Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 RNU6-742P-201ENST00000365289 107 ntBASIC-1.62□□□□□ -2.67
CHMP1BQ7LBR1 MIR4770-201ENST00000579149 58 ntBASIC-1.62□□□□□ -2.67
CHMP1BQ7LBR1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.63□□□□□ -2.67
CHMP1BQ7LBR1 MIR548X-201ENST00000580069 75 ntBASIC-1.63□□□□□ -2.67
CHMP1BQ7LBR1 MIR4426-201ENST00000640330 63 ntBASIC-1.63□□□□□ -2.67
CHMP1BQ7LBR1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.64□□□□□ -2.67
CHMP1BQ7LBR1 SNORD60-201ENST00000383903 83 ntBASIC-1.65□□□□□ -2.67
CHMP1BQ7LBR1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.66□□□□□ -2.68
CHMP1BQ7LBR1 MIR548H1-201ENST00000408610 102 ntBASIC-1.66□□□□□ -2.68
CHMP1BQ7LBR1 AC139453.2-201ENST00000487255 133 ntBASIC-1.66□□□□□ -2.68
CHMP1BQ7LBR1 AC125388.1-201ENST00000459631 156 ntBASIC-1.67□□□□□ -2.68
CHMP1BQ7LBR1 RNU6-68P-201ENST00000516576 104 ntBASIC-1.67□□□□□ -2.68
CHMP1BQ7LBR1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.67□□□□□ -2.68
CHMP1BQ7LBR1 SNORD18C-201ENST00000362704 69 ntBASIC-1.68□□□□□ -2.68
CHMP1BQ7LBR1 MIR3165-201ENST00000579874 75 ntBASIC-1.69□□□□□ -2.68
CHMP1BQ7LBR1 SNORD45.2-201ENST00000363552 72 ntBASIC-1.7□□□□□ -2.68
CHMP1BQ7LBR1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.7□□□□□ -2.68
CHMP1BQ7LBR1 AC079150.2-201ENST00000443733 78 ntBASIC-1.71□□□□□ -2.68
CHMP1BQ7LBR1 MIR548W-201ENST00000581970 74 ntBASIC-1.71□□□□□ -2.68
CHMP1BQ7LBR1 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.73□□□□□ -2.69
CHMP1BQ7LBR1 snoU13.10-201ENST00000459301 103 ntBASIC-1.73□□□□□ -2.69
CHMP1BQ7LBR1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.73□□□□□ -2.69
CHMP1BQ7LBR1 MIR548AM-201ENST00000584298 74 ntBASIC-1.73□□□□□ -2.69
CHMP1BQ7LBR1 MIR198-201ENST00000637333 62 ntBASIC-1.73□□□□□ -2.69
CHMP1BQ7LBR1 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.74□□□□□ -2.69
CHMP1BQ7LBR1 RNU6-300P-201ENST00000459080 104 ntBASIC-1.75□□□□□ -2.69
CHMP1BQ7LBR1 MIR601-201ENST00000385256 79 ntBASIC-1.76□□□□□ -2.69
CHMP1BQ7LBR1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.76□□□□□ -2.69
CHMP1BQ7LBR1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.76□□□□□ -2.69
CHMP1BQ7LBR1 RNU4-33P-201ENST00000364316 85 ntBASIC-1.8□□□□□ -2.7
CHMP1BQ7LBR1 AC108019.1-201ENST00000512540 175 ntBASIC-1.8□□□□□ -2.7
CHMP1BQ7LBR1 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.81□□□□□ -2.7
CHMP1BQ7LBR1 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.82□□□□□ -2.7
CHMP1BQ7LBR1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.83□□□□□ -2.7
CHMP1BQ7LBR1 RNU6-499P-201ENST00000365615 107 ntBASIC-1.83□□□□□ -2.7
CHMP1BQ7LBR1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.83□□□□□ -2.7
CHMP1BQ7LBR1 MIR4756-201ENST00000577874 78 ntBASIC-1.84□□□□□ -2.7
CHMP1BQ7LBR1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.85□□□□□ -2.71
CHMP1BQ7LBR1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.86□□□□□ -2.71
CHMP1BQ7LBR1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.87□□□□□ -2.71
CHMP1BQ7LBR1 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.87□□□□□ -2.71
CHMP1BQ7LBR1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.88□□□□□ -2.71
CHMP1BQ7LBR1 RNU6-176P-201ENST00000517196 105 ntBASIC-1.88□□□□□ -2.71
CHMP1BQ7LBR1 MIR548H4-201ENST00000408689 111 ntBASIC-1.89□□□□□ -2.71
CHMP1BQ7LBR1 MIR379-201ENST00000362218 67 ntBASIC-1.9□□□□□ -2.71
CHMP1BQ7LBR1 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.91□□□□□ -2.72
CHMP1BQ7LBR1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.92□□□□□ -2.72
CHMP1BQ7LBR1 MIR548AL-201ENST00000578416 97 ntBASIC-1.92□□□□□ -2.72
CHMP1BQ7LBR1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.92□□□□□ -2.72
CHMP1BQ7LBR1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.93□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.95□□□□□ -2.72
CHMP1BQ7LBR1 RNU6-788P-201ENST00000390967 104 ntBASIC-1.96□□□□□ -2.72
CHMP1BQ7LBR1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.96□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 U4.2-201ENST00000618561 85 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 MIR664B-201ENST00000626756 61 ntBASIC-1.97□□□□□ -2.72
CHMP1BQ7LBR1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.98□□□□□ -2.73
CHMP1BQ7LBR1 AC097484.2-201ENST00000509147 251 ntBASIC-1.98□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.99□□□□□ -2.73
CHMP1BQ7LBR1 RNU6-936P-201ENST00000384005 107 ntBASIC-1.99□□□□□ -2.73
CHMP1BQ7LBR1 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.99□□□□□ -2.73
CHMP1BQ7LBR1 MIRLET7A2-201ENST00000362105 72 ntBASIC-2□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.211-201ENST00000364164 101 ntBASIC-2□□□□□ -2.73
CHMP1BQ7LBR1 MIR365A-201ENST00000362260 87 ntBASIC-2.01□□□□□ -2.73
CHMP1BQ7LBR1 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.01□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.01□□□□□ -2.73
CHMP1BQ7LBR1 MIR1254-1-201ENST00000408257 97 ntBASIC-2.01□□□□□ -2.73
CHMP1BQ7LBR1 MIR1285-2-201ENST00000408311 88 ntBASIC-2.01□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.01□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.02□□□□□ -2.73
CHMP1BQ7LBR1 RNU6-838P-201ENST00000363399 108 ntBASIC-2.03□□□□□ -2.73
CHMP1BQ7LBR1 RNU6-753P-201ENST00000363926 107 ntBASIC-2.03□□□□□ -2.73
CHMP1BQ7LBR1 RNU6-983P-201ENST00000516004 103 ntBASIC-2.03□□□□□ -2.73
CHMP1BQ7LBR1 MIR4723-201ENST00000585070 81 ntBASIC-2.03□□□□□ -2.73
CHMP1BQ7LBR1 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.04□□□□□ -2.74
CHMP1BQ7LBR1 MIR1246-201ENST00000636535 73 ntBASIC-2.04□□□□□ -2.74
CHMP1BQ7LBR1 MIR4317-201ENST00000637586 65 ntBASIC-2.04□□□□□ -2.74
CHMP1BQ7LBR1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.05□□□□□ -2.74
CHMP1BQ7LBR1 MIR4441-201ENST00000582623 100 ntBASIC-2.06□□□□□ -2.74
CHMP1BQ7LBR1 RNU6-986P-201ENST00000363133 102 ntBASIC-2.07□□□□□ -2.74
CHMP1BQ7LBR1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.08□□□□□ -2.74
CHMP1BQ7LBR1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.08□□□□□ -2.74
CHMP1BQ7LBR1 RNU6-808P-201ENST00000391233 108 ntBASIC-2.09□□□□□ -2.74
CHMP1BQ7LBR1 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.1□□□□□ -2.75
CHMP1BQ7LBR1 FTX_4.1-201ENST00000616291 147 ntBASIC-2.1□□□□□ -2.75
CHMP1BQ7LBR1 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.11□□□□□ -2.75
CHMP1BQ7LBR1 RNU6-614P-201ENST00000384369 107 ntBASIC-2.11□□□□□ -2.75
CHMP1BQ7LBR1 U6.59-201ENST00000615686 107 ntBASIC-2.11□□□□□ -2.75
CHMP1BQ7LBR1 MIR548F3-201ENST00000408509 87 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms