Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MIR581-201ENST00000384895 96 ntBASIC-1.01□□□□□ -2.57
LIMK2P53671 MIR3165-201ENST00000579874 75 ntBASIC-1.02□□□□□ -2.57
LIMK2P53671 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.03□□□□□ -2.57
LIMK2P53671 RNU6-695P-201ENST00000391157 104 ntBASIC-1.03□□□□□ -2.57
LIMK2P53671 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.03□□□□□ -2.57
LIMK2P53671 RNA5SP331-201ENST00000364986 107 ntBASIC-1.04□□□□□ -2.58
LIMK2P53671 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.04□□□□□ -2.58
LIMK2P53671 HLA-S-202ENST00000425174 53 ntBASIC-1.04□□□□□ -2.58
LIMK2P53671 MIR3123-201ENST00000583417 75 ntBASIC-1.04□□□□□ -2.58
LIMK2P53671 MIR4320-201ENST00000636981 65 ntBASIC-1.04□□□□□ -2.58
LIMK2P53671 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.05□□□□□ -2.58
LIMK2P53671 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.05□□□□□ -2.58
LIMK2P53671 RNU6-614P-201ENST00000384369 107 ntBASIC-1.05□□□□□ -2.58
LIMK2P53671 MIR4770-201ENST00000579149 58 ntBASIC-1.05□□□□□ -2.58
LIMK2P53671 U6.59-201ENST00000615686 107 ntBASIC-1.05□□□□□ -2.58
LIMK2P53671 SNORD18C-201ENST00000362704 69 ntBASIC-1.06□□□□□ -2.58
LIMK2P53671 RNU6-300P-201ENST00000459080 104 ntBASIC-1.06□□□□□ -2.58
LIMK2P53671 RNU6-936P-201ENST00000384005 107 ntBASIC-1.07□□□□□ -2.58
LIMK2P53671 RNA5SP266-201ENST00000410273 108 ntBASIC-1.09□□□□□ -2.58
LIMK2P53671 RNU6-176P-201ENST00000517196 105 ntBASIC-1.09□□□□□ -2.58
LIMK2P53671 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.1□□□□□ -2.59
LIMK2P53671 MIR548H1-201ENST00000408610 102 ntBASIC-1.1□□□□□ -2.59
LIMK2P53671 RNU6-68P-201ENST00000516576 104 ntBASIC-1.1□□□□□ -2.59
LIMK2P53671 MTND4LP19-201ENST00000403051 166 ntBASIC-1.11□□□□□ -2.59
LIMK2P53671 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.11□□□□□ -2.59
LIMK2P53671 RNU6-841P-201ENST00000383872 107 ntBASIC-1.12□□□□□ -2.59
LIMK2P53671 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.12□□□□□ -2.59
LIMK2P53671 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
LIMK2P53671 MIR548AL-201ENST00000578416 97 ntBASIC-1.12□□□□□ -2.59
LIMK2P53671 MIR548W-201ENST00000581970 74 ntBASIC-1.12□□□□□ -2.59
LIMK2P53671 RNU6-753P-201ENST00000363926 107 ntBASIC-1.13□□□□□ -2.59
LIMK2P53671 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.13□□□□□ -2.59
LIMK2P53671 MIR548AM-201ENST00000584298 74 ntBASIC-1.13□□□□□ -2.59
LIMK2P53671 RNU6-808P-201ENST00000391233 108 ntBASIC-1.14□□□□□ -2.59
LIMK2P53671 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.14□□□□□ -2.59
LIMK2P53671 RNU6-838P-201ENST00000363399 108 ntBASIC-1.15□□□□□ -2.59
LIMK2P53671 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.15□□□□□ -2.59
LIMK2P53671 snoU13.10-201ENST00000459301 103 ntBASIC-1.15□□□□□ -2.59
LIMK2P53671 AC108019.1-201ENST00000512540 175 ntBASIC-1.15□□□□□ -2.59
LIMK2P53671 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.16□□□□□ -2.6
LIMK2P53671 MIR379-201ENST00000362218 67 ntBASIC-1.17□□□□□ -2.6
LIMK2P53671 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.17□□□□□ -2.6
LIMK2P53671 MIR4756-201ENST00000577874 78 ntBASIC-1.17□□□□□ -2.6
LIMK2P53671 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.17□□□□□ -2.6
LIMK2P53671 MIR548H4-201ENST00000408689 111 ntBASIC-1.18□□□□□ -2.6
LIMK2P53671 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.18□□□□□ -2.6
LIMK2P53671 SNORD18.1-201ENST00000363807 70 ntBASIC-1.19□□□□□ -2.6
LIMK2P53671 RNU4-88P-201ENST00000411220 86 ntBASIC-1.2□□□□□ -2.6
LIMK2P53671 RNA5SP180-201ENST00000516181 101 ntBASIC-1.2□□□□□ -2.6
LIMK2P53671 MIR4317-201ENST00000637586 65 ntBASIC-1.2□□□□□ -2.6
LIMK2P53671 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.21□□□□□ -2.6
LIMK2P53671 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.21□□□□□ -2.6
LIMK2P53671 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.21□□□□□ -2.6
LIMK2P53671 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.22□□□□□ -2.6
LIMK2P53671 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.22□□□□□ -2.6
LIMK2P53671 RNU6-930P-201ENST00000390938 100 ntBASIC-1.22□□□□□ -2.6
LIMK2P53671 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.23□□□□□ -2.61
LIMK2P53671 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.23□□□□□ -2.61
LIMK2P53671 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.24□□□□□ -2.61
LIMK2P53671 MIR548F3-201ENST00000408509 87 ntBASIC-1.24□□□□□ -2.61
LIMK2P53671 MIR664B-201ENST00000626756 61 ntBASIC-1.24□□□□□ -2.61
LIMK2P53671 RNU6-912P-201ENST00000363800 104 ntBASIC-1.25□□□□□ -2.61
LIMK2P53671 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.26□□□□□ -2.61
LIMK2P53671 MIR601-201ENST00000385256 79 ntBASIC-1.26□□□□□ -2.61
LIMK2P53671 SNX3P1X-201ENST00000414887 175 ntBASIC-1.26□□□□□ -2.61
LIMK2P53671 SNORD113-3-201ENST00000364830 72 ntBASIC-1.27□□□□□ -2.61
LIMK2P53671 MIR1285-2-201ENST00000408311 88 ntBASIC-1.27□□□□□ -2.61
LIMK2P53671 MIR198-201ENST00000637333 62 ntBASIC-1.27□□□□□ -2.61
LIMK2P53671 RNU6-983P-201ENST00000516004 103 ntBASIC-1.28□□□□□ -2.61
LIMK2P53671 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.29□□□□□ -2.62
LIMK2P53671 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.29□□□□□ -2.62
LIMK2P53671 MIR1246-201ENST00000636535 73 ntBASIC-1.29□□□□□ -2.62
LIMK2P53671 RNU6-986P-201ENST00000363133 102 ntBASIC-1.3□□□□□ -2.62
LIMK2P53671 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.3□□□□□ -2.62
LIMK2P53671 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.3□□□□□ -2.62
LIMK2P53671 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.31□□□□□ -2.62
LIMK2P53671 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.31□□□□□ -2.62
LIMK2P53671 RNU6-141P-201ENST00000410499 105 ntBASIC-1.31□□□□□ -2.62
LIMK2P53671 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.31□□□□□ -2.62
LIMK2P53671 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.31□□□□□ -2.62
LIMK2P53671 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.32□□□□□ -2.62
LIMK2P53671 RNU6-987P-201ENST00000384759 104 ntBASIC-1.32□□□□□ -2.62
LIMK2P53671 RNU4-37P-201ENST00000410214 84 ntBASIC-1.32□□□□□ -2.62
LIMK2P53671 AC097484.2-201ENST00000509147 251 ntBASIC-1.32□□□□□ -2.62
LIMK2P53671 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.32□□□□□ -2.62
LIMK2P53671 MIR365A-201ENST00000362260 87 ntBASIC-1.33□□□□□ -2.62
LIMK2P53671 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.33□□□□□ -2.62
LIMK2P53671 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
LIMK2P53671 RNU6-822P-201ENST00000362707 106 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.34□□□□□ -2.62
LIMK2P53671 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.35□□□□□ -2.63
LIMK2P53671 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 299.5 ms