Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU6-471P-201ENST00000383944 106 ntBASIC-1.51□□□□□ -2.65
ZNF541Q9H0D2 AC013734.1-201ENST00000619329 111 ntBASIC-1.51□□□□□ -2.65
ZNF541Q9H0D2 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.52□□□□□ -2.65
ZNF541Q9H0D2 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.52□□□□□ -2.65
ZNF541Q9H0D2 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.54□□□□□ -2.66
ZNF541Q9H0D2 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.54□□□□□ -2.66
ZNF541Q9H0D2 RNU6-520P-201ENST00000384717 104 ntBASIC-1.55□□□□□ -2.66
ZNF541Q9H0D2 MIR496-201ENST00000385226 102 ntBASIC-1.55□□□□□ -2.66
ZNF541Q9H0D2 RNA5SP86-201ENST00000390869 98 ntBASIC-1.55□□□□□ -2.66
ZNF541Q9H0D2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
ZNF541Q9H0D2 RNU6-119P-201ENST00000364882 107 ntBASIC-1.57□□□□□ -2.66
ZNF541Q9H0D2 RNU6-118P-201ENST00000516552 102 ntBASIC-1.57□□□□□ -2.66
ZNF541Q9H0D2 MIR548H1-201ENST00000408610 102 ntBASIC-1.59□□□□□ -2.66
ZNF541Q9H0D2 RNU6-638P-201ENST00000516582 104 ntBASIC-1.59□□□□□ -2.66
ZNF541Q9H0D2 RNU6-695P-201ENST00000391157 104 ntBASIC-1.6□□□□□ -2.67
ZNF541Q9H0D2 U6.97-201ENST00000636904 101 ntBASIC-1.61□□□□□ -2.67
ZNF541Q9H0D2 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.62□□□□□ -2.67
ZNF541Q9H0D2 MIR487B-201ENST00000385021 84 ntBASIC-1.63□□□□□ -2.67
ZNF541Q9H0D2 AL451105.1-201ENST00000450005 189 ntBASIC-1.63□□□□□ -2.67
ZNF541Q9H0D2 MIR202-201ENST00000362219 110 ntBASIC-1.64□□□□□ -2.67
ZNF541Q9H0D2 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.65□□□□□ -2.67
ZNF541Q9H0D2 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.65□□□□□ -2.67
ZNF541Q9H0D2 RNU6-530P-201ENST00000391180 107 ntBASIC-1.65□□□□□ -2.67
ZNF541Q9H0D2 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.65□□□□□ -2.67
ZNF541Q9H0D2 RNU6-419P-201ENST00000517030 63 ntBASIC-1.65□□□□□ -2.67
ZNF541Q9H0D2 RNU6-446P-201ENST00000362827 106 ntBASIC-1.67□□□□□ -2.68
ZNF541Q9H0D2 SNORD45.2-201ENST00000363552 72 ntBASIC-1.67□□□□□ -2.68
ZNF541Q9H0D2 RNU6-361P-201ENST00000364454 107 ntBASIC-1.67□□□□□ -2.68
ZNF541Q9H0D2 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.67□□□□□ -2.68
ZNF541Q9H0D2 SNORD60-201ENST00000383903 83 ntBASIC-1.68□□□□□ -2.68
ZNF541Q9H0D2 MIR581-201ENST00000384895 96 ntBASIC-1.68□□□□□ -2.68
ZNF541Q9H0D2 MIR4756-201ENST00000577874 78 ntBASIC-1.68□□□□□ -2.68
ZNF541Q9H0D2 MIR3123-201ENST00000583417 75 ntBASIC-1.68□□□□□ -2.68
ZNF541Q9H0D2 RNY4P7-201ENST00000364600 96 ntBASIC-1.69□□□□□ -2.68
ZNF541Q9H0D2 AC108019.1-201ENST00000512540 175 ntBASIC-1.69□□□□□ -2.68
ZNF541Q9H0D2 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.7□□□□□ -2.68
ZNF541Q9H0D2 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.7□□□□□ -2.68
ZNF541Q9H0D2 SNORA17.4-201ENST00000391287 132 ntBASIC-1.7□□□□□ -2.68
ZNF541Q9H0D2 MIR548N-201ENST00000408742 75 ntBASIC-1.7□□□□□ -2.68
ZNF541Q9H0D2 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.71□□□□□ -2.68
ZNF541Q9H0D2 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.71□□□□□ -2.68
ZNF541Q9H0D2 RNA5SP93-201ENST00000362525 114 ntBASIC-1.72□□□□□ -2.69
ZNF541Q9H0D2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.72□□□□□ -2.69
ZNF541Q9H0D2 MIR3139-201ENST00000579145 76 ntBASIC-1.72□□□□□ -2.69
ZNF541Q9H0D2 SNORD18C-201ENST00000362704 69 ntBASIC-1.73□□□□□ -2.69
ZNF541Q9H0D2 RNU6-590P-201ENST00000365039 107 ntBASIC-1.74□□□□□ -2.69
ZNF541Q9H0D2 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.74□□□□□ -2.69
ZNF541Q9H0D2 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.74□□□□□ -2.69
ZNF541Q9H0D2 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.75□□□□□ -2.69
ZNF541Q9H0D2 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.75□□□□□ -2.69
ZNF541Q9H0D2 SNORD54-201ENST00000459159 67 ntBASIC-1.75□□□□□ -2.69
ZNF541Q9H0D2 MIR548X-201ENST00000580069 75 ntBASIC-1.75□□□□□ -2.69
ZNF541Q9H0D2 MIR664B-201ENST00000626756 61 ntBASIC-1.75□□□□□ -2.69
ZNF541Q9H0D2 RNU6-841P-201ENST00000383872 107 ntBASIC-1.76□□□□□ -2.69
ZNF541Q9H0D2 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.76□□□□□ -2.69
ZNF541Q9H0D2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
ZNF541Q9H0D2 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.76□□□□□ -2.69
ZNF541Q9H0D2 MIR4426-201ENST00000640330 63 ntBASIC-1.76□□□□□ -2.69
ZNF541Q9H0D2 MT-TM-201ENST00000387377 68 ntBASIC-1.77□□□□□ -2.69
ZNF541Q9H0D2 SNORD113-4-201ENST00000364802 75 ntBASIC-1.78□□□□□ -2.69
ZNF541Q9H0D2 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.78□□□□□ -2.69
ZNF541Q9H0D2 MIR633-201ENST00000384821 98 ntBASIC-1.78□□□□□ -2.69
ZNF541Q9H0D2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.78□□□□□ -2.69
ZNF541Q9H0D2 RNU6-829P-201ENST00000363700 112 ntBASIC-1.8□□□□□ -2.7
ZNF541Q9H0D2 AC125388.1-201ENST00000459631 156 ntBASIC-1.8□□□□□ -2.7
ZNF541Q9H0D2 MIR548AM-201ENST00000584298 74 ntBASIC-1.8□□□□□ -2.7
ZNF541Q9H0D2 RNU6-742P-201ENST00000365289 107 ntBASIC-1.81□□□□□ -2.7
ZNF541Q9H0D2 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.83□□□□□ -2.7
ZNF541Q9H0D2 RNU6-300P-201ENST00000459080 104 ntBASIC-1.84□□□□□ -2.7
ZNF541Q9H0D2 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.85□□□□□ -2.71
ZNF541Q9H0D2 RNA5SP405-201ENST00000363059 114 ntBASIC-1.86□□□□□ -2.71
ZNF541Q9H0D2 snoU13.10-201ENST00000459301 103 ntBASIC-1.86□□□□□ -2.71
ZNF541Q9H0D2 MIR548W-201ENST00000581970 74 ntBASIC-1.86□□□□□ -2.71
ZNF541Q9H0D2 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.87□□□□□ -2.71
ZNF541Q9H0D2 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.87□□□□□ -2.71
ZNF541Q9H0D2 RNU6-68P-201ENST00000516576 104 ntBASIC-1.87□□□□□ -2.71
ZNF541Q9H0D2 RNU6-194P-201ENST00000363862 105 ntBASIC-1.89□□□□□ -2.71
ZNF541Q9H0D2 AC139453.2-201ENST00000487255 133 ntBASIC-1.89□□□□□ -2.71
ZNF541Q9H0D2 RNU6-176P-201ENST00000517196 105 ntBASIC-1.89□□□□□ -2.71
ZNF541Q9H0D2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.89□□□□□ -2.71
ZNF541Q9H0D2 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.9□□□□□ -2.71
ZNF541Q9H0D2 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.9□□□□□ -2.71
ZNF541Q9H0D2 AC079150.2-201ENST00000443733 78 ntBASIC-1.91□□□□□ -2.72
ZNF541Q9H0D2 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.92□□□□□ -2.72
ZNF541Q9H0D2 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.92□□□□□ -2.72
ZNF541Q9H0D2 MIR379-201ENST00000362218 67 ntBASIC-1.93□□□□□ -2.72
ZNF541Q9H0D2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
ZNF541Q9H0D2 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.94□□□□□ -2.72
ZNF541Q9H0D2 RNU4-33P-201ENST00000364316 85 ntBASIC-1.94□□□□□ -2.72
ZNF541Q9H0D2 RNU4-88P-201ENST00000411220 86 ntBASIC-1.94□□□□□ -2.72
ZNF541Q9H0D2 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.95□□□□□ -2.72
ZNF541Q9H0D2 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.95□□□□□ -2.72
ZNF541Q9H0D2 RNU6-912P-201ENST00000363800 104 ntBASIC-1.97□□□□□ -2.73
ZNF541Q9H0D2 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.97□□□□□ -2.73
ZNF541Q9H0D2 RNY4-201ENST00000516507 96 ntBASIC-1.97□□□□□ -2.73
ZNF541Q9H0D2 RNU6-499P-201ENST00000365615 107 ntBASIC-1.98□□□□□ -2.73
ZNF541Q9H0D2 Y_RNA.320-201ENST00000365144 102 ntBASIC-2□□□□□ -2.73
ZNF541Q9H0D2 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.01□□□□□ -2.73
ZNF541Q9H0D2 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.03□□□□□ -2.73
ZNF541Q9H0D2 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms