5SP170-201ENST00000517150 101 ntBASIC-4.05□□□□□ -3.06
HMGB1P1B2RPK0 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.06□□□□□ -3.06
HMGB1P1B2RPK0 RNU6-829P-201ENST00000363700 112 ntBASIC-4.09□□□□□ -3.06
HMGB1P1B2RPK0 MIR633-201ENST00000384821 98 ntBASIC-4.12□□□□□ -3.07
HMGB1P1B2RPK0 RNU6-1298P-201ENST00000362456 101 ntBASIC-4.13□□□□□ -3.07
HMGB1P1B2RPK0 MIR124-1-201ENST00000385275 85 ntBASIC-4.14□□□□□ -3.07
HMGB1P1B2RPK0 SNORD115-45-201ENST00000391078 81 ntBASIC-4.14□□□□□ -3.07
HMGB1P1B2RPK0 RNU6-838P-201ENST00000363399 108 ntBASIC-4.17□□□□□ -3.08
HMGB1P1B2RPK0 U2.22-201ENST00000636441 106 ntBASIC-4.17□□□□□ -3.08
HMGB1P1B2RPK0 RNU6-788P-201ENST00000390967 104 ntBASIC-4.18□□□□□ -3.08
HMGB1P1B2RPK0 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.2□□□□□ -3.08
HMGB1P1B2RPK0 RNU6-422P-201ENST00000384632 107 ntBASIC-4.22□□□□□ -3.08
HMGB1P1B2RPK0 MIR545-201ENST00000385085 106 ntBASIC-4.22□□□□□ -3.08
HMGB1P1B2RPK0 MIR548AH-201ENST00000637109 76 ntBASIC-4.27□□□□□ -3.09
HMGB1P1B2RPK0 MIR1302-4-201ENST00000408701 150 ntBASIC-4.28□□□□□ -3.09
HMGB1P1B2RPK0 RNU6-59P-201ENST00000384787 107 ntBASIC-4.29□□□□□ -3.1
HMGB1P1B2RPK0 AC079150.2-201ENST00000443733 78 ntBASIC-4.31□□□□□ -3.1
HMGB1P1B2RPK0 Y_RNA.685-201ENST00000516532 108 ntBASIC-4.32□□□□□ -3.1
HMGB1P1B2RPK0 RNU6-986P-201ENST00000363133 102 ntBASIC-4.37□□□□□ -3.11
HMGB1P1B2RPK0 AC125388.1-201ENST00000459631 156 ntBASIC-4.38□□□□□ -3.11
HMGB1P1B2RPK0 RNU6-753P-201ENST00000363926 107 ntBASIC-4.4□□□□□ -3.11
HMGB1P1B2RPK0 Y_RNA.520-201ENST00000384556 102 ntBASIC-4.41□□□□□ -3.12
HMGB1P1B2RPK0 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.45□□□□□ -3.12
HMGB1P1B2RPK0 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.49□□□□□ -3.13
HMGB1P1B2RPK0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-4.49□□□□□ -3.13
HMGB1P1B2RPK0 RNU6-930P-201ENST00000390938 100 ntBASIC-4.49□□□□□ -3.13
HMGB1P1B2RPK0 RNU6-499P-201ENST00000365615 107 ntBASIC-4.51□□□□□ -3.13
HMGB1P1B2RPK0 RNU6-936P-201ENST00000384005 107 ntBASIC-4.51□□□□□ -3.13
HMGB1P1B2RPK0 RNU6-665P-201ENST00000384639 107 ntBASIC-4.54□□□□□ -3.14
HMGB1P1B2RPK0 MIR548F3-201ENST00000408509 87 ntBASIC-4.54□□□□□ -3.14
HMGB1P1B2RPK0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-4.54□□□□□ -3.14
HMGB1P1B2RPK0 RNU6-1275P-201ENST00000391087 107 ntBASIC-4.55□□□□□ -3.14
HMGB1P1B2RPK0 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.71□□□□□ -3.16
HMGB1P1B2RPK0 RNU6-614P-201ENST00000384369 107 ntBASIC-4.79□□□□□ -3.18
HMGB1P1B2RPK0 U6.59-201ENST00000615686 107 ntBASIC-4.79□□□□□ -3.18
HMGB1P1B2RPK0 DLEU2_4.2-201ENST00000616613 58 ntBASIC-4.83□□□□□ -3.18
HMGB1P1B2RPK0 RNU4-85P-201ENST00000364675 123 ntBASIC-4.87□□□□□ -3.19
HMGB1P1B2RPK0 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.88□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms