Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SNORA25.4-201ENST00000363666 124 ntBASIC-1.54□□□□□ -2.66
CCDC71Q8IV32 MIR7978-201ENST00000636158 59 ntBASIC-1.54□□□□□ -2.66
CCDC71Q8IV32 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 SNORD78.1-201ENST00000390866 65 ntBASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 SNORD30.1-201ENST00000391309 70 ntBASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 MIR466-201ENST00000580653 84 ntBASIC-1.55□□□□□ -2.66
CCDC71Q8IV32 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.56□□□□□ -2.66
CCDC71Q8IV32 MIR579-201ENST00000385221 98 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 MIR125B1-201ENST00000385236 88 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 RNU7-160P-201ENST00000516660 62 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.57□□□□□ -2.66
CCDC71Q8IV32 SNORA27.2-201ENST00000363365 126 ntBASIC-1.58□□□□□ -2.66
CCDC71Q8IV32 SNORA25.5-201ENST00000363782 126 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-669P-201ENST00000365575 107 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-649P-201ENST00000384463 107 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-258P-201ENST00000390884 101 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 MIR3123-201ENST00000583417 75 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 MIR7110-201ENST00000612638 86 ntBASIC-1.59□□□□□ -2.66
CCDC71Q8IV32 RNU6-695P-201ENST00000391157 104 ntBASIC-1.6□□□□□ -2.67
CCDC71Q8IV32 RNU6-539P-201ENST00000516665 103 ntBASIC-1.6□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.61□□□□□ -2.67
CCDC71Q8IV32 SNORD63.2-201ENST00000516303 64 ntBASIC-1.61□□□□□ -2.67
CCDC71Q8IV32 RNU6-122P-201ENST00000516818 107 ntBASIC-1.61□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.62□□□□□ -2.67
CCDC71Q8IV32 AC005520.4-201ENST00000604337 90 ntBASIC-1.62□□□□□ -2.67
CCDC71Q8IV32 U6.111-201ENST00000636093 83 ntBASIC-1.62□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 RNU6-231P-201ENST00000517122 103 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 AC120024.2-201ENST00000576526 175 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 MIR4511-201ENST00000582784 87 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 AC103706.3-201ENST00000636297 85 ntBASIC-1.63□□□□□ -2.67
CCDC71Q8IV32 RNA5SP225-201ENST00000410874 135 ntBASIC-1.64□□□□□ -2.67
CCDC71Q8IV32 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.64□□□□□ -2.67
CCDC71Q8IV32 MIR4662A-201ENST00000637499 67 ntBASIC-1.66□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.67□□□□□ -2.68
CCDC71Q8IV32 RNU6-987P-201ENST00000384759 104 ntBASIC-1.67□□□□□ -2.68
CCDC71Q8IV32 MIR4679-1-201ENST00000637619 75 ntBASIC-1.67□□□□□ -2.68
CCDC71Q8IV32 RNU6-810P-201ENST00000364001 107 ntBASIC-1.68□□□□□ -2.68
CCDC71Q8IV32 RNU6-828P-201ENST00000364876 107 ntBASIC-1.68□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.68□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.69□□□□□ -2.68
CCDC71Q8IV32 SNORD116.2-201ENST00000391251 93 ntBASIC-1.69□□□□□ -2.68
CCDC71Q8IV32 RNU7-119P-201ENST00000459279 63 ntBASIC-1.69□□□□□ -2.68
CCDC71Q8IV32 RNU6-940P-201ENST00000363433 104 ntBASIC-1.7□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.7□□□□□ -2.68
CCDC71Q8IV32 RNU6-776P-201ENST00000364403 104 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-563P-201ENST00000364872 108 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-974P-201ENST00000384099 108 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNA5SP106-201ENST00000517274 100 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 FTX_4.1-201ENST00000616291 147 ntBASIC-1.71□□□□□ -2.68
CCDC71Q8IV32 RNU6-800P-201ENST00000384473 103 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 SNORA40B-201ENST00000385573 128 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 MIR548W-201ENST00000581970 74 ntBASIC-1.72□□□□□ -2.68
CCDC71Q8IV32 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.73□□□□□ -2.69
CCDC71Q8IV32 RNU6-141P-201ENST00000410499 105 ntBASIC-1.73□□□□□ -2.69
CCDC71Q8IV32 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.73□□□□□ -2.69
CCDC71Q8IV32 RNY4P9-201ENST00000363194 97 ntBASIC-1.74□□□□□ -2.69
CCDC71Q8IV32 MIR5693-201ENST00000577722 73 ntBASIC-1.74□□□□□ -2.69
CCDC71Q8IV32 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 RNU6-520P-201ENST00000384717 104 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 SNORA40.16-201ENST00000517238 121 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.77□□□□□ -2.69
CCDC71Q8IV32 MIR3938-201ENST00000582157 103 ntBASIC-1.78□□□□□ -2.69
CCDC71Q8IV32 AC013734.1-201ENST00000619329 111 ntBASIC-1.78□□□□□ -2.69
CCDC71Q8IV32 RNY3P8-201ENST00000411366 126 ntBASIC-1.8□□□□□ -2.7
CCDC71Q8IV32 snoU13.10-201ENST00000459301 103 ntBASIC-1.8□□□□□ -2.7
CCDC71Q8IV32 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 MIR509-1-201ENST00000385265 94 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 MIR509-2-201ENST00000390724 91 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 AC110620.1-201ENST00000416042 228 ntBASIC-1.81□□□□□ -2.7
CCDC71Q8IV32 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.82□□□□□ -2.7
CCDC71Q8IV32 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.82□□□□□ -2.7
CCDC71Q8IV32 SNORD45.2-201ENST00000363552 72 ntBASIC-1.83□□□□□ -2.7
CCDC71Q8IV32 RNY4P10-201ENST00000365571 96 ntBASIC-1.84□□□□□ -2.7
CCDC71Q8IV32 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.84□□□□□ -2.7
CCDC71Q8IV32 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.85□□□□□ -2.71
CCDC71Q8IV32 SNORD60-201ENST00000383903 83 ntBASIC-1.85□□□□□ -2.71
CCDC71Q8IV32 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.85□□□□□ -2.71
CCDC71Q8IV32 RNU6-361P-201ENST00000364454 107 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 RNU6-471P-201ENST00000383944 106 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 AC097484.2-201ENST00000509147 251 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 U6.97-201ENST00000636904 101 ntBASIC-1.87□□□□□ -2.71
CCDC71Q8IV32 SNORD18C-201ENST00000362704 69 ntBASIC-1.88□□□□□ -2.71
CCDC71Q8IV32 AL451105.1-201ENST00000450005 189 ntBASIC-1.88□□□□□ -2.71
CCDC71Q8IV32 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.89□□□□□ -2.71
CCDC71Q8IV32 AC114801.3-201ENST00000510231 177 ntBASIC-1.89□□□□□ -2.71
CCDC71Q8IV32 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 MIR202-201ENST00000362219 110 ntBASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 SNORA17.4-201ENST00000391287 132 ntBASIC-1.9□□□□□ -2.71
CCDC71Q8IV32 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.91□□□□□ -2.72
CCDC71Q8IV32 MIR548N-201ENST00000408742 75 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms