Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RNU6-122P-201ENST00000516818 107 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 MIR7110-201ENST00000612638 86 ntBASIC-1.36□□□□□ -2.63
SRPXP78539 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.36□□□□□ -2.63
SRPXP78539 RNU6-79P-201ENST00000362511 107 ntBASIC-1.37□□□□□ -2.63
SRPXP78539 RNU6-810P-201ENST00000364001 107 ntBASIC-1.38□□□□□ -2.63
SRPXP78539 SNORD116.2-201ENST00000391251 93 ntBASIC-1.38□□□□□ -2.63
SRPXP78539 RNU6-194P-201ENST00000363862 105 ntBASIC-1.39□□□□□ -2.63
SRPXP78539 RNU6-974P-201ENST00000384099 108 ntBASIC-1.39□□□□□ -2.63
SRPXP78539 RNU6-800P-201ENST00000384473 103 ntBASIC-1.39□□□□□ -2.63
SRPXP78539 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.4□□□□□ -2.63
SRPXP78539 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.4□□□□□ -2.63
SRPXP78539 AC103706.3-201ENST00000636297 85 ntBASIC-1.4□□□□□ -2.63
SRPXP78539 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.41□□□□□ -2.64
SRPXP78539 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.41□□□□□ -2.64
SRPXP78539 RNU4-88P-201ENST00000411220 86 ntBASIC-1.41□□□□□ -2.64
SRPXP78539 MIR548AM-201ENST00000584298 74 ntBASIC-1.41□□□□□ -2.64
SRPXP78539 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.42□□□□□ -2.64
SRPXP78539 RNU6-841P-201ENST00000383872 107 ntBASIC-1.42□□□□□ -2.64
SRPXP78539 RNU6-563P-201ENST00000364872 108 ntBASIC-1.43□□□□□ -2.64
SRPXP78539 RNY4-201ENST00000516507 96 ntBASIC-1.43□□□□□ -2.64
SRPXP78539 MIR23C-201ENST00000579846 100 ntBASIC-1.43□□□□□ -2.64
SRPXP78539 SNORA27.2-201ENST00000363365 126 ntBASIC-1.44□□□□□ -2.64
SRPXP78539 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.44□□□□□ -2.64
SRPXP78539 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.44□□□□□ -2.64
SRPXP78539 RNU7-160P-201ENST00000516660 62 ntBASIC-1.44□□□□□ -2.64
SRPXP78539 AC120024.2-201ENST00000576526 175 ntBASIC-1.44□□□□□ -2.64
SRPXP78539 RNU6-695P-201ENST00000391157 104 ntBASIC-1.45□□□□□ -2.64
SRPXP78539 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.45□□□□□ -2.64
SRPXP78539 MIR4748-201ENST00000578076 82 ntBASIC-1.45□□□□□ -2.64
SRPXP78539 MIR3123-201ENST00000583417 75 ntBASIC-1.45□□□□□ -2.64
SRPXP78539 RNU6-940P-201ENST00000363433 104 ntBASIC-1.46□□□□□ -2.64
SRPXP78539 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.46□□□□□ -2.64
SRPXP78539 SNORA40B-201ENST00000385573 128 ntBASIC-1.47□□□□□ -2.64
SRPXP78539 SNORA40.16-201ENST00000517238 121 ntBASIC-1.47□□□□□ -2.64
SRPXP78539 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.47□□□□□ -2.64
SRPXP78539 RNU6-828P-201ENST00000364876 107 ntBASIC-1.48□□□□□ -2.65
SRPXP78539 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.48□□□□□ -2.65
SRPXP78539 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.49□□□□□ -2.65
SRPXP78539 MIR466-201ENST00000580653 84 ntBASIC-1.49□□□□□ -2.65
SRPXP78539 RNY3P8-201ENST00000411366 126 ntBASIC-1.5□□□□□ -2.65
SRPXP78539 RNU7-119P-201ENST00000459279 63 ntBASIC-1.5□□□□□ -2.65
SRPXP78539 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.51□□□□□ -2.65
SRPXP78539 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
SRPXP78539 AC110620.1-201ENST00000416042 228 ntBASIC-1.51□□□□□ -2.65
SRPXP78539 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.51□□□□□ -2.65
SRPXP78539 SNORA72.7-201ENST00000516349 94 ntBASIC-1.51□□□□□ -2.65
SRPXP78539 AC114801.3-201ENST00000510231 177 ntBASIC-1.52□□□□□ -2.65
SRPXP78539 MIR3938-201ENST00000582157 103 ntBASIC-1.52□□□□□ -2.65
SRPXP78539 AC013734.1-201ENST00000619329 111 ntBASIC-1.52□□□□□ -2.65
SRPXP78539 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.53□□□□□ -2.65
SRPXP78539 RNU6-520P-201ENST00000384717 104 ntBASIC-1.56□□□□□ -2.66
SRPXP78539 MIR548W-201ENST00000581970 74 ntBASIC-1.57□□□□□ -2.66
SRPXP78539 U6.97-201ENST00000636904 101 ntBASIC-1.57□□□□□ -2.66
SRPXP78539 RNU6-471P-201ENST00000383944 106 ntBASIC-1.58□□□□□ -2.66
SRPXP78539 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.58□□□□□ -2.66
SRPXP78539 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.59□□□□□ -2.66
SRPXP78539 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.59□□□□□ -2.66
SRPXP78539 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
SRPXP78539 RNU6-230P-201ENST00000362457 104 ntBASIC-1.6□□□□□ -2.67
SRPXP78539 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.61□□□□□ -2.67
SRPXP78539 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.61□□□□□ -2.67
SRPXP78539 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.61□□□□□ -2.67
SRPXP78539 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.61□□□□□ -2.67
SRPXP78539 MIR202-201ENST00000362219 110 ntBASIC-1.62□□□□□ -2.67
SRPXP78539 FTX_4.1-201ENST00000616291 147 ntBASIC-1.62□□□□□ -2.67
SRPXP78539 snoU13.10-201ENST00000459301 103 ntBASIC-1.63□□□□□ -2.67
SRPXP78539 RNU6-803P-201ENST00000516034 102 ntBASIC-1.63□□□□□ -2.67
SRPXP78539 RNU6-638P-201ENST00000516582 104 ntBASIC-1.63□□□□□ -2.67
SRPXP78539 RNU6-530P-201ENST00000391180 107 ntBASIC-1.65□□□□□ -2.67
SRPXP78539 RNU6-141P-201ENST00000410499 105 ntBASIC-1.65□□□□□ -2.67
SRPXP78539 AL451105.1-201ENST00000450005 189 ntBASIC-1.65□□□□□ -2.67
SRPXP78539 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.66□□□□□ -2.68
SRPXP78539 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.66□□□□□ -2.68
SRPXP78539 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.67□□□□□ -2.68
SRPXP78539 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.68□□□□□ -2.68
SRPXP78539 RNY4P9-201ENST00000363194 97 ntBASIC-1.69□□□□□ -2.68
SRPXP78539 MIR581-201ENST00000384895 96 ntBASIC-1.7□□□□□ -2.68
SRPXP78539 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.7□□□□□ -2.68
SRPXP78539 RNU6-419P-201ENST00000517030 63 ntBASIC-1.7□□□□□ -2.68
SRPXP78539 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.7□□□□□ -2.68
SRPXP78539 RNU6-446P-201ENST00000362827 106 ntBASIC-1.71□□□□□ -2.68
SRPXP78539 SNORD45.2-201ENST00000363552 72 ntBASIC-1.71□□□□□ -2.68
SRPXP78539 SNORD60-201ENST00000383903 83 ntBASIC-1.71□□□□□ -2.68
SRPXP78539 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.71□□□□□ -2.68
SRPXP78539 RNU6-361P-201ENST00000364454 107 ntBASIC-1.72□□□□□ -2.68
SRPXP78539 SNORA17.4-201ENST00000391287 132 ntBASIC-1.72□□□□□ -2.68
SRPXP78539 AC097484.2-201ENST00000509147 251 ntBASIC-1.72□□□□□ -2.68
SRPXP78539 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.72□□□□□ -2.68
SRPXP78539 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.73□□□□□ -2.69
SRPXP78539 MIR5693-201ENST00000577722 73 ntBASIC-1.73□□□□□ -2.69
SRPXP78539 MIR548N-201ENST00000408742 75 ntBASIC-1.74□□□□□ -2.69
SRPXP78539 MIR4426-201ENST00000640330 63 ntBASIC-1.74□□□□□ -2.69
SRPXP78539 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.75□□□□□ -2.69
SRPXP78539 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.75□□□□□ -2.69
SRPXP78539 SNORD18C-201ENST00000362704 69 ntBASIC-1.75□□□□□ -2.69
SRPXP78539 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.76□□□□□ -2.69
SRPXP78539 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.76□□□□□ -2.69
SRPXP78539 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.76□□□□□ -2.69
SRPXP78539 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.76□□□□□ -2.69
SRPXP78539 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms