Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RNU6-520P-201ENST00000384717 104 ntBASIC-2.01□□□□□ -2.73
BRF2Q9HAW0 AC114801.3-201ENST00000510231 177 ntBASIC-2.01□□□□□ -2.73
BRF2Q9HAW0 RNY4P27-201ENST00000363341 96 ntBASIC-2.02□□□□□ -2.73
BRF2Q9HAW0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.02□□□□□ -2.73
BRF2Q9HAW0 SNORA40.16-201ENST00000517238 121 ntBASIC-2.02□□□□□ -2.73
BRF2Q9HAW0 RNU6-695P-201ENST00000391157 104 ntBASIC-2.03□□□□□ -2.73
BRF2Q9HAW0 SNORD45.2-201ENST00000363552 72 ntBASIC-2.04□□□□□ -2.74
BRF2Q9HAW0 RNY3P8-201ENST00000411366 126 ntBASIC-2.04□□□□□ -2.74
BRF2Q9HAW0 AC110620.1-201ENST00000416042 228 ntBASIC-2.04□□□□□ -2.74
BRF2Q9HAW0 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.05□□□□□ -2.74
BRF2Q9HAW0 MIR4723-201ENST00000585070 81 ntBASIC-2.05□□□□□ -2.74
BRF2Q9HAW0 MIR1207-201ENST00000408249 87 ntBASIC-2.07□□□□□ -2.74
BRF2Q9HAW0 MIR664B-201ENST00000626756 61 ntBASIC-2.07□□□□□ -2.74
BRF2Q9HAW0 U6.97-201ENST00000636904 101 ntBASIC-2.07□□□□□ -2.74
BRF2Q9HAW0 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.08□□□□□ -2.74
BRF2Q9HAW0 RNU6-471P-201ENST00000383944 106 ntBASIC-2.08□□□□□ -2.74
BRF2Q9HAW0 AC013734.1-201ENST00000619329 111 ntBASIC-2.09□□□□□ -2.74
BRF2Q9HAW0 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.1□□□□□ -2.75
BRF2Q9HAW0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.1□□□□□ -2.75
BRF2Q9HAW0 RNU6-841P-201ENST00000383872 107 ntBASIC-2.11□□□□□ -2.75
BRF2Q9HAW0 SNORD60-201ENST00000383903 83 ntBASIC-2.11□□□□□ -2.75
BRF2Q9HAW0 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.11□□□□□ -2.75
BRF2Q9HAW0 MIR3123-201ENST00000583417 75 ntBASIC-2.11□□□□□ -2.75
BRF2Q9HAW0 RNU6-118P-201ENST00000516552 102 ntBASIC-2.13□□□□□ -2.75
BRF2Q9HAW0 RNU6-980P-201ENST00000516925 103 ntBASIC-2.13□□□□□ -2.75
BRF2Q9HAW0 MIR202-201ENST00000362219 110 ntBASIC-2.15□□□□□ -2.75
BRF2Q9HAW0 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.15□□□□□ -2.75
BRF2Q9HAW0 RNU6-530P-201ENST00000391180 107 ntBASIC-2.15□□□□□ -2.75
BRF2Q9HAW0 AL451105.1-201ENST00000450005 189 ntBASIC-2.15□□□□□ -2.75
BRF2Q9HAW0 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.17□□□□□ -2.76
BRF2Q9HAW0 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.17□□□□□ -2.76
BRF2Q9HAW0 RNU6-638P-201ENST00000516582 104 ntBASIC-2.18□□□□□ -2.76
BRF2Q9HAW0 MIR548AM-201ENST00000584298 74 ntBASIC-2.18□□□□□ -2.76
BRF2Q9HAW0 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.19□□□□□ -2.76
BRF2Q9HAW0 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.19□□□□□ -2.76
BRF2Q9HAW0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.19□□□□□ -2.76
BRF2Q9HAW0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.19□□□□□ -2.76
BRF2Q9HAW0 RNU4-88P-201ENST00000411220 86 ntBASIC-2.2□□□□□ -2.76
BRF2Q9HAW0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.2□□□□□ -2.76
BRF2Q9HAW0 SNORD18C-201ENST00000362704 69 ntBASIC-2.21□□□□□ -2.76
BRF2Q9HAW0 RNU6-119P-201ENST00000364882 107 ntBASIC-2.21□□□□□ -2.76
BRF2Q9HAW0 SNORA17.4-201ENST00000391287 132 ntBASIC-2.21□□□□□ -2.76
BRF2Q9HAW0 MIR3139-201ENST00000579145 76 ntBASIC-2.21□□□□□ -2.76
BRF2Q9HAW0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.22□□□□□ -2.76
BRF2Q9HAW0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.23□□□□□ -2.77
BRF2Q9HAW0 RNU6-361P-201ENST00000364454 107 ntBASIC-2.24□□□□□ -2.77
BRF2Q9HAW0 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.24□□□□□ -2.77
BRF2Q9HAW0 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.24□□□□□ -2.77
BRF2Q9HAW0 RNU6-419P-201ENST00000517030 63 ntBASIC-2.24□□□□□ -2.77
BRF2Q9HAW0 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.25□□□□□ -2.77
BRF2Q9HAW0 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.26□□□□□ -2.77
BRF2Q9HAW0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.27□□□□□ -2.77
BRF2Q9HAW0 MIR4426-201ENST00000640330 63 ntBASIC-2.27□□□□□ -2.77
BRF2Q9HAW0 MT-TM-201ENST00000387377 68 ntBASIC-2.29□□□□□ -2.78
BRF2Q9HAW0 MIR548N-201ENST00000408742 75 ntBASIC-2.29□□□□□ -2.78
BRF2Q9HAW0 AC125388.1-201ENST00000459631 156 ntBASIC-2.29□□□□□ -2.78
BRF2Q9HAW0 RNU6-590P-201ENST00000365039 107 ntBASIC-2.32□□□□□ -2.78
BRF2Q9HAW0 MIR496-201ENST00000385226 102 ntBASIC-2.32□□□□□ -2.78
BRF2Q9HAW0 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.35□□□□□ -2.79
BRF2Q9HAW0 RNU6-300P-201ENST00000459080 104 ntBASIC-2.35□□□□□ -2.79
BRF2Q9HAW0 RNU6-176P-201ENST00000517196 105 ntBASIC-2.35□□□□□ -2.79
BRF2Q9HAW0 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.36□□□□□ -2.79
BRF2Q9HAW0 MIR548X-201ENST00000580069 75 ntBASIC-2.36□□□□□ -2.79
BRF2Q9HAW0 MIR581-201ENST00000384895 96 ntBASIC-2.38□□□□□ -2.79
BRF2Q9HAW0 MIR548W-201ENST00000581970 74 ntBASIC-2.39□□□□□ -2.79
BRF2Q9HAW0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.39□□□□□ -2.79
BRF2Q9HAW0 snoU13.10-201ENST00000459301 103 ntBASIC-2.4□□□□□ -2.79
BRF2Q9HAW0 RNU6-446P-201ENST00000362827 106 ntBASIC-2.42□□□□□ -2.8
BRF2Q9HAW0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.42□□□□□ -2.8
BRF2Q9HAW0 MIR4748-201ENST00000578076 82 ntBASIC-2.43□□□□□ -2.8
BRF2Q9HAW0 MIR633-201ENST00000384821 98 ntBASIC-2.44□□□□□ -2.8
BRF2Q9HAW0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.44□□□□□ -2.8
BRF2Q9HAW0 MIR379-201ENST00000362218 67 ntBASIC-2.45□□□□□ -2.8
BRF2Q9HAW0 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.46□□□□□ -2.8
BRF2Q9HAW0 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.46□□□□□ -2.8
BRF2Q9HAW0 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.48□□□□□ -2.81
BRF2Q9HAW0 SNORD54-201ENST00000459159 67 ntBASIC-2.48□□□□□ -2.81
BRF2Q9HAW0 RNU6-742P-201ENST00000365289 107 ntBASIC-2.49□□□□□ -2.81
BRF2Q9HAW0 RNU6-829P-201ENST00000363700 112 ntBASIC-2.51□□□□□ -2.81
BRF2Q9HAW0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.51□□□□□ -2.81
BRF2Q9HAW0 FTX_4.1-201ENST00000616291 147 ntBASIC-2.52□□□□□ -2.81
BRF2Q9HAW0 AC097484.2-201ENST00000509147 251 ntBASIC-2.53□□□□□ -2.81
BRF2Q9HAW0 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.53□□□□□ -2.81
BRF2Q9HAW0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.54□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.55□□□□□ -2.82
BRF2Q9HAW0 RNA5SP93-201ENST00000362525 114 ntBASIC-2.57□□□□□ -2.82
BRF2Q9HAW0 SNORD113-4-201ENST00000364802 75 ntBASIC-2.57□□□□□ -2.82
BRF2Q9HAW0 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.58□□□□□ -2.82
BRF2Q9HAW0 RNU4-33P-201ENST00000364316 85 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.59□□□□□ -2.82
BRF2Q9HAW0 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.6□□□□□ -2.83
BRF2Q9HAW0 AC139453.2-201ENST00000487255 133 ntBASIC-2.6□□□□□ -2.83
BRF2Q9HAW0 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.61□□□□□ -2.83
BRF2Q9HAW0 RNU6-230P-201ENST00000362457 104 ntBASIC-2.61□□□□□ -2.83
BRF2Q9HAW0 RNY4P7-201ENST00000364600 96 ntBASIC-2.62□□□□□ -2.83
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms