Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.85□□□□□ -2.71
DDX56Q9NY93 RNU6-446P-201ENST00000362827 106 ntBASIC-1.88□□□□□ -2.71
DDX56Q9NY93 RNU6-400P-201ENST00000391173 106 ntBASIC-1.88□□□□□ -2.71
DDX56Q9NY93 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
DDX56Q9NY93 AL451105.1-201ENST00000450005 189 ntBASIC-1.89□□□□□ -2.71
DDX56Q9NY93 RNU6-983P-201ENST00000516004 103 ntBASIC-1.89□□□□□ -2.71
DDX56Q9NY93 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.89□□□□□ -2.71
DDX56Q9NY93 RNY4P27-201ENST00000363341 96 ntBASIC-1.9□□□□□ -2.71
DDX56Q9NY93 SNORD45.2-201ENST00000363552 72 ntBASIC-1.9□□□□□ -2.71
DDX56Q9NY93 RNA5SP86-201ENST00000390869 98 ntBASIC-1.9□□□□□ -2.71
DDX56Q9NY93 RNU6-419P-201ENST00000517030 63 ntBASIC-1.91□□□□□ -2.72
DDX56Q9NY93 RNU6-530P-201ENST00000391180 107 ntBASIC-1.93□□□□□ -2.72
DDX56Q9NY93 U6.97-201ENST00000636904 101 ntBASIC-1.94□□□□□ -2.72
DDX56Q9NY93 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.95□□□□□ -2.72
DDX56Q9NY93 MIR633-201ENST00000384821 98 ntBASIC-1.95□□□□□ -2.72
DDX56Q9NY93 MIR548H1-201ENST00000408610 102 ntBASIC-1.95□□□□□ -2.72
DDX56Q9NY93 AC139453.2-201ENST00000487255 133 ntBASIC-1.95□□□□□ -2.72
DDX56Q9NY93 MIR1207-201ENST00000408249 87 ntBASIC-1.96□□□□□ -2.72
DDX56Q9NY93 MIR202-201ENST00000362219 110 ntBASIC-1.97□□□□□ -2.72
DDX56Q9NY93 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.98□□□□□ -2.73
DDX56Q9NY93 SNORD18.1-201ENST00000363807 70 ntBASIC-1.99□□□□□ -2.73
DDX56Q9NY93 SNORD60-201ENST00000383903 83 ntBASIC-2□□□□□ -2.73
DDX56Q9NY93 RNU6-829P-201ENST00000363700 112 ntBASIC-2.01□□□□□ -2.73
DDX56Q9NY93 MIR548X-201ENST00000580069 75 ntBASIC-2.01□□□□□ -2.73
DDX56Q9NY93 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.02□□□□□ -2.73
DDX56Q9NY93 RNU6-361P-201ENST00000364454 107 ntBASIC-2.02□□□□□ -2.73
DDX56Q9NY93 SNORA17.4-201ENST00000391287 132 ntBASIC-2.03□□□□□ -2.73
DDX56Q9NY93 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.04□□□□□ -2.74
DDX56Q9NY93 SNORD113-4-201ENST00000364802 75 ntBASIC-2.04□□□□□ -2.74
DDX56Q9NY93 MIR487B-201ENST00000385021 84 ntBASIC-2.04□□□□□ -2.74
DDX56Q9NY93 RNU6-695P-201ENST00000391157 104 ntBASIC-2.04□□□□□ -2.74
DDX56Q9NY93 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.06□□□□□ -2.74
DDX56Q9NY93 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.06□□□□□ -2.74
DDX56Q9NY93 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.07□□□□□ -2.74
DDX56Q9NY93 MIR548N-201ENST00000408742 75 ntBASIC-2.09□□□□□ -2.74
DDX56Q9NY93 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.09□□□□□ -2.74
DDX56Q9NY93 MIR4426-201ENST00000640330 63 ntBASIC-2.09□□□□□ -2.74
DDX56Q9NY93 SNORD18C-201ENST00000362704 69 ntBASIC-2.12□□□□□ -2.75
DDX56Q9NY93 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.12□□□□□ -2.75
DDX56Q9NY93 MIR581-201ENST00000384895 96 ntBASIC-2.12□□□□□ -2.75
DDX56Q9NY93 AC079150.2-201ENST00000443733 78 ntBASIC-2.12□□□□□ -2.75
DDX56Q9NY93 MIR3123-201ENST00000583417 75 ntBASIC-2.12□□□□□ -2.75
DDX56Q9NY93 MIR496-201ENST00000385226 102 ntBASIC-2.13□□□□□ -2.75
DDX56Q9NY93 RNU6-119P-201ENST00000364882 107 ntBASIC-2.14□□□□□ -2.75
DDX56Q9NY93 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.14□□□□□ -2.75
DDX56Q9NY93 RNU6-499P-201ENST00000365615 107 ntBASIC-2.15□□□□□ -2.75
DDX56Q9NY93 RNU6-118P-201ENST00000516552 102 ntBASIC-2.15□□□□□ -2.75
DDX56Q9NY93 RNU6-841P-201ENST00000383872 107 ntBASIC-2.16□□□□□ -2.76
DDX56Q9NY93 AC108019.1-201ENST00000512540 175 ntBASIC-2.16□□□□□ -2.76
DDX56Q9NY93 RNU6-742P-201ENST00000365289 107 ntBASIC-2.17□□□□□ -2.76
DDX56Q9NY93 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.17□□□□□ -2.76
DDX56Q9NY93 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.17□□□□□ -2.76
DDX56Q9NY93 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.18□□□□□ -2.76
DDX56Q9NY93 RNU6-300P-201ENST00000459080 104 ntBASIC-2.19□□□□□ -2.76
DDX56Q9NY93 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.19□□□□□ -2.76
DDX56Q9NY93 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.2□□□□□ -2.76
DDX56Q9NY93 MIR548AM-201ENST00000584298 74 ntBASIC-2.2□□□□□ -2.76
DDX56Q9NY93 RNU4-33P-201ENST00000364316 85 ntBASIC-2.22□□□□□ -2.76
DDX56Q9NY93 RNU6-788P-201ENST00000390967 104 ntBASIC-2.22□□□□□ -2.76
DDX56Q9NY93 RNU6-176P-201ENST00000517196 105 ntBASIC-2.23□□□□□ -2.77
DDX56Q9NY93 MIR4756-201ENST00000577874 78 ntBASIC-2.23□□□□□ -2.77
DDX56Q9NY93 RNU6-980P-201ENST00000516925 103 ntBASIC-2.25□□□□□ -2.77
DDX56Q9NY93 MIR664B-201ENST00000626756 61 ntBASIC-2.27□□□□□ -2.77
DDX56Q9NY93 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.29□□□□□ -2.78
DDX56Q9NY93 RNU4-88P-201ENST00000411220 86 ntBASIC-2.31□□□□□ -2.78
DDX56Q9NY93 MIR3139-201ENST00000579145 76 ntBASIC-2.33□□□□□ -2.78
DDX56Q9NY93 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.34□□□□□ -2.78
DDX56Q9NY93 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.35□□□□□ -2.79
DDX56Q9NY93 SNORD54-201ENST00000459159 67 ntBASIC-2.35□□□□□ -2.79
DDX56Q9NY93 MIR379-201ENST00000362218 67 ntBASIC-2.36□□□□□ -2.79
DDX56Q9NY93 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.36□□□□□ -2.79
DDX56Q9NY93 MIR548W-201ENST00000581970 74 ntBASIC-2.36□□□□□ -2.79
DDX56Q9NY93 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.36□□□□□ -2.79
DDX56Q9NY93 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.37□□□□□ -2.79
DDX56Q9NY93 snoU13.10-201ENST00000459301 103 ntBASIC-2.37□□□□□ -2.79
DDX56Q9NY93 RNU6-68P-201ENST00000516576 104 ntBASIC-2.38□□□□□ -2.79
DDX56Q9NY93 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.38□□□□□ -2.79
DDX56Q9NY93 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.39□□□□□ -2.79
DDX56Q9NY93 MT-TM-201ENST00000387377 68 ntBASIC-2.4□□□□□ -2.79
DDX56Q9NY93 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.4□□□□□ -2.79
DDX56Q9NY93 RNA5SP93-201ENST00000362525 114 ntBASIC-2.41□□□□□ -2.8
DDX56Q9NY93 RNA5SP405-201ENST00000363059 114 ntBASIC-2.42□□□□□ -2.8
DDX56Q9NY93 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.42□□□□□ -2.8
DDX56Q9NY93 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.43□□□□□ -2.8
DDX56Q9NY93 MIR548AL-201ENST00000578416 97 ntBASIC-2.43□□□□□ -2.8
DDX56Q9NY93 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.44□□□□□ -2.8
DDX56Q9NY93 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.44□□□□□ -2.8
DDX56Q9NY93 RNU6-912P-201ENST00000363800 104 ntBASIC-2.45□□□□□ -2.8
DDX56Q9NY93 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.45□□□□□ -2.8
DDX56Q9NY93 RNU6-936P-201ENST00000384005 107 ntBASIC-2.46□□□□□ -2.8
DDX56Q9NY93 RNU6-614P-201ENST00000384369 107 ntBASIC-2.46□□□□□ -2.8
DDX56Q9NY93 U6.59-201ENST00000615686 107 ntBASIC-2.46□□□□□ -2.8
DDX56Q9NY93 MIR4317-201ENST00000637586 65 ntBASIC-2.47□□□□□ -2.8
DDX56Q9NY93 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.48□□□□□ -2.81
DDX56Q9NY93 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.49□□□□□ -2.81
DDX56Q9NY93 RNU6-194P-201ENST00000363862 105 ntBASIC-2.5□□□□□ -2.81
DDX56Q9NY93 RNY4P7-201ENST00000364600 96 ntBASIC-2.51□□□□□ -2.81
DDX56Q9NY93 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.52□□□□□ -2.81
DDX56Q9NY93 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.52□□□□□ -2.81
DDX56Q9NY93 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms