Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.65□□□□□ -2.83
CSPG4Q6UVK1 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.65□□□□□ -2.83
CSPG4Q6UVK1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.65□□□□□ -2.83
CSPG4Q6UVK1 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.66□□□□□ -2.84
CSPG4Q6UVK1 RNU6-959P-201ENST00000384671 107 ntBASIC-2.66□□□□□ -2.84
CSPG4Q6UVK1 RNU6-257P-201ENST00000410238 98 ntBASIC-2.66□□□□□ -2.84
CSPG4Q6UVK1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.66□□□□□ -2.84
CSPG4Q6UVK1 MTND5P41-201ENST00000517498 206 ntBASIC-2.67□□□□□ -2.84
CSPG4Q6UVK1 AC062037.2-201ENST00000610137 73 ntBASIC-2.67□□□□□ -2.84
CSPG4Q6UVK1 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.67□□□□□ -2.84
CSPG4Q6UVK1 RNU6-907P-201ENST00000390924 102 ntBASIC-2.67□□□□□ -2.84
CSPG4Q6UVK1 MIR548F4-201ENST00000408515 105 ntBASIC-2.68□□□□□ -2.84
CSPG4Q6UVK1 RNU6-844P-201ENST00000517175 102 ntBASIC-2.68□□□□□ -2.84
CSPG4Q6UVK1 RNU4-85P-201ENST00000364675 123 ntBASIC-2.68□□□□□ -2.84
CSPG4Q6UVK1 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.68□□□□□ -2.84
CSPG4Q6UVK1 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.68□□□□□ -2.84
CSPG4Q6UVK1 RNU6-804P-201ENST00000384286 107 ntBASIC-2.69□□□□□ -2.84
CSPG4Q6UVK1 RNU7-120P-201ENST00000459334 63 ntBASIC-2.69□□□□□ -2.84
CSPG4Q6UVK1 MTATP8P1-201ENST00000467115 207 ntBASIC-2.69□□□□□ -2.84
CSPG4Q6UVK1 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.7□□□□□ -2.84
CSPG4Q6UVK1 RNU7-171P-201ENST00000459581 62 ntBASIC-2.7□□□□□ -2.84
CSPG4Q6UVK1 RNU6-836P-201ENST00000362920 107 ntBASIC-2.7□□□□□ -2.84
CSPG4Q6UVK1 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.7□□□□□ -2.84
CSPG4Q6UVK1 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.71□□□□□ -2.84
CSPG4Q6UVK1 MIR1302-5-201ENST00000408164 150 ntBASIC-2.71□□□□□ -2.84
CSPG4Q6UVK1 MIR4511-201ENST00000582784 87 ntBASIC-2.71□□□□□ -2.84
CSPG4Q6UVK1 MALAT1.1-201ENST00000618249 95 ntBASIC-2.72□□□□□ -2.84
CSPG4Q6UVK1 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.73□□□□□ -2.85
CSPG4Q6UVK1 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.73□□□□□ -2.85
CSPG4Q6UVK1 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.74□□□□□ -2.85
CSPG4Q6UVK1 RNU7-200P-201ENST00000516105 62 ntBASIC-2.74□□□□□ -2.85
CSPG4Q6UVK1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.74□□□□□ -2.85
CSPG4Q6UVK1 AL031737.1-201ENST00000450125 223 ntBASIC-2.74□□□□□ -2.85
CSPG4Q6UVK1 RNU4-33P-201ENST00000364316 85 ntBASIC-2.75□□□□□ -2.85
CSPG4Q6UVK1 RNA5SP449-201ENST00000516871 130 ntBASIC-2.75□□□□□ -2.85
CSPG4Q6UVK1 RNU6-122P-201ENST00000516818 107 ntBASIC-2.75□□□□□ -2.85
CSPG4Q6UVK1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.75□□□□□ -2.85
CSPG4Q6UVK1 MIR4679-1-201ENST00000637619 75 ntBASIC-2.76□□□□□ -2.85
CSPG4Q6UVK1 MIR5588-201ENST00000581890 63 ntBASIC-2.76□□□□□ -2.85
CSPG4Q6UVK1 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.77□□□□□ -2.85
CSPG4Q6UVK1 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.77□□□□□ -2.85
CSPG4Q6UVK1 RNU6-687P-201ENST00000516443 89 ntBASIC-2.77□□□□□ -2.85
CSPG4Q6UVK1 MIR450A1-201ENST00000362262 91 ntBASIC-2.77□□□□□ -2.85
CSPG4Q6UVK1 RNU6-634P-201ENST00000459134 106 ntBASIC-2.77□□□□□ -2.85
CSPG4Q6UVK1 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.78□□□□□ -2.85
CSPG4Q6UVK1 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.78□□□□□ -2.85
CSPG4Q6UVK1 RNU6-589P-201ENST00000516485 107 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 AC026407.1-201ENST00000518369 204 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 MIR4666B-201ENST00000578142 81 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 MIR4712-201ENST00000583750 82 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 AC008737.2-201ENST00000599446 118 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 MIR606-201ENST00000384851 96 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 MTCYBP9-201ENST00000431021 303 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 U6atac.1-201ENST00000616025 117 ntBASIC-2.79□□□□□ -2.86
CSPG4Q6UVK1 RNU6-200P-201ENST00000364743 107 ntBASIC-2.8□□□□□ -2.86
CSPG4Q6UVK1 RNU6-255P-201ENST00000516957 105 ntBASIC-2.8□□□□□ -2.86
CSPG4Q6UVK1 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.8□□□□□ -2.86
CSPG4Q6UVK1 RNU6-916P-201ENST00000516088 109 ntBASIC-2.8□□□□□ -2.86
CSPG4Q6UVK1 AL117187.1-201ENST00000555482 181 ntBASIC-2.8□□□□□ -2.86
CSPG4Q6UVK1 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.81□□□□□ -2.86
CSPG4Q6UVK1 AP000770.2-201ENST00000623694 100 ntBASIC-2.82□□□□□ -2.86
CSPG4Q6UVK1 MIR3134-201ENST00000579433 74 ntBASIC-2.84□□□□□ -2.86
CSPG4Q6UVK1 AC110620.1-201ENST00000416042 228 ntBASIC-2.84□□□□□ -2.86
CSPG4Q6UVK1 MIR1245B-201ENST00000636115 69 ntBASIC-2.84□□□□□ -2.86
CSPG4Q6UVK1 MTCYBP6-201ENST00000441810 138 ntBASIC-2.85□□□□□ -2.87
CSPG4Q6UVK1 RNU6-388P-201ENST00000517012 105 ntBASIC-2.85□□□□□ -2.87
CSPG4Q6UVK1 RNU6-389P-201ENST00000517048 105 ntBASIC-2.85□□□□□ -2.87
CSPG4Q6UVK1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.85□□□□□ -2.87
CSPG4Q6UVK1 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 SNORD116-14-201ENST00000383894 92 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 SNORD116-17-201ENST00000383929 92 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 SNORD116-15-201ENST00000384445 92 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 SNORD116-19-201ENST00000384729 92 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 MIR3908-201ENST00000579798 126 ntBASIC-2.86□□□□□ -2.87
CSPG4Q6UVK1 RNU6-787P-201ENST00000384032 107 ntBASIC-2.87□□□□□ -2.87
CSPG4Q6UVK1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.87□□□□□ -2.87
CSPG4Q6UVK1 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.87□□□□□ -2.87
CSPG4Q6UVK1 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.87□□□□□ -2.87
CSPG4Q6UVK1 RNU6-539P-201ENST00000516665 103 ntBASIC-2.87□□□□□ -2.87
CSPG4Q6UVK1 AC103706.3-201ENST00000636297 85 ntBASIC-2.87□□□□□ -2.87
CSPG4Q6UVK1 Y_RNA.535-201ENST00000384612 99 ntBASIC-2.88□□□□□ -2.87
CSPG4Q6UVK1 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.88□□□□□ -2.87
CSPG4Q6UVK1 MIR1302-3-201ENST00000408128 138 ntBASIC-2.88□□□□□ -2.87
CSPG4Q6UVK1 RNU6-209P-201ENST00000384118 107 ntBASIC-2.89□□□□□ -2.87
CSPG4Q6UVK1 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.9□□□□□ -2.87
CSPG4Q6UVK1 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.9□□□□□ -2.87
CSPG4Q6UVK1 MIR568-201ENST00000385036 95 ntBASIC-2.9□□□□□ -2.87
CSPG4Q6UVK1 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.91□□□□□ -2.88
CSPG4Q6UVK1 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.92□□□□□ -2.88
CSPG4Q6UVK1 RNU6-738P-201ENST00000384531 106 ntBASIC-2.93□□□□□ -2.88
CSPG4Q6UVK1 RNU6-640P-201ENST00000363693 105 ntBASIC-2.93□□□□□ -2.88
CSPG4Q6UVK1 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.93□□□□□ -2.88
CSPG4Q6UVK1 MT-TG-201ENST00000387429 68 ntBASIC-2.94□□□□□ -2.88
CSPG4Q6UVK1 AC008267.6-201ENST00000441664 139 ntBASIC-2.94□□□□□ -2.88
CSPG4Q6UVK1 U7.4-201ENST00000614961 63 ntBASIC-2.94□□□□□ -2.88
CSPG4Q6UVK1 AL117351.2-201ENST00000513571 157 ntBASIC-2.94□□□□□ -2.88
CSPG4Q6UVK1 MIR548S-201ENST00000581352 82 ntBASIC-2.94□□□□□ -2.88
CSPG4Q6UVK1 RNU6-886P-201ENST00000384319 105 ntBASIC-2.96□□□□□ -2.88
CSPG4Q6UVK1 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms