Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SNORD45.2-201ENST00000363552 72 ntBASIC-1.66□□□□□ -2.68
VPS52Q8N1B4 SNORD114-3-201ENST00000364969 75 ntBASIC-1.66□□□□□ -2.68
VPS52Q8N1B4 MIR548H1-201ENST00000408610 102 ntBASIC-1.66□□□□□ -2.68
VPS52Q8N1B4 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
VPS52Q8N1B4 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.67□□□□□ -2.68
VPS52Q8N1B4 MIR487B-201ENST00000385021 84 ntBASIC-1.67□□□□□ -2.68
VPS52Q8N1B4 MIR4441-201ENST00000582623 100 ntBASIC-1.67□□□□□ -2.68
VPS52Q8N1B4 MIR1207-201ENST00000408249 87 ntBASIC-1.69□□□□□ -2.68
VPS52Q8N1B4 AC139453.2-201ENST00000487255 133 ntBASIC-1.7□□□□□ -2.68
VPS52Q8N1B4 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.7□□□□□ -2.68
VPS52Q8N1B4 AC013734.1-201ENST00000619329 111 ntBASIC-1.7□□□□□ -2.68
VPS52Q8N1B4 SNORD18.1-201ENST00000363807 70 ntBASIC-1.71□□□□□ -2.68
VPS52Q8N1B4 RNU6-361P-201ENST00000364454 107 ntBASIC-1.73□□□□□ -2.69
VPS52Q8N1B4 RNU6-983P-201ENST00000516004 103 ntBASIC-1.74□□□□□ -2.69
VPS52Q8N1B4 RNU6-530P-201ENST00000391180 107 ntBASIC-1.75□□□□□ -2.69
VPS52Q8N1B4 MIR548X-201ENST00000580069 75 ntBASIC-1.75□□□□□ -2.69
VPS52Q8N1B4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.77□□□□□ -2.69
VPS52Q8N1B4 MIR202-201ENST00000362219 110 ntBASIC-1.78□□□□□ -2.69
VPS52Q8N1B4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.78□□□□□ -2.69
VPS52Q8N1B4 RNU6-829P-201ENST00000363700 112 ntBASIC-1.78□□□□□ -2.69
VPS52Q8N1B4 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.78□□□□□ -2.69
VPS52Q8N1B4 SNORD60-201ENST00000383903 83 ntBASIC-1.78□□□□□ -2.69
VPS52Q8N1B4 MIR633-201ENST00000384821 98 ntBASIC-1.78□□□□□ -2.69
VPS52Q8N1B4 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.8□□□□□ -2.7
VPS52Q8N1B4 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.8□□□□□ -2.7
VPS52Q8N1B4 SNORA17.4-201ENST00000391287 132 ntBASIC-1.8□□□□□ -2.7
VPS52Q8N1B4 MIR548N-201ENST00000408742 75 ntBASIC-1.8□□□□□ -2.7
VPS52Q8N1B4 AC108019.1-201ENST00000512540 175 ntBASIC-1.8□□□□□ -2.7
VPS52Q8N1B4 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.81□□□□□ -2.7
VPS52Q8N1B4 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.82□□□□□ -2.7
VPS52Q8N1B4 SNORD113-4-201ENST00000364802 75 ntBASIC-1.82□□□□□ -2.7
VPS52Q8N1B4 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.82□□□□□ -2.7
VPS52Q8N1B4 MIR4756-201ENST00000577874 78 ntBASIC-1.82□□□□□ -2.7
VPS52Q8N1B4 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.83□□□□□ -2.7
VPS52Q8N1B4 AC079150.2-201ENST00000443733 78 ntBASIC-1.83□□□□□ -2.7
VPS52Q8N1B4 U6.97-201ENST00000636904 101 ntBASIC-1.83□□□□□ -2.7
VPS52Q8N1B4 SNORD18C-201ENST00000362704 69 ntBASIC-1.84□□□□□ -2.7
VPS52Q8N1B4 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.85□□□□□ -2.71
VPS52Q8N1B4 MIR4426-201ENST00000640330 63 ntBASIC-1.86□□□□□ -2.71
VPS52Q8N1B4 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.87□□□□□ -2.71
VPS52Q8N1B4 RNY4P27-201ENST00000363341 96 ntBASIC-1.88□□□□□ -2.71
VPS52Q8N1B4 MIR581-201ENST00000384895 96 ntBASIC-1.88□□□□□ -2.71
VPS52Q8N1B4 MIR3123-201ENST00000583417 75 ntBASIC-1.88□□□□□ -2.71
VPS52Q8N1B4 MIR664B-201ENST00000626756 61 ntBASIC-1.89□□□□□ -2.71
VPS52Q8N1B4 RNU6-499P-201ENST00000365615 107 ntBASIC-1.9□□□□□ -2.71
VPS52Q8N1B4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.9□□□□□ -2.71
VPS52Q8N1B4 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.91□□□□□ -2.72
VPS52Q8N1B4 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.91□□□□□ -2.72
VPS52Q8N1B4 RNU6-176P-201ENST00000517196 105 ntBASIC-1.92□□□□□ -2.72
VPS52Q8N1B4 RNU6-788P-201ENST00000390967 104 ntBASIC-1.93□□□□□ -2.72
VPS52Q8N1B4 RNU6-841P-201ENST00000383872 107 ntBASIC-1.94□□□□□ -2.72
VPS52Q8N1B4 RNU6-980P-201ENST00000516925 103 ntBASIC-1.94□□□□□ -2.72
VPS52Q8N1B4 RNU6-742P-201ENST00000365289 107 ntBASIC-1.95□□□□□ -2.72
VPS52Q8N1B4 RNU6-300P-201ENST00000459080 104 ntBASIC-1.95□□□□□ -2.72
VPS52Q8N1B4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.96□□□□□ -2.72
VPS52Q8N1B4 RNU4-33P-201ENST00000364316 85 ntBASIC-1.97□□□□□ -2.72
VPS52Q8N1B4 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.97□□□□□ -2.72
VPS52Q8N1B4 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.97□□□□□ -2.72
VPS52Q8N1B4 MIR548AM-201ENST00000584298 74 ntBASIC-1.97□□□□□ -2.72
VPS52Q8N1B4 RNU4-88P-201ENST00000411220 86 ntBASIC-2□□□□□ -2.73
VPS52Q8N1B4 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.01□□□□□ -2.73
VPS52Q8N1B4 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.02□□□□□ -2.73
VPS52Q8N1B4 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.02□□□□□ -2.73
VPS52Q8N1B4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
VPS52Q8N1B4 MIR379-201ENST00000362218 67 ntBASIC-2.03□□□□□ -2.73
VPS52Q8N1B4 RNA5SP405-201ENST00000363059 114 ntBASIC-2.04□□□□□ -2.74
VPS52Q8N1B4 RNU6-68P-201ENST00000516576 104 ntBASIC-2.04□□□□□ -2.74
VPS52Q8N1B4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.05□□□□□ -2.74
VPS52Q8N1B4 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.06□□□□□ -2.74
VPS52Q8N1B4 RNU6-118P-201ENST00000516552 102 ntBASIC-2.06□□□□□ -2.74
VPS52Q8N1B4 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.08□□□□□ -2.74
VPS52Q8N1B4 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.09□□□□□ -2.74
VPS52Q8N1B4 MIR3139-201ENST00000579145 76 ntBASIC-2.09□□□□□ -2.74
VPS52Q8N1B4 RNU6-194P-201ENST00000363862 105 ntBASIC-2.1□□□□□ -2.75
VPS52Q8N1B4 MIR548AL-201ENST00000578416 97 ntBASIC-2.11□□□□□ -2.75
VPS52Q8N1B4 MIR548W-201ENST00000581970 74 ntBASIC-2.11□□□□□ -2.75
VPS52Q8N1B4 snoU13.10-201ENST00000459301 103 ntBASIC-2.13□□□□□ -2.75
VPS52Q8N1B4 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.13□□□□□ -2.75
VPS52Q8N1B4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.15□□□□□ -2.75
VPS52Q8N1B4 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.16□□□□□ -2.76
VPS52Q8N1B4 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.16□□□□□ -2.76
VPS52Q8N1B4 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.17□□□□□ -2.76
VPS52Q8N1B4 MT-TM-201ENST00000387377 68 ntBASIC-2.17□□□□□ -2.76
VPS52Q8N1B4 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.17□□□□□ -2.76
VPS52Q8N1B4 RNU6-838P-201ENST00000363399 108 ntBASIC-2.21□□□□□ -2.76
VPS52Q8N1B4 RNU6-119P-201ENST00000364882 107 ntBASIC-2.21□□□□□ -2.76
VPS52Q8N1B4 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.21□□□□□ -2.76
VPS52Q8N1B4 MIR4317-201ENST00000637586 65 ntBASIC-2.21□□□□□ -2.76
VPS52Q8N1B4 RNU6-912P-201ENST00000363800 104 ntBASIC-2.22□□□□□ -2.76
VPS52Q8N1B4 RNU6-936P-201ENST00000384005 107 ntBASIC-2.22□□□□□ -2.76
VPS52Q8N1B4 RNU6-614P-201ENST00000384369 107 ntBASIC-2.22□□□□□ -2.76
VPS52Q8N1B4 U6.59-201ENST00000615686 107 ntBASIC-2.22□□□□□ -2.76
VPS52Q8N1B4 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.23□□□□□ -2.77
VPS52Q8N1B4 MIR496-201ENST00000385226 102 ntBASIC-2.23□□□□□ -2.77
VPS52Q8N1B4 MIR548H4-201ENST00000408689 111 ntBASIC-2.23□□□□□ -2.77
VPS52Q8N1B4 MIR4748-201ENST00000578076 82 ntBASIC-2.23□□□□□ -2.77
VPS52Q8N1B4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.23□□□□□ -2.77
VPS52Q8N1B4 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.24□□□□□ -2.77
VPS52Q8N1B4 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.26□□□□□ -2.77
VPS52Q8N1B4 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms