Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 RNU6-871P-201ENST00000516122 100 ntBASIC-2.5□□□□□ -2.81
NDUFAF3Q9BU61 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.5□□□□□ -2.81
NDUFAF3Q9BU61 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.51□□□□□ -2.81
NDUFAF3Q9BU61 MIR548AM-201ENST00000584298 74 ntBASIC-2.51□□□□□ -2.81
NDUFAF3Q9BU61 SNORA40B-201ENST00000385573 128 ntBASIC-2.52□□□□□ -2.81
NDUFAF3Q9BU61 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.52□□□□□ -2.81
NDUFAF3Q9BU61 RNU6-194P-201ENST00000363862 105 ntBASIC-2.53□□□□□ -2.81
NDUFAF3Q9BU61 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.53□□□□□ -2.81
NDUFAF3Q9BU61 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.54□□□□□ -2.82
NDUFAF3Q9BU61 SNORD60-201ENST00000383903 83 ntBASIC-2.54□□□□□ -2.82
NDUFAF3Q9BU61 RNU7-119P-201ENST00000459279 63 ntBASIC-2.54□□□□□ -2.82
NDUFAF3Q9BU61 SNORD73B-201ENST00000364394 72 ntBASIC-2.55□□□□□ -2.82
NDUFAF3Q9BU61 SNORD18C-201ENST00000362704 69 ntBASIC-2.56□□□□□ -2.82
NDUFAF3Q9BU61 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.56□□□□□ -2.82
NDUFAF3Q9BU61 RNU6-649P-201ENST00000384463 107 ntBASIC-2.56□□□□□ -2.82
NDUFAF3Q9BU61 RNA5SP170-201ENST00000517150 101 ntBASIC-2.56□□□□□ -2.82
NDUFAF3Q9BU61 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.56□□□□□ -2.82
NDUFAF3Q9BU61 MIR202-201ENST00000362219 110 ntBASIC-2.57□□□□□ -2.82
NDUFAF3Q9BU61 RNU6-573P-201ENST00000383938 106 ntBASIC-2.58□□□□□ -2.82
NDUFAF3Q9BU61 MIR1255A-201ENST00000408338 113 ntBASIC-2.59□□□□□ -2.82
NDUFAF3Q9BU61 RNU6-857P-201ENST00000515893 110 ntBASIC-2.59□□□□□ -2.82
NDUFAF3Q9BU61 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.6□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-940P-201ENST00000363433 104 ntBASIC-2.61□□□□□ -2.83
NDUFAF3Q9BU61 SNORA40.16-201ENST00000517238 121 ntBASIC-2.61□□□□□ -2.83
NDUFAF3Q9BU61 MIR4511-201ENST00000582784 87 ntBASIC-2.61□□□□□ -2.83
NDUFAF3Q9BU61 U6.111-201ENST00000636093 83 ntBASIC-2.61□□□□□ -2.83
NDUFAF3Q9BU61 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.61□□□□□ -2.83
NDUFAF3Q9BU61 SNORD45.2-201ENST00000363552 72 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 SNORA26.2-201ENST00000390922 122 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-279P-201ENST00000391297 101 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 RNU4-88P-201ENST00000411220 86 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-539P-201ENST00000516665 103 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 AC103706.3-201ENST00000636297 85 ntBASIC-2.62□□□□□ -2.83
NDUFAF3Q9BU61 SNORA17.4-201ENST00000391287 132 ntBASIC-2.63□□□□□ -2.83
NDUFAF3Q9BU61 RNY4P29-201ENST00000410801 97 ntBASIC-2.63□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.65□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-361P-201ENST00000364454 107 ntBASIC-2.65□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.65□□□□□ -2.83
NDUFAF3Q9BU61 RNU6-530P-201ENST00000391180 107 ntBASIC-2.65□□□□□ -2.83
NDUFAF3Q9BU61 MIR548N-201ENST00000408742 75 ntBASIC-2.65□□□□□ -2.83
NDUFAF3Q9BU61 MIR4679-1-201ENST00000637619 75 ntBASIC-2.66□□□□□ -2.84
NDUFAF3Q9BU61 MIR581-201ENST00000384895 96 ntBASIC-2.68□□□□□ -2.84
NDUFAF3Q9BU61 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.69□□□□□ -2.84
NDUFAF3Q9BU61 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.69□□□□□ -2.84
NDUFAF3Q9BU61 snoU13.10-201ENST00000459301 103 ntBASIC-2.69□□□□□ -2.84
NDUFAF3Q9BU61 AL451105.1-201ENST00000450005 189 ntBASIC-2.7□□□□□ -2.84
NDUFAF3Q9BU61 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.7□□□□□ -2.84
NDUFAF3Q9BU61 MIR3938-201ENST00000582157 103 ntBASIC-2.71□□□□□ -2.84
NDUFAF3Q9BU61 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.71□□□□□ -2.84
NDUFAF3Q9BU61 MIR466-201ENST00000580653 84 ntBASIC-2.72□□□□□ -2.84
NDUFAF3Q9BU61 MIR548W-201ENST00000581970 74 ntBASIC-2.72□□□□□ -2.84
NDUFAF3Q9BU61 SNORD78.1-201ENST00000390866 65 ntBASIC-2.74□□□□□ -2.85
NDUFAF3Q9BU61 RNU6-800P-201ENST00000384473 103 ntBASIC-2.75□□□□□ -2.85
NDUFAF3Q9BU61 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.76□□□□□ -2.85
NDUFAF3Q9BU61 MIR4426-201ENST00000640330 63 ntBASIC-2.76□□□□□ -2.85
NDUFAF3Q9BU61 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.78□□□□□ -2.85
NDUFAF3Q9BU61 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.78□□□□□ -2.85
NDUFAF3Q9BU61 RNU6-230P-201ENST00000362457 104 ntBASIC-2.79□□□□□ -2.86
NDUFAF3Q9BU61 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.79□□□□□ -2.86
NDUFAF3Q9BU61 RNA5SP225-201ENST00000410874 135 ntBASIC-2.79□□□□□ -2.86
NDUFAF3Q9BU61 RNU6-300P-201ENST00000459080 104 ntBASIC-2.82□□□□□ -2.86
NDUFAF3Q9BU61 RNU6-419P-201ENST00000517030 63 ntBASIC-2.82□□□□□ -2.86
NDUFAF3Q9BU61 MIR4662A-201ENST00000637499 67 ntBASIC-2.82□□□□□ -2.86
NDUFAF3Q9BU61 RNU6-176P-201ENST00000517196 105 ntBASIC-2.83□□□□□ -2.86
NDUFAF3Q9BU61 MIR379-201ENST00000362218 67 ntBASIC-2.84□□□□□ -2.86
NDUFAF3Q9BU61 AC110620.1-201ENST00000416042 228 ntBASIC-2.84□□□□□ -2.86
NDUFAF3Q9BU61 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.84□□□□□ -2.86
NDUFAF3Q9BU61 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.86□□□□□ -2.87
NDUFAF3Q9BU61 RNU6-590P-201ENST00000365039 107 ntBASIC-2.86□□□□□ -2.87
NDUFAF3Q9BU61 AC097484.2-201ENST00000509147 251 ntBASIC-2.86□□□□□ -2.87
NDUFAF3Q9BU61 RNU6-776P-201ENST00000364403 104 ntBASIC-2.87□□□□□ -2.87
NDUFAF3Q9BU61 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.87□□□□□ -2.87
NDUFAF3Q9BU61 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.87□□□□□ -2.87
NDUFAF3Q9BU61 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.88□□□□□ -2.87
NDUFAF3Q9BU61 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.88□□□□□ -2.87
NDUFAF3Q9BU61 MIR1302-4-201ENST00000408701 150 ntBASIC-2.88□□□□□ -2.87
NDUFAF3Q9BU61 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.89□□□□□ -2.87
NDUFAF3Q9BU61 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.9□□□□□ -2.87
NDUFAF3Q9BU61 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.9□□□□□ -2.87
NDUFAF3Q9BU61 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.93□□□□□ -2.88
NDUFAF3Q9BU61 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.93□□□□□ -2.88
NDUFAF3Q9BU61 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.93□□□□□ -2.88
NDUFAF3Q9BU61 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.93□□□□□ -2.88
NDUFAF3Q9BU61 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.93□□□□□ -2.88
NDUFAF3Q9BU61 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.93□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.94□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-803P-201ENST00000516034 102 ntBASIC-2.94□□□□□ -2.88
NDUFAF3Q9BU61 MIR4748-201ENST00000578076 82 ntBASIC-2.94□□□□□ -2.88
NDUFAF3Q9BU61 FTX_4.1-201ENST00000616291 147 ntBASIC-2.94□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-912P-201ENST00000363800 104 ntBASIC-2.95□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.96□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-742P-201ENST00000365289 107 ntBASIC-2.96□□□□□ -2.88
NDUFAF3Q9BU61 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.96□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-68P-201ENST00000516576 104 ntBASIC-2.97□□□□□ -2.88
NDUFAF3Q9BU61 RNU6-471P-201ENST00000383944 106 ntBASIC-2.98□□□□□ -2.89
NDUFAF3Q9BU61 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.98□□□□□ -2.89
NDUFAF3Q9BU61 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.99□□□□□ -2.89
NDUFAF3Q9BU61 MIR548X-201ENST00000580069 75 ntBASIC-3□□□□□ -2.89
NDUFAF3Q9BU61 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.03□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms