Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SNORD18C-201ENST00000362704 69 ntBASIC-1.09□□□□□ -2.58
RAE1P78406 RNU6-753P-201ENST00000363926 107 ntBASIC-1.09□□□□□ -2.58
RAE1P78406 RNU6-10P-201ENST00000384036 107 ntBASIC-1.09□□□□□ -2.58
RAE1P78406 MIR4324-201ENST00000584846 72 ntBASIC-1.09□□□□□ -2.58
RAE1P78406 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.1□□□□□ -2.59
RAE1P78406 RNU6-695P-201ENST00000391157 104 ntBASIC-1.1□□□□□ -2.59
RAE1P78406 MIR548AL-201ENST00000578416 97 ntBASIC-1.1□□□□□ -2.59
RAE1P78406 RNU6-808P-201ENST00000391233 108 ntBASIC-1.11□□□□□ -2.59
RAE1P78406 RNU6-176P-201ENST00000517196 105 ntBASIC-1.11□□□□□ -2.59
RAE1P78406 RNU6-838P-201ENST00000363399 108 ntBASIC-1.13□□□□□ -2.59
RAE1P78406 MIR4520-1-201ENST00000582609 70 ntBASIC-1.14□□□□□ -2.59
RAE1P78406 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
RAE1P78406 SNX3P1X-201ENST00000414887 175 ntBASIC-1.15□□□□□ -2.59
RAE1P78406 AC138207.3-201ENST00000585289 166 ntBASIC-1.15□□□□□ -2.59
RAE1P78406 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.16□□□□□ -2.6
RAE1P78406 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.16□□□□□ -2.6
RAE1P78406 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.16□□□□□ -2.6
RAE1P78406 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.16□□□□□ -2.6
RAE1P78406 RNU6-68P-201ENST00000516576 104 ntBASIC-1.16□□□□□ -2.6
RAE1P78406 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.16□□□□□ -2.6
RAE1P78406 RNU6-706P-201ENST00000517229 104 ntBASIC-1.17□□□□□ -2.6
RAE1P78406 MIR3123-201ENST00000583417 75 ntBASIC-1.17□□□□□ -2.6
RAE1P78406 MIR548H4-201ENST00000408689 111 ntBASIC-1.18□□□□□ -2.6
RAE1P78406 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.18□□□□□ -2.6
RAE1P78406 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.19□□□□□ -2.6
RAE1P78406 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.2□□□□□ -2.6
RAE1P78406 MIR379-201ENST00000362218 67 ntBASIC-1.21□□□□□ -2.6
RAE1P78406 RNU6-930P-201ENST00000390938 100 ntBASIC-1.21□□□□□ -2.6
RAE1P78406 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.22□□□□□ -2.6
RAE1P78406 MIR548F3-201ENST00000408509 87 ntBASIC-1.22□□□□□ -2.6
RAE1P78406 RNU4-88P-201ENST00000411220 86 ntBASIC-1.22□□□□□ -2.6
RAE1P78406 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.22□□□□□ -2.6
RAE1P78406 MIR4317-201ENST00000637586 65 ntBASIC-1.22□□□□□ -2.6
RAE1P78406 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.23□□□□□ -2.61
RAE1P78406 RNU4-37P-201ENST00000410214 84 ntBASIC-1.23□□□□□ -2.61
RAE1P78406 MIR5591-201ENST00000578248 65 ntBASIC-1.23□□□□□ -2.61
RAE1P78406 MIR4770-201ENST00000579149 58 ntBASIC-1.23□□□□□ -2.61
RAE1P78406 RNU6-841P-201ENST00000383872 107 ntBASIC-1.24□□□□□ -2.61
RAE1P78406 RNU6-987P-201ENST00000384759 104 ntBASIC-1.24□□□□□ -2.61
RAE1P78406 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.25□□□□□ -2.61
RAE1P78406 RNA5SP86-201ENST00000390869 98 ntBASIC-1.25□□□□□ -2.61
RAE1P78406 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.25□□□□□ -2.61
RAE1P78406 RNU6-141P-201ENST00000410499 105 ntBASIC-1.26□□□□□ -2.61
RAE1P78406 MIR3165-201ENST00000579874 75 ntBASIC-1.26□□□□□ -2.61
RAE1P78406 RNU6-912P-201ENST00000363800 104 ntBASIC-1.27□□□□□ -2.61
RAE1P78406 MIR548H1-201ENST00000408610 102 ntBASIC-1.27□□□□□ -2.61
RAE1P78406 HLA-S-202ENST00000425174 53 ntBASIC-1.27□□□□□ -2.61
RAE1P78406 MIR3115-201ENST00000577915 68 ntBASIC-1.27□□□□□ -2.61
RAE1P78406 MIR548W-201ENST00000581970 74 ntBASIC-1.27□□□□□ -2.61
RAE1P78406 RNU6-986P-201ENST00000363133 102 ntBASIC-1.28□□□□□ -2.61
RAE1P78406 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.28□□□□□ -2.61
RAE1P78406 snoU13.10-201ENST00000459301 103 ntBASIC-1.28□□□□□ -2.61
RAE1P78406 MIR548AM-201ENST00000584298 74 ntBASIC-1.28□□□□□ -2.61
RAE1P78406 MIR198-201ENST00000637333 62 ntBASIC-1.28□□□□□ -2.61
RAE1P78406 MIR487B-201ENST00000385021 84 ntBASIC-1.29□□□□□ -2.62
RAE1P78406 MIR601-201ENST00000385256 79 ntBASIC-1.29□□□□□ -2.62
RAE1P78406 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.29□□□□□ -2.62
RAE1P78406 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.3□□□□□ -2.62
RAE1P78406 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.3□□□□□ -2.62
RAE1P78406 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.31□□□□□ -2.62
RAE1P78406 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.33□□□□□ -2.62
RAE1P78406 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.33□□□□□ -2.62
RAE1P78406 MIR545-201ENST00000385085 106 ntBASIC-1.34□□□□□ -2.62
RAE1P78406 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.35□□□□□ -2.63
RAE1P78406 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.35□□□□□ -2.63
RAE1P78406 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.35□□□□□ -2.63
RAE1P78406 RNU6-822P-201ENST00000362707 106 ntBASIC-1.36□□□□□ -2.63
RAE1P78406 RNA5SP461-201ENST00000516451 104 ntBASIC-1.38□□□□□ -2.63
RAE1P78406 RNU6-59P-201ENST00000384787 107 ntBASIC-1.39□□□□□ -2.63
RAE1P78406 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.41□□□□□ -2.64
RAE1P78406 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.43□□□□□ -2.64
RAE1P78406 RNU6-226P-201ENST00000363778 107 ntBASIC-1.43□□□□□ -2.64
RAE1P78406 SNORD113-3-201ENST00000364830 72 ntBASIC-1.43□□□□□ -2.64
RAE1P78406 AC097484.2-201ENST00000509147 251 ntBASIC-1.44□□□□□ -2.64
RAE1P78406 AC108019.1-201ENST00000512540 175 ntBASIC-1.44□□□□□ -2.64
RAE1P78406 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.45□□□□□ -2.64
RAE1P78406 MIR1254-1-201ENST00000408257 97 ntBASIC-1.45□□□□□ -2.64
RAE1P78406 U4.2-201ENST00000618561 85 ntBASIC-1.45□□□□□ -2.64
RAE1P78406 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
RAE1P78406 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 RNA5SP180-201ENST00000516181 101 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 MIR4723-201ENST00000585070 81 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.46□□□□□ -2.64
RAE1P78406 FTX_4.1-201ENST00000616291 147 ntBASIC-1.47□□□□□ -2.64
RAE1P78406 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 RNU6-345P-201ENST00000517001 107 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.48□□□□□ -2.65
RAE1P78406 SNORD18.1-201ENST00000363807 70 ntBASIC-1.49□□□□□ -2.65
RAE1P78406 SNORD115.2-201ENST00000391126 59 ntBASIC-1.49□□□□□ -2.65
RAE1P78406 MIR365A-201ENST00000362260 87 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms