Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC018880.2-201ENST00000414265 201 ntBASIC-1.27□□□□□ -2.61
RLIMQ9NVW2 MIR4770-201ENST00000579149 58 ntBASIC-1.28□□□□□ -2.61
RLIMQ9NVW2 MIR23C-201ENST00000579846 100 ntBASIC-1.28□□□□□ -2.61
RLIMQ9NVW2 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.31□□□□□ -2.62
RLIMQ9NVW2 RNU6-499P-201ENST00000365615 107 ntBASIC-1.31□□□□□ -2.62
RLIMQ9NVW2 RNY3P8-201ENST00000411366 126 ntBASIC-1.32□□□□□ -2.62
RLIMQ9NVW2 AC079150.2-201ENST00000443733 78 ntBASIC-1.32□□□□□ -2.62
RLIMQ9NVW2 AL451105.1-201ENST00000450005 189 ntBASIC-1.32□□□□□ -2.62
RLIMQ9NVW2 SNORD45.2-201ENST00000363552 72 ntBASIC-1.33□□□□□ -2.62
RLIMQ9NVW2 RNU6-419P-201ENST00000517030 63 ntBASIC-1.33□□□□□ -2.62
RLIMQ9NVW2 SNORD113-4-201ENST00000364802 75 ntBASIC-1.34□□□□□ -2.62
RLIMQ9NVW2 RNA5SP86-201ENST00000390869 98 ntBASIC-1.34□□□□□ -2.62
RLIMQ9NVW2 AC120024.2-201ENST00000576526 175 ntBASIC-1.34□□□□□ -2.62
RLIMQ9NVW2 RNU6-530P-201ENST00000391180 107 ntBASIC-1.35□□□□□ -2.63
RLIMQ9NVW2 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.36□□□□□ -2.63
RLIMQ9NVW2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.36□□□□□ -2.63
RLIMQ9NVW2 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.37□□□□□ -2.63
RLIMQ9NVW2 MIR487B-201ENST00000385021 84 ntBASIC-1.37□□□□□ -2.63
RLIMQ9NVW2 MIR548H1-201ENST00000408610 102 ntBASIC-1.38□□□□□ -2.63
RLIMQ9NVW2 RNU6-983P-201ENST00000516004 103 ntBASIC-1.38□□□□□ -2.63
RLIMQ9NVW2 RNU6-563P-201ENST00000364872 108 ntBASIC-1.39□□□□□ -2.63
RLIMQ9NVW2 RNU6-119P-201ENST00000364882 107 ntBASIC-1.39□□□□□ -2.63
RLIMQ9NVW2 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.39□□□□□ -2.63
RLIMQ9NVW2 MIR548X-201ENST00000580069 75 ntBASIC-1.39□□□□□ -2.63
RLIMQ9NVW2 SNORD18.1-201ENST00000363807 70 ntBASIC-1.4□□□□□ -2.63
RLIMQ9NVW2 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.4□□□□□ -2.63
RLIMQ9NVW2 MIR202-201ENST00000362219 110 ntBASIC-1.41□□□□□ -2.64
RLIMQ9NVW2 U6.97-201ENST00000636904 101 ntBASIC-1.43□□□□□ -2.64
RLIMQ9NVW2 AC013734.1-201ENST00000619329 111 ntBASIC-1.44□□□□□ -2.64
RLIMQ9NVW2 RNY4P7-201ENST00000364600 96 ntBASIC-1.45□□□□□ -2.64
RLIMQ9NVW2 RNU6-79P-201ENST00000362511 107 ntBASIC-1.47□□□□□ -2.64
RLIMQ9NVW2 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.49□□□□□ -2.65
RLIMQ9NVW2 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.49□□□□□ -2.65
RLIMQ9NVW2 SNORD60-201ENST00000383903 83 ntBASIC-1.49□□□□□ -2.65
RLIMQ9NVW2 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.5□□□□□ -2.65
RLIMQ9NVW2 RNU6-400P-201ENST00000391173 106 ntBASIC-1.5□□□□□ -2.65
RLIMQ9NVW2 AC108019.1-201ENST00000512540 175 ntBASIC-1.5□□□□□ -2.65
RLIMQ9NVW2 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.5□□□□□ -2.65
RLIMQ9NVW2 MIR4426-201ENST00000640330 63 ntBASIC-1.5□□□□□ -2.65
RLIMQ9NVW2 RNU4-33P-201ENST00000364316 85 ntBASIC-1.52□□□□□ -2.65
RLIMQ9NVW2 RNU6-614P-201ENST00000384369 107 ntBASIC-1.52□□□□□ -2.65
RLIMQ9NVW2 SNORA17.4-201ENST00000391287 132 ntBASIC-1.52□□□□□ -2.65
RLIMQ9NVW2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.52□□□□□ -2.65
RLIMQ9NVW2 MIR4756-201ENST00000577874 78 ntBASIC-1.52□□□□□ -2.65
RLIMQ9NVW2 U6.59-201ENST00000615686 107 ntBASIC-1.52□□□□□ -2.65
RLIMQ9NVW2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.54□□□□□ -2.66
RLIMQ9NVW2 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.54□□□□□ -2.66
RLIMQ9NVW2 RNU6-361P-201ENST00000364454 107 ntBASIC-1.55□□□□□ -2.66
RLIMQ9NVW2 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.55□□□□□ -2.66
RLIMQ9NVW2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.55□□□□□ -2.66
RLIMQ9NVW2 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.57□□□□□ -2.66
RLIMQ9NVW2 RNU6-936P-201ENST00000384005 107 ntBASIC-1.57□□□□□ -2.66
RLIMQ9NVW2 MIR496-201ENST00000385226 102 ntBASIC-1.57□□□□□ -2.66
RLIMQ9NVW2 RNU6-695P-201ENST00000391157 104 ntBASIC-1.58□□□□□ -2.66
RLIMQ9NVW2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.58□□□□□ -2.66
RLIMQ9NVW2 MIR664B-201ENST00000626756 61 ntBASIC-1.58□□□□□ -2.66
RLIMQ9NVW2 RNU6-742P-201ENST00000365289 107 ntBASIC-1.6□□□□□ -2.67
RLIMQ9NVW2 RNU6-300P-201ENST00000459080 104 ntBASIC-1.6□□□□□ -2.67
RLIMQ9NVW2 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.61□□□□□ -2.67
RLIMQ9NVW2 MTND4LP19-201ENST00000403051 166 ntBASIC-1.61□□□□□ -2.67
RLIMQ9NVW2 MIR3123-201ENST00000583417 75 ntBASIC-1.61□□□□□ -2.67
RLIMQ9NVW2 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.62□□□□□ -2.67
RLIMQ9NVW2 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.62□□□□□ -2.67
RLIMQ9NVW2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.62□□□□□ -2.67
RLIMQ9NVW2 MIR548N-201ENST00000408742 75 ntBASIC-1.63□□□□□ -2.67
RLIMQ9NVW2 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.64□□□□□ -2.67
RLIMQ9NVW2 SNORD54-201ENST00000459159 67 ntBASIC-1.64□□□□□ -2.67
RLIMQ9NVW2 MIR548AM-201ENST00000584298 74 ntBASIC-1.64□□□□□ -2.67
RLIMQ9NVW2 MIR3139-201ENST00000579145 76 ntBASIC-1.65□□□□□ -2.67
RLIMQ9NVW2 SNORD18C-201ENST00000362704 69 ntBASIC-1.66□□□□□ -2.68
RLIMQ9NVW2 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.66□□□□□ -2.68
RLIMQ9NVW2 RNU6-841P-201ENST00000383872 107 ntBASIC-1.66□□□□□ -2.68
RLIMQ9NVW2 RNU4-88P-201ENST00000411220 86 ntBASIC-1.66□□□□□ -2.68
RLIMQ9NVW2 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.67□□□□□ -2.68
RLIMQ9NVW2 MIR581-201ENST00000384895 96 ntBASIC-1.68□□□□□ -2.68
RLIMQ9NVW2 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.69□□□□□ -2.68
RLIMQ9NVW2 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.69□□□□□ -2.68
RLIMQ9NVW2 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.69□□□□□ -2.68
RLIMQ9NVW2 RNA5SP405-201ENST00000363059 114 ntBASIC-1.7□□□□□ -2.68
RLIMQ9NVW2 RNU6-176P-201ENST00000517196 105 ntBASIC-1.7□□□□□ -2.68
RLIMQ9NVW2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
RLIMQ9NVW2 RNU6-753P-201ENST00000363926 107 ntBASIC-1.71□□□□□ -2.68
RLIMQ9NVW2 MT-TM-201ENST00000387377 68 ntBASIC-1.71□□□□□ -2.68
RLIMQ9NVW2 RNU6-194P-201ENST00000363862 105 ntBASIC-1.73□□□□□ -2.69
RLIMQ9NVW2 RNU6-808P-201ENST00000391233 108 ntBASIC-1.73□□□□□ -2.69
RLIMQ9NVW2 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.73□□□□□ -2.69
RLIMQ9NVW2 MIR548AL-201ENST00000578416 97 ntBASIC-1.75□□□□□ -2.69
RLIMQ9NVW2 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.75□□□□□ -2.69
RLIMQ9NVW2 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.76□□□□□ -2.69
RLIMQ9NVW2 RNY4-201ENST00000516507 96 ntBASIC-1.76□□□□□ -2.69
RLIMQ9NVW2 MIR548W-201ENST00000581970 74 ntBASIC-1.77□□□□□ -2.69
RLIMQ9NVW2 snoU13.10-201ENST00000459301 103 ntBASIC-1.78□□□□□ -2.69
RLIMQ9NVW2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.8□□□□□ -2.7
RLIMQ9NVW2 MIR4317-201ENST00000637586 65 ntBASIC-1.8□□□□□ -2.7
RLIMQ9NVW2 RNA5SP93-201ENST00000362525 114 ntBASIC-1.81□□□□□ -2.7
RLIMQ9NVW2 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.82□□□□□ -2.7
RLIMQ9NVW2 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.82□□□□□ -2.7
RLIMQ9NVW2 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.82□□□□□ -2.7
RLIMQ9NVW2 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.83□□□□□ -2.7
RLIMQ9NVW2 RNU6-838P-201ENST00000363399 108 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms