Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 RNU6-800P-201ENST00000384473 103 ntBASIC-1.2□□□□□ -2.6
GFI1Q99684 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.2□□□□□ -2.6
GFI1Q99684 RNA5SP180-201ENST00000516181 101 ntBASIC-1.2□□□□□ -2.6
GFI1Q99684 MIR664B-201ENST00000626756 61 ntBASIC-1.2□□□□□ -2.6
GFI1Q99684 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.21□□□□□ -2.6
GFI1Q99684 SNORD60-201ENST00000383903 83 ntBASIC-1.21□□□□□ -2.6
GFI1Q99684 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.21□□□□□ -2.6
GFI1Q99684 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.21□□□□□ -2.6
GFI1Q99684 AC110620.1-201ENST00000416042 228 ntBASIC-1.21□□□□□ -2.6
GFI1Q99684 AL451105.1-201ENST00000450005 189 ntBASIC-1.21□□□□□ -2.6
GFI1Q99684 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.21□□□□□ -2.6
GFI1Q99684 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.22□□□□□ -2.6
GFI1Q99684 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.22□□□□□ -2.6
GFI1Q99684 MIR4679-1-201ENST00000637619 75 ntBASIC-1.22□□□□□ -2.6
GFI1Q99684 MIR4426-201ENST00000640330 63 ntBASIC-1.22□□□□□ -2.6
GFI1Q99684 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.23□□□□□ -2.61
GFI1Q99684 SNORD113-3-201ENST00000364830 72 ntBASIC-1.23□□□□□ -2.61
GFI1Q99684 HAR1A.1-201ENST00000459583 118 ntBASIC-1.23□□□□□ -2.61
GFI1Q99684 RNU6-539P-201ENST00000516665 103 ntBASIC-1.23□□□□□ -2.61
GFI1Q99684 RNU6-419P-201ENST00000517030 63 ntBASIC-1.23□□□□□ -2.61
GFI1Q99684 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.24□□□□□ -2.61
GFI1Q99684 RNU6-940P-201ENST00000363433 104 ntBASIC-1.24□□□□□ -2.61
GFI1Q99684 SNORD113-4-201ENST00000364802 75 ntBASIC-1.24□□□□□ -2.61
GFI1Q99684 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.24□□□□□ -2.61
GFI1Q99684 AC103706.3-201ENST00000636297 85 ntBASIC-1.24□□□□□ -2.61
GFI1Q99684 RNU6-776P-201ENST00000364403 104 ntBASIC-1.25□□□□□ -2.61
GFI1Q99684 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.25□□□□□ -2.61
GFI1Q99684 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.25□□□□□ -2.61
GFI1Q99684 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.25□□□□□ -2.61
GFI1Q99684 RNU7-119P-201ENST00000459279 63 ntBASIC-1.25□□□□□ -2.61
GFI1Q99684 RNU6-871P-201ENST00000516122 100 ntBASIC-1.25□□□□□ -2.61
GFI1Q99684 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.27□□□□□ -2.61
GFI1Q99684 RNA5SP405-201ENST00000363059 114 ntBASIC-1.27□□□□□ -2.61
GFI1Q99684 RNU6-590P-201ENST00000365039 107 ntBASIC-1.27□□□□□ -2.61
GFI1Q99684 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.27□□□□□ -2.61
GFI1Q99684 AC097484.2-201ENST00000509147 251 ntBASIC-1.27□□□□□ -2.61
GFI1Q99684 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
GFI1Q99684 RNU6-300P-201ENST00000459080 104 ntBASIC-1.28□□□□□ -2.61
GFI1Q99684 RNU6-118P-201ENST00000516552 102 ntBASIC-1.28□□□□□ -2.61
GFI1Q99684 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.28□□□□□ -2.61
GFI1Q99684 MIR1285-2-201ENST00000408311 88 ntBASIC-1.29□□□□□ -2.62
GFI1Q99684 RNA5SP266-201ENST00000410273 108 ntBASIC-1.29□□□□□ -2.62
GFI1Q99684 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
GFI1Q99684 MIR1254-1-201ENST00000408257 97 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 MIR548X-201ENST00000580069 75 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.3□□□□□ -2.62
GFI1Q99684 RNU6-141P-201ENST00000410499 105 ntBASIC-1.31□□□□□ -2.62
GFI1Q99684 MIR4748-201ENST00000578076 82 ntBASIC-1.31□□□□□ -2.62
GFI1Q99684 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.32□□□□□ -2.62
GFI1Q99684 RNU6-194P-201ENST00000363862 105 ntBASIC-1.32□□□□□ -2.62
GFI1Q99684 MIR3139-201ENST00000579145 76 ntBASIC-1.32□□□□□ -2.62
GFI1Q99684 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.33□□□□□ -2.62
GFI1Q99684 FTX_4.1-201ENST00000616291 147 ntBASIC-1.33□□□□□ -2.62
GFI1Q99684 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.34□□□□□ -2.62
GFI1Q99684 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.34□□□□□ -2.62
GFI1Q99684 RNU6-471P-201ENST00000383944 106 ntBASIC-1.34□□□□□ -2.62
GFI1Q99684 MIR633-201ENST00000384821 98 ntBASIC-1.34□□□□□ -2.62
GFI1Q99684 MIR4662A-201ENST00000637499 67 ntBASIC-1.34□□□□□ -2.62
GFI1Q99684 SNORD45.2-201ENST00000363552 72 ntBASIC-1.35□□□□□ -2.63
GFI1Q99684 RNU6-829P-201ENST00000363700 112 ntBASIC-1.35□□□□□ -2.63
GFI1Q99684 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.35□□□□□ -2.63
GFI1Q99684 AC114801.3-201ENST00000510231 177 ntBASIC-1.35□□□□□ -2.63
GFI1Q99684 MIR379-201ENST00000362218 67 ntBASIC-1.36□□□□□ -2.63
GFI1Q99684 MIR548H4-201ENST00000408689 111 ntBASIC-1.36□□□□□ -2.63
GFI1Q99684 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.37□□□□□ -2.63
GFI1Q99684 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.37□□□□□ -2.63
GFI1Q99684 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.37□□□□□ -2.63
GFI1Q99684 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.38□□□□□ -2.63
GFI1Q99684 MIR198-201ENST00000637333 62 ntBASIC-1.39□□□□□ -2.63
GFI1Q99684 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.4□□□□□ -2.63
GFI1Q99684 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.4□□□□□ -2.63
GFI1Q99684 RNU6-176P-201ENST00000517196 105 ntBASIC-1.4□□□□□ -2.63
GFI1Q99684 MT-TM-201ENST00000387377 68 ntBASIC-1.41□□□□□ -2.64
GFI1Q99684 MIR4441-201ENST00000582623 100 ntBASIC-1.41□□□□□ -2.64
GFI1Q99684 RNU4-33P-201ENST00000364316 85 ntBASIC-1.42□□□□□ -2.64
GFI1Q99684 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.42□□□□□ -2.64
GFI1Q99684 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.42□□□□□ -2.64
GFI1Q99684 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.43□□□□□ -2.64
GFI1Q99684 MIR601-201ENST00000385256 79 ntBASIC-1.44□□□□□ -2.64
GFI1Q99684 SNX3P1X-201ENST00000414887 175 ntBASIC-1.44□□□□□ -2.64
GFI1Q99684 MIR365A-201ENST00000362260 87 ntBASIC-1.45□□□□□ -2.64
GFI1Q99684 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.45□□□□□ -2.64
GFI1Q99684 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
GFI1Q99684 AC139453.2-201ENST00000487255 133 ntBASIC-1.46□□□□□ -2.64
GFI1Q99684 RNA5SP331-201ENST00000364986 107 ntBASIC-1.47□□□□□ -2.64
GFI1Q99684 RNU6-345P-201ENST00000517001 107 ntBASIC-1.47□□□□□ -2.64
GFI1Q99684 MIR548AL-201ENST00000578416 97 ntBASIC-1.47□□□□□ -2.64
GFI1Q99684 RNY4P9-201ENST00000363194 97 ntBASIC-1.48□□□□□ -2.65
GFI1Q99684 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.48□□□□□ -2.65
GFI1Q99684 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.48□□□□□ -2.65
GFI1Q99684 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.49□□□□□ -2.65
GFI1Q99684 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.49□□□□□ -2.65
GFI1Q99684 AC079150.2-201ENST00000443733 78 ntBASIC-1.49□□□□□ -2.65
GFI1Q99684 RNA5SP224-201ENST00000365069 126 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms