Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU6-828P-201ENST00000364876 107 ntBASIC-2.04□□□□□ -2.74
SMC4Q9NTJ3 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.04□□□□□ -2.74
SMC4Q9NTJ3 RNU6-695P-201ENST00000391157 104 ntBASIC-2.04□□□□□ -2.74
SMC4Q9NTJ3 MIR466-201ENST00000580653 84 ntBASIC-2.04□□□□□ -2.74
SMC4Q9NTJ3 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.05□□□□□ -2.74
SMC4Q9NTJ3 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.05□□□□□ -2.74
SMC4Q9NTJ3 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.05□□□□□ -2.74
SMC4Q9NTJ3 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.05□□□□□ -2.74
SMC4Q9NTJ3 MIR496-201ENST00000385226 102 ntBASIC-2.06□□□□□ -2.74
SMC4Q9NTJ3 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.06□□□□□ -2.74
SMC4Q9NTJ3 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.07□□□□□ -2.74
SMC4Q9NTJ3 MIR3938-201ENST00000582157 103 ntBASIC-2.07□□□□□ -2.74
SMC4Q9NTJ3 RNU6-520P-201ENST00000384717 104 ntBASIC-2.08□□□□□ -2.74
SMC4Q9NTJ3 AC110620.1-201ENST00000416042 228 ntBASIC-2.08□□□□□ -2.74
SMC4Q9NTJ3 MIR3123-201ENST00000583417 75 ntBASIC-2.08□□□□□ -2.74
SMC4Q9NTJ3 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.09□□□□□ -2.74
SMC4Q9NTJ3 RNU7-119P-201ENST00000459279 63 ntBASIC-2.09□□□□□ -2.74
SMC4Q9NTJ3 U6.97-201ENST00000636904 101 ntBASIC-2.09□□□□□ -2.74
SMC4Q9NTJ3 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.12□□□□□ -2.75
SMC4Q9NTJ3 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.13□□□□□ -2.75
SMC4Q9NTJ3 MIR548AM-201ENST00000584298 74 ntBASIC-2.14□□□□□ -2.75
SMC4Q9NTJ3 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.15□□□□□ -2.75
SMC4Q9NTJ3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
SMC4Q9NTJ3 RNU4-88P-201ENST00000411220 86 ntBASIC-2.15□□□□□ -2.75
SMC4Q9NTJ3 AC114801.3-201ENST00000510231 177 ntBASIC-2.15□□□□□ -2.75
SMC4Q9NTJ3 RNU6-980P-201ENST00000516925 103 ntBASIC-2.15□□□□□ -2.75
SMC4Q9NTJ3 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.17□□□□□ -2.76
SMC4Q9NTJ3 MIR664B-201ENST00000626756 61 ntBASIC-2.17□□□□□ -2.76
SMC4Q9NTJ3 MIR202-201ENST00000362219 110 ntBASIC-2.18□□□□□ -2.76
SMC4Q9NTJ3 RNU6-841P-201ENST00000383872 107 ntBASIC-2.18□□□□□ -2.76
SMC4Q9NTJ3 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.19□□□□□ -2.76
SMC4Q9NTJ3 RNU6-471P-201ENST00000383944 106 ntBASIC-2.2□□□□□ -2.76
SMC4Q9NTJ3 MIR581-201ENST00000384895 96 ntBASIC-2.21□□□□□ -2.76
SMC4Q9NTJ3 RNU6-530P-201ENST00000391180 107 ntBASIC-2.21□□□□□ -2.76
SMC4Q9NTJ3 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.22□□□□□ -2.76
SMC4Q9NTJ3 RNY4P7-201ENST00000364600 96 ntBASIC-2.23□□□□□ -2.77
SMC4Q9NTJ3 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.23□□□□□ -2.77
SMC4Q9NTJ3 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.23□□□□□ -2.77
SMC4Q9NTJ3 AL451105.1-201ENST00000450005 189 ntBASIC-2.23□□□□□ -2.77
SMC4Q9NTJ3 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.24□□□□□ -2.77
SMC4Q9NTJ3 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.24□□□□□ -2.77
SMC4Q9NTJ3 RNU6-118P-201ENST00000516552 102 ntBASIC-2.24□□□□□ -2.77
SMC4Q9NTJ3 snoU13.10-201ENST00000459301 103 ntBASIC-2.25□□□□□ -2.77
SMC4Q9NTJ3 MIR548W-201ENST00000581970 74 ntBASIC-2.26□□□□□ -2.77
SMC4Q9NTJ3 RNU6-419P-201ENST00000517030 63 ntBASIC-2.27□□□□□ -2.77
SMC4Q9NTJ3 RNU6-361P-201ENST00000364454 107 ntBASIC-2.28□□□□□ -2.77
SMC4Q9NTJ3 SNORD60-201ENST00000383903 83 ntBASIC-2.28□□□□□ -2.77
SMC4Q9NTJ3 SNORA17.4-201ENST00000391287 132 ntBASIC-2.28□□□□□ -2.77
SMC4Q9NTJ3 SNORA72.7-201ENST00000516349 94 ntBASIC-2.28□□□□□ -2.77
SMC4Q9NTJ3 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.29□□□□□ -2.78
SMC4Q9NTJ3 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.29□□□□□ -2.78
SMC4Q9NTJ3 RNU6-446P-201ENST00000362827 106 ntBASIC-2.3□□□□□ -2.78
SMC4Q9NTJ3 MIR548N-201ENST00000408742 75 ntBASIC-2.3□□□□□ -2.78
SMC4Q9NTJ3 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.3□□□□□ -2.78
SMC4Q9NTJ3 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.3□□□□□ -2.78
SMC4Q9NTJ3 RNA5SP405-201ENST00000363059 114 ntBASIC-2.31□□□□□ -2.78
SMC4Q9NTJ3 SNORD45.2-201ENST00000363552 72 ntBASIC-2.32□□□□□ -2.78
SMC4Q9NTJ3 RNU6-194P-201ENST00000363862 105 ntBASIC-2.32□□□□□ -2.78
SMC4Q9NTJ3 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.32□□□□□ -2.78
SMC4Q9NTJ3 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.32□□□□□ -2.78
SMC4Q9NTJ3 RNA5SP93-201ENST00000362525 114 ntBASIC-2.33□□□□□ -2.78
SMC4Q9NTJ3 SNORD18C-201ENST00000362704 69 ntBASIC-2.33□□□□□ -2.78
SMC4Q9NTJ3 SNORD54-201ENST00000459159 67 ntBASIC-2.33□□□□□ -2.78
SMC4Q9NTJ3 MIR3139-201ENST00000579145 76 ntBASIC-2.35□□□□□ -2.79
SMC4Q9NTJ3 MIR4426-201ENST00000640330 63 ntBASIC-2.36□□□□□ -2.79
SMC4Q9NTJ3 RNU6-638P-201ENST00000516582 104 ntBASIC-2.37□□□□□ -2.79
SMC4Q9NTJ3 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.38□□□□□ -2.79
SMC4Q9NTJ3 RNU6-742P-201ENST00000365289 107 ntBASIC-2.41□□□□□ -2.8
SMC4Q9NTJ3 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.41□□□□□ -2.8
SMC4Q9NTJ3 MIR548X-201ENST00000580069 75 ntBASIC-2.42□□□□□ -2.8
SMC4Q9NTJ3 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.44□□□□□ -2.8
SMC4Q9NTJ3 SNORD113-4-201ENST00000364802 75 ntBASIC-2.44□□□□□ -2.8
SMC4Q9NTJ3 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.45□□□□□ -2.8
SMC4Q9NTJ3 MT-TM-201ENST00000387377 68 ntBASIC-2.45□□□□□ -2.8
SMC4Q9NTJ3 MIR633-201ENST00000384821 98 ntBASIC-2.46□□□□□ -2.8
SMC4Q9NTJ3 RNU6-300P-201ENST00000459080 104 ntBASIC-2.46□□□□□ -2.8
SMC4Q9NTJ3 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.47□□□□□ -2.8
SMC4Q9NTJ3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.48□□□□□ -2.81
SMC4Q9NTJ3 RNU6-590P-201ENST00000365039 107 ntBASIC-2.49□□□□□ -2.81
SMC4Q9NTJ3 RNU6-68P-201ENST00000516576 104 ntBASIC-2.49□□□□□ -2.81
SMC4Q9NTJ3 RNU6-829P-201ENST00000363700 112 ntBASIC-2.5□□□□□ -2.81
SMC4Q9NTJ3 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.51□□□□□ -2.81
SMC4Q9NTJ3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.51□□□□□ -2.81
SMC4Q9NTJ3 RNY4-201ENST00000516507 96 ntBASIC-2.51□□□□□ -2.81
SMC4Q9NTJ3 MIR4748-201ENST00000578076 82 ntBASIC-2.52□□□□□ -2.81
SMC4Q9NTJ3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.52□□□□□ -2.81
SMC4Q9NTJ3 AC097484.2-201ENST00000509147 251 ntBASIC-2.53□□□□□ -2.81
SMC4Q9NTJ3 RNU6-176P-201ENST00000517196 105 ntBASIC-2.53□□□□□ -2.81
SMC4Q9NTJ3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.53□□□□□ -2.81
SMC4Q9NTJ3 FTX_4.1-201ENST00000616291 147 ntBASIC-2.54□□□□□ -2.82
SMC4Q9NTJ3 SNORD113-3-201ENST00000364830 72 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.55□□□□□ -2.82
SMC4Q9NTJ3 AC125388.1-201ENST00000459631 156 ntBASIC-2.56□□□□□ -2.82
SMC4Q9NTJ3 MIR379-201ENST00000362218 67 ntBASIC-2.57□□□□□ -2.82
SMC4Q9NTJ3 RNU6-912P-201ENST00000363800 104 ntBASIC-2.57□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms