Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR4760-201ENST00000585040 80 ntBASIC-6.97□□□□□ -3.52
VCANP13611 Y_RNA.252-201ENST00000364556 101 ntBASIC-6.98□□□□□ -3.53
VCANP13611 MTND5P20-201ENST00000448677 143 ntBASIC-6.98□□□□□ -3.53
VCANP13611 Y_RNA.712-201ENST00000517011 92 ntBASIC-6.98□□□□□ -3.53
VCANP13611 MIR3611-201ENST00000584484 83 ntBASIC-6.99□□□□□ -3.53
VCANP13611 Y_RNA.20-201ENST00000362479 113 ntBASIC-6.99□□□□□ -3.53
VCANP13611 RNU4-14P-201ENST00000410858 122 ntBASIC-6.99□□□□□ -3.53
VCANP13611 AP003461.1-201ENST00000528866 78 ntBASIC-6.99□□□□□ -3.53
VCANP13611 Y_RNA.58-201ENST00000362807 102 ntBASIC-7.01□□□□□ -3.53
VCANP13611 Y_RNA.276-201ENST00000364732 109 ntBASIC-7.01□□□□□ -3.53
VCANP13611 RNU6-1135P-201ENST00000411083 103 ntBASIC-7.01□□□□□ -3.53
VCANP13611 MTND4P17-201ENST00000470444 350 ntBASIC-7.02□□□□□ -3.53
VCANP13611 RNU6-483P-201ENST00000384088 108 ntBASIC-7.02□□□□□ -3.53
VCANP13611 AL031737.1-201ENST00000450125 223 ntBASIC-7.03□□□□□ -3.53
VCANP13611 SNORD116-4-201ENST00000384733 96 ntBASIC-7.06□□□□□ -3.54
VCANP13611 MTND4LP9-201ENST00000427694 174 ntBASIC-7.07□□□□□ -3.54
VCANP13611 RNU6-780P-201ENST00000391030 104 ntBASIC-7.08□□□□□ -3.54
VCANP13611 Y_RNA.210-201ENST00000364161 110 ntBASIC-7.11□□□□□ -3.55
VCANP13611 Y_RNA.89-201ENST00000363031 102 ntBASIC-7.11□□□□□ -3.55
VCANP13611 RNU7-30P-201ENST00000516835 62 ntBASIC-7.11□□□□□ -3.55
VCANP13611 SNORD116-18-201ENST00000383961 92 ntBASIC-7.15□□□□□ -3.55
VCANP13611 SNORD116-29-201ENST00000384516 83 ntBASIC-7.16□□□□□ -3.55
VCANP13611 AC141273.2-201ENST00000618989 130 ntBASIC-7.16□□□□□ -3.55
VCANP13611 SNORA40-201ENST00000388090 126 ntBASIC-7.16□□□□□ -3.56
VCANP13611 Y_RNA.580-201ENST00000391004 95 ntBASIC-7.17□□□□□ -3.56
VCANP13611 AC113139.1-201ENST00000605049 239 ntBASIC-7.17□□□□□ -3.56
VCANP13611 MIR488-201ENST00000365739 83 ntBASIC-7.17□□□□□ -3.56
VCANP13611 RNU6-232P-201ENST00000517144 64 ntBASIC-7.17□□□□□ -3.56
VCANP13611 Y_RNA.70-201ENST00000362886 110 ntBASIC-7.18□□□□□ -3.56
VCANP13611 RNU6-426P-201ENST00000516464 97 ntBASIC-7.18□□□□□ -3.56
VCANP13611 RNU6-1020P-201ENST00000363684 107 ntBASIC-7.19□□□□□ -3.56
VCANP13611 Y_RNA.662-201ENST00000516028 97 ntBASIC-7.19□□□□□ -3.56
VCANP13611 AC022559.1-201ENST00000520905 205 ntBASIC-7.19□□□□□ -3.56
VCANP13611 AF246928.1-201ENST00000623768 87 ntBASIC-7.19□□□□□ -3.56
VCANP13611 Y_RNA.259-201ENST00000364619 101 ntBASIC-7.2□□□□□ -3.56
VCANP13611 Y_RNA.356-201ENST00000365475 113 ntBASIC-7.2□□□□□ -3.56
VCANP13611 RNU6-1131P-201ENST00000364955 107 ntBASIC-7.21□□□□□ -3.56
VCANP13611 RN7SKP298-201ENST00000515950 94 ntBASIC-7.23□□□□□ -3.57
VCANP13611 SNORA33.2-201ENST00000365413 134 ntBASIC-7.25□□□□□ -3.57
VCANP13611 AC008267.6-201ENST00000441664 139 ntBASIC-7.25□□□□□ -3.57
VCANP13611 MIR3915-201ENST00000578518 97 ntBASIC-7.26□□□□□ -3.57
VCANP13611 RNU6-906P-201ENST00000384700 70 ntBASIC-7.27□□□□□ -3.57
VCANP13611 MIR569-201ENST00000385228 96 ntBASIC-7.29□□□□□ -3.58
VCANP13611 SNORD113-6-201ENST00000363345 75 ntBASIC-7.31□□□□□ -3.58
VCANP13611 RNU7-152P-201ENST00000458982 64 ntBASIC-7.32□□□□□ -3.58
VCANP13611 RNU6-394P-201ENST00000410735 107 ntBASIC-7.34□□□□□ -3.59
VCANP13611 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-7.35□□□□□ -3.59
VCANP13611 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-7.36□□□□□ -3.59
VCANP13611 MIR450A1-201ENST00000362262 91 ntBASIC-7.37□□□□□ -3.59
VCANP13611 RNU6-640P-201ENST00000363693 105 ntBASIC-7.37□□□□□ -3.59
VCANP13611 MIR548F1-201ENST00000408667 84 ntBASIC-7.37□□□□□ -3.59
VCANP13611 RNU6-49P-201ENST00000384256 107 ntBASIC-7.38□□□□□ -3.59
VCANP13611 RNU6-857P-201ENST00000515893 110 ntBASIC-7.38□□□□□ -3.59
VCANP13611 MIR4680-201ENST00000580906 66 ntBASIC-7.39□□□□□ -3.59
VCANP13611 Y_RNA.200-201ENST00000364018 102 ntBASIC-7.39□□□□□ -3.59
VCANP13611 AC113195.1-201ENST00000579952 141 ntBASIC-7.39□□□□□ -3.59
VCANP13611 RNU6-820P-201ENST00000384273 107 ntBASIC-7.4□□□□□ -3.59
VCANP13611 Y_RNA.343-201ENST00000365354 112 ntBASIC-7.42□□□□□ -3.6
VCANP13611 MIR1302-3-201ENST00000408128 138 ntBASIC-7.45□□□□□ -3.6
VCANP13611 RNU6-713P-201ENST00000384761 107 ntBASIC-7.46□□□□□ -3.6
VCANP13611 RNU7-125P-201ENST00000458760 62 ntBASIC-7.46□□□□□ -3.6
VCANP13611 MIR1255A-201ENST00000408338 113 ntBASIC-7.47□□□□□ -3.61
VCANP13611 AC125388.1-201ENST00000459631 156 ntBASIC-7.48□□□□□ -3.61
VCANP13611 RNU6-589P-201ENST00000516485 107 ntBASIC-7.48□□□□□ -3.61
VCANP13611 RNU6-257P-201ENST00000410238 98 ntBASIC-7.49□□□□□ -3.61
VCANP13611 MIR4662A-201ENST00000637499 67 ntBASIC-7.49□□□□□ -3.61
VCANP13611 RNU6-279P-201ENST00000391297 101 ntBASIC-7.52□□□□□ -3.61
VCANP13611 Y_RNA.573-201ENST00000384763 105 ntBASIC-7.53□□□□□ -3.61
VCANP13611 RNU6-406P-201ENST00000516470 107 ntBASIC-7.54□□□□□ -3.62
VCANP13611 Y_RNA.431-201ENST00000384086 102 ntBASIC-7.54□□□□□ -3.62
VCANP13611 Y_RNA.197-201ENST00000364004 102 ntBASIC-7.55□□□□□ -3.62
VCANP13611 RNU6-804P-201ENST00000384286 107 ntBASIC-7.56□□□□□ -3.62
VCANP13611 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-7.57□□□□□ -3.62
VCANP13611 RNU6-32P-201ENST00000383948 107 ntBASIC-7.57□□□□□ -3.62
VCANP13611 RNU6-13P-201ENST00000384248 107 ntBASIC-7.57□□□□□ -3.62
VCANP13611 RNU6-12P-201ENST00000384604 107 ntBASIC-7.57□□□□□ -3.62
VCANP13611 RNU6-41P-201ENST00000384741 107 ntBASIC-7.57□□□□□ -3.62
VCANP13611 RNY4P14-201ENST00000363656 96 ntBASIC-7.58□□□□□ -3.62
VCANP13611 MIR450A2-201ENST00000385022 100 ntBASIC-7.59□□□□□ -3.62
VCANP13611 MIR3202-2-201ENST00000635980 79 ntBASIC-7.59□□□□□ -3.62
VCANP13611 DEFB108C-201ENST00000400154 252 ntBASIC-7.63□□□□□ -3.63
VCANP13611 RNU6-1056P-201ENST00000383996 107 ntBASIC-7.63□□□□□ -3.63
VCANP13611 MIR4509-3-201ENST00000578671 94 ntBASIC-7.64□□□□□ -3.63
VCANP13611 MIR4509-2-201ENST00000583920 94 ntBASIC-7.64□□□□□ -3.63
VCANP13611 MIR4509-1-201ENST00000618224 94 ntBASIC-7.64□□□□□ -3.63
VCANP13611 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-7.64□□□□□ -3.63
VCANP13611 RNU6-277P-201ENST00000516272 106 ntBASIC-7.65□□□□□ -3.63
VCANP13611 SNORD116-14-201ENST00000383894 92 ntBASIC-7.68□□□□□ -3.64
VCANP13611 SNORD116-17-201ENST00000383929 92 ntBASIC-7.68□□□□□ -3.64
VCANP13611 SNORD116-15-201ENST00000384445 92 ntBASIC-7.68□□□□□ -3.64
VCANP13611 SNORD116-19-201ENST00000384729 92 ntBASIC-7.68□□□□□ -3.64
VCANP13611 RNU6-327P-201ENST00000516270 127 ntBASIC-7.68□□□□□ -3.64
VCANP13611 Y_RNA.81-201ENST00000362997 102 ntBASIC-7.7□□□□□ -3.64
VCANP13611 MTND5P41-201ENST00000517498 206 ntBASIC-7.7□□□□□ -3.64
VCANP13611 RNU6-200P-201ENST00000364743 107 ntBASIC-7.71□□□□□ -3.64
VCANP13611 RNU5A-2P-201ENST00000384337 116 ntBASIC-7.72□□□□□ -3.64
VCANP13611 MTND4LP19-201ENST00000403051 166 ntBASIC-7.72□□□□□ -3.65
VCANP13611 RNY4P30-201ENST00000410216 95 ntBASIC-7.73□□□□□ -3.65
VCANP13611 Y_RNA.422-201ENST00000384054 114 ntBASIC-7.74□□□□□ -3.65
VCANP13611 MTND4P29-201ENST00000503122 1372 ntBASIC-7.75□□□□□ -3.65
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms