Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 RNA5SP266-201ENST00000410273 108 ntBASIC-1.54□□□□□ -2.66
VPS41P49754 RNU6-614P-201ENST00000384369 107 ntBASIC-1.57□□□□□ -2.66
VPS41P49754 RNU6-300P-201ENST00000459080 104 ntBASIC-1.57□□□□□ -2.66
VPS41P49754 U6.59-201ENST00000615686 107 ntBASIC-1.57□□□□□ -2.66
VPS41P49754 RNU6-176P-201ENST00000517196 105 ntBASIC-1.58□□□□□ -2.66
VPS41P49754 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.59□□□□□ -2.66
VPS41P49754 MIR4520-1-201ENST00000582609 70 ntBASIC-1.59□□□□□ -2.66
VPS41P49754 RNU6-936P-201ENST00000384005 107 ntBASIC-1.6□□□□□ -2.67
VPS41P49754 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.61□□□□□ -2.67
VPS41P49754 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.61□□□□□ -2.67
VPS41P49754 HLA-S-202ENST00000425174 53 ntBASIC-1.61□□□□□ -2.67
VPS41P49754 MIR3123-201ENST00000583417 75 ntBASIC-1.61□□□□□ -2.67
VPS41P49754 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.62□□□□□ -2.67
VPS41P49754 MIR5591-201ENST00000578248 65 ntBASIC-1.62□□□□□ -2.67
VPS41P49754 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.62□□□□□ -2.67
VPS41P49754 MIR548AL-201ENST00000578416 97 ntBASIC-1.63□□□□□ -2.67
VPS41P49754 RNU6-68P-201ENST00000516576 104 ntBASIC-1.64□□□□□ -2.67
VPS41P49754 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.65□□□□□ -2.67
VPS41P49754 RNA5SP331-201ENST00000364986 107 ntBASIC-1.66□□□□□ -2.68
VPS41P49754 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.66□□□□□ -2.68
VPS41P49754 MIR4770-201ENST00000579149 58 ntBASIC-1.66□□□□□ -2.68
VPS41P49754 MTND4LP19-201ENST00000403051 166 ntBASIC-1.67□□□□□ -2.68
VPS41P49754 RNU6-838P-201ENST00000363399 108 ntBASIC-1.68□□□□□ -2.68
VPS41P49754 RNU6-753P-201ENST00000363926 107 ntBASIC-1.68□□□□□ -2.68
VPS41P49754 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.68□□□□□ -2.68
VPS41P49754 RNA5SP461-201ENST00000516451 104 ntBASIC-1.68□□□□□ -2.68
VPS41P49754 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.68□□□□□ -2.68
VPS41P49754 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.69□□□□□ -2.68
VPS41P49754 RNA5SP86-201ENST00000390869 98 ntBASIC-1.69□□□□□ -2.68
VPS41P49754 MIR379-201ENST00000362218 67 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 RNU6-841P-201ENST00000383872 107 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 RNU6-808P-201ENST00000391233 108 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 AL627230.5-201ENST00000619807 58 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.7□□□□□ -2.68
VPS41P49754 MIR548H4-201ENST00000408689 111 ntBASIC-1.72□□□□□ -2.68
VPS41P49754 MIR198-201ENST00000637333 62 ntBASIC-1.72□□□□□ -2.68
VPS41P49754 SNX3P1X-201ENST00000414887 175 ntBASIC-1.73□□□□□ -2.69
VPS41P49754 RNA5SP180-201ENST00000516181 101 ntBASIC-1.75□□□□□ -2.69
VPS41P49754 RNU6-226P-201ENST00000363778 107 ntBASIC-1.76□□□□□ -2.69
VPS41P49754 MIR548H1-201ENST00000408610 102 ntBASIC-1.77□□□□□ -2.69
VPS41P49754 MIR548AM-201ENST00000584298 74 ntBASIC-1.77□□□□□ -2.69
VPS41P49754 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.78□□□□□ -2.69
VPS41P49754 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.79□□□□□ -2.7
VPS41P49754 MIR487B-201ENST00000385021 84 ntBASIC-1.79□□□□□ -2.7
VPS41P49754 MIR548W-201ENST00000581970 74 ntBASIC-1.79□□□□□ -2.7
VPS41P49754 MIR4317-201ENST00000637586 65 ntBASIC-1.79□□□□□ -2.7
VPS41P49754 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.8□□□□□ -2.7
VPS41P49754 MIR601-201ENST00000385256 79 ntBASIC-1.8□□□□□ -2.7
VPS41P49754 snoU13.10-201ENST00000459301 103 ntBASIC-1.8□□□□□ -2.7
VPS41P49754 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.81□□□□□ -2.7
VPS41P49754 RNU6-930P-201ENST00000390938 100 ntBASIC-1.81□□□□□ -2.7
VPS41P49754 MIR548F3-201ENST00000408509 87 ntBASIC-1.81□□□□□ -2.7
VPS41P49754 RNU6-912P-201ENST00000363800 104 ntBASIC-1.83□□□□□ -2.7
VPS41P49754 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.83□□□□□ -2.7
VPS41P49754 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.85□□□□□ -2.71
VPS41P49754 RNU4-88P-201ENST00000411220 86 ntBASIC-1.85□□□□□ -2.71
VPS41P49754 MIR1285-2-201ENST00000408311 88 ntBASIC-1.86□□□□□ -2.71
VPS41P49754 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.9□□□□□ -2.71
VPS41P49754 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.9□□□□□ -2.71
VPS41P49754 MIR1246-201ENST00000636535 73 ntBASIC-1.9□□□□□ -2.71
VPS41P49754 MIR365A-201ENST00000362260 87 ntBASIC-1.91□□□□□ -2.72
VPS41P49754 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.91□□□□□ -2.72
VPS41P49754 MIR4441-201ENST00000582623 100 ntBASIC-1.91□□□□□ -2.72
VPS41P49754 RNU6-986P-201ENST00000363133 102 ntBASIC-1.92□□□□□ -2.72
VPS41P49754 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.93□□□□□ -2.72
VPS41P49754 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.93□□□□□ -2.72
VPS41P49754 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.94□□□□□ -2.72
VPS41P49754 RNU6-987P-201ENST00000384759 104 ntBASIC-1.94□□□□□ -2.72
VPS41P49754 RNU4-37P-201ENST00000410214 84 ntBASIC-1.94□□□□□ -2.72
VPS41P49754 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.94□□□□□ -2.72
VPS41P49754 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.95□□□□□ -2.72
VPS41P49754 SNORD18.1-201ENST00000363807 70 ntBASIC-1.96□□□□□ -2.72
VPS41P49754 RNU6-141P-201ENST00000410499 105 ntBASIC-1.96□□□□□ -2.72
VPS41P49754 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.97□□□□□ -2.72
VPS41P49754 AC108019.1-201ENST00000512540 175 ntBASIC-1.97□□□□□ -2.72
VPS41P49754 RNU6-822P-201ENST00000362707 106 ntBASIC-1.99□□□□□ -2.73
VPS41P49754 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.99□□□□□ -2.73
VPS41P49754 AC097484.2-201ENST00000509147 251 ntBASIC-1.99□□□□□ -2.73
VPS41P49754 SNORD113-3-201ENST00000364830 72 ntBASIC-2□□□□□ -2.73
VPS41P49754 Y_RNA.413-201ENST00000384007 102 ntBASIC-2□□□□□ -2.73
VPS41P49754 RNU6-59P-201ENST00000384787 107 ntBASIC-2□□□□□ -2.73
VPS41P49754 Y_RNA.754-201ENST00000476024 102 ntBASIC-2□□□□□ -2.73
VPS41P49754 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2□□□□□ -2.73
VPS41P49754 Y_RNA.790-201ENST00000614282 102 ntBASIC-2□□□□□ -2.73
VPS41P49754 Y_RNA.782-201ENST00000614695 102 ntBASIC-2□□□□□ -2.73
VPS41P49754 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.01□□□□□ -2.73
VPS41P49754 MIR545-201ENST00000385085 106 ntBASIC-2.01□□□□□ -2.73
VPS41P49754 U4.2-201ENST00000618561 85 ntBASIC-2.02□□□□□ -2.73
VPS41P49754 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.04□□□□□ -2.74
VPS41P49754 RNU6-983P-201ENST00000516004 103 ntBASIC-2.04□□□□□ -2.74
VPS41P49754 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 MIR4756-201ENST00000577874 78 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.05□□□□□ -2.74
VPS41P49754 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms