Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-400P-201ENST00000391173 106 ntBASIC-1.32□□□□□ -2.62
SNRPA1P09661 RNU6-838P-201ENST00000363399 108 ntBASIC-1.33□□□□□ -2.62
SNRPA1P09661 MIR378F-201ENST00000578143 78 ntBASIC-1.33□□□□□ -2.62
SNRPA1P09661 MIR6738-201ENST00000619620 64 ntBASIC-1.33□□□□□ -2.62
SNRPA1P09661 RNU6-141P-201ENST00000410499 105 ntBASIC-1.34□□□□□ -2.62
SNRPA1P09661 RNU4-88P-201ENST00000411220 86 ntBASIC-1.34□□□□□ -2.62
SNRPA1P09661 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.35□□□□□ -2.63
SNRPA1P09661 RNU6-930P-201ENST00000390938 100 ntBASIC-1.37□□□□□ -2.63
SNRPA1P09661 RNU6-176P-201ENST00000517196 105 ntBASIC-1.37□□□□□ -2.63
SNRPA1P09661 SNORD18C-201ENST00000362704 69 ntBASIC-1.38□□□□□ -2.63
SNRPA1P09661 RNU6-10P-201ENST00000384036 107 ntBASIC-1.38□□□□□ -2.63
SNRPA1P09661 MIR4324-201ENST00000584846 72 ntBASIC-1.38□□□□□ -2.63
SNRPA1P09661 SNX3P1X-201ENST00000414887 175 ntBASIC-1.41□□□□□ -2.64
SNRPA1P09661 MIR4320-201ENST00000636981 65 ntBASIC-1.41□□□□□ -2.64
SNRPA1P09661 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.43□□□□□ -2.64
SNRPA1P09661 RNU6-695P-201ENST00000391157 104 ntBASIC-1.43□□□□□ -2.64
SNRPA1P09661 MIR6502-201ENST00000617296 76 ntBASIC-1.43□□□□□ -2.64
SNRPA1P09661 MIR548F3-201ENST00000408509 87 ntBASIC-1.44□□□□□ -2.64
SNRPA1P09661 MIR4306-201ENST00000583390 91 ntBASIC-1.44□□□□□ -2.64
SNRPA1P09661 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.44□□□□□ -2.64
SNRPA1P09661 MIR4317-201ENST00000637586 65 ntBASIC-1.44□□□□□ -2.64
SNRPA1P09661 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.45□□□□□ -2.64
SNRPA1P09661 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.47□□□□□ -2.64
SNRPA1P09661 MIR548H4-201ENST00000408689 111 ntBASIC-1.47□□□□□ -2.64
SNRPA1P09661 MIR198-201ENST00000637333 62 ntBASIC-1.47□□□□□ -2.64
SNRPA1P09661 MIR4520-1-201ENST00000582609 70 ntBASIC-1.48□□□□□ -2.65
SNRPA1P09661 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.49□□□□□ -2.65
SNRPA1P09661 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.49□□□□□ -2.65
SNRPA1P09661 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.49□□□□□ -2.65
SNRPA1P09661 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.5□□□□□ -2.65
SNRPA1P09661 RNU6-986P-201ENST00000363133 102 ntBASIC-1.51□□□□□ -2.65
SNRPA1P09661 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.51□□□□□ -2.65
SNRPA1P09661 RNU6-68P-201ENST00000516576 104 ntBASIC-1.51□□□□□ -2.65
SNRPA1P09661 MIR3123-201ENST00000583417 75 ntBASIC-1.51□□□□□ -2.65
SNRPA1P09661 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.53□□□□□ -2.65
SNRPA1P09661 MIR379-201ENST00000362218 67 ntBASIC-1.54□□□□□ -2.66
SNRPA1P09661 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.54□□□□□ -2.66
SNRPA1P09661 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.54□□□□□ -2.66
SNRPA1P09661 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.55□□□□□ -2.66
SNRPA1P09661 MIR3165-201ENST00000579874 75 ntBASIC-1.55□□□□□ -2.66
SNRPA1P09661 MIR545-201ENST00000385085 106 ntBASIC-1.56□□□□□ -2.66
SNRPA1P09661 MIR601-201ENST00000385256 79 ntBASIC-1.56□□□□□ -2.66
SNRPA1P09661 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.58□□□□□ -2.66
SNRPA1P09661 RNU6-706P-201ENST00000517229 104 ntBASIC-1.58□□□□□ -2.66
SNRPA1P09661 MIR3115-201ENST00000577915 68 ntBASIC-1.58□□□□□ -2.66
SNRPA1P09661 AC138207.3-201ENST00000585289 166 ntBASIC-1.58□□□□□ -2.66
SNRPA1P09661 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.59□□□□□ -2.66
SNRPA1P09661 RNU6-822P-201ENST00000362707 106 ntBASIC-1.61□□□□□ -2.67
SNRPA1P09661 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.61□□□□□ -2.67
SNRPA1P09661 RNU6-912P-201ENST00000363800 104 ntBASIC-1.61□□□□□ -2.67
SNRPA1P09661 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.61□□□□□ -2.67
SNRPA1P09661 MIR548H1-201ENST00000408610 102 ntBASIC-1.63□□□□□ -2.67
SNRPA1P09661 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.64□□□□□ -2.67
SNRPA1P09661 RNU6-841P-201ENST00000383872 107 ntBASIC-1.64□□□□□ -2.67
SNRPA1P09661 MIR5591-201ENST00000578248 65 ntBASIC-1.65□□□□□ -2.67
SNRPA1P09661 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.66□□□□□ -2.68
SNRPA1P09661 snoU13.10-201ENST00000459301 103 ntBASIC-1.66□□□□□ -2.68
SNRPA1P09661 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.67□□□□□ -2.68
SNRPA1P09661 MIR548W-201ENST00000581970 74 ntBASIC-1.68□□□□□ -2.68
SNRPA1P09661 RNA5SP86-201ENST00000390869 98 ntBASIC-1.69□□□□□ -2.68
SNRPA1P09661 HLA-S-202ENST00000425174 53 ntBASIC-1.69□□□□□ -2.68
SNRPA1P09661 MIR4770-201ENST00000579149 58 ntBASIC-1.69□□□□□ -2.68
SNRPA1P09661 MIR548AM-201ENST00000584298 74 ntBASIC-1.69□□□□□ -2.68
SNRPA1P09661 MIR487B-201ENST00000385021 84 ntBASIC-1.7□□□□□ -2.68
SNRPA1P09661 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.71□□□□□ -2.68
SNRPA1P09661 RNU6-59P-201ENST00000384787 107 ntBASIC-1.71□□□□□ -2.68
SNRPA1P09661 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.73□□□□□ -2.69
SNRPA1P09661 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.73□□□□□ -2.69
SNRPA1P09661 MIR4723-201ENST00000585070 81 ntBASIC-1.75□□□□□ -2.69
SNRPA1P09661 RNA5SP180-201ENST00000516181 101 ntBASIC-1.76□□□□□ -2.69
SNRPA1P09661 SNORD115.2-201ENST00000391126 59 ntBASIC-1.77□□□□□ -2.69
SNRPA1P09661 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.77□□□□□ -2.69
SNRPA1P09661 RNA5SP461-201ENST00000516451 104 ntBASIC-1.79□□□□□ -2.7
SNRPA1P09661 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.8□□□□□ -2.7
SNRPA1P09661 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.8□□□□□ -2.7
SNRPA1P09661 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.8□□□□□ -2.7
SNRPA1P09661 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.8□□□□□ -2.7
SNRPA1P09661 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.8□□□□□ -2.7
SNRPA1P09661 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.8□□□□□ -2.7
SNRPA1P09661 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.82□□□□□ -2.7
SNRPA1P09661 MIR1254-1-201ENST00000408257 97 ntBASIC-1.82□□□□□ -2.7
SNRPA1P09661 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.83□□□□□ -2.7
SNRPA1P09661 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.84□□□□□ -2.7
SNRPA1P09661 SNORD113-3-201ENST00000364830 72 ntBASIC-1.84□□□□□ -2.7
SNRPA1P09661 FTX_4.1-201ENST00000616291 147 ntBASIC-1.84□□□□□ -2.7
SNRPA1P09661 U4.2-201ENST00000618561 85 ntBASIC-1.85□□□□□ -2.71
SNRPA1P09661 MIR365A-201ENST00000362260 87 ntBASIC-1.86□□□□□ -2.71
SNRPA1P09661 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.87□□□□□ -2.71
SNRPA1P09661 AC097484.2-201ENST00000509147 251 ntBASIC-1.88□□□□□ -2.71
SNRPA1P09661 SNORD114-3-201ENST00000364969 75 ntBASIC-1.9□□□□□ -2.71
SNRPA1P09661 MIR1285-2-201ENST00000408311 88 ntBASIC-1.9□□□□□ -2.71
SNRPA1P09661 RNU6-345P-201ENST00000517001 107 ntBASIC-1.9□□□□□ -2.71
SNRPA1P09661 MIR4441-201ENST00000582623 100 ntBASIC-1.9□□□□□ -2.71
SNRPA1P09661 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.91□□□□□ -2.72
SNRPA1P09661 RNU6-836P-201ENST00000362920 107 ntBASIC-1.92□□□□□ -2.72
SNRPA1P09661 RNU6-226P-201ENST00000363778 107 ntBASIC-1.92□□□□□ -2.72
SNRPA1P09661 RNA5SP224-201ENST00000365069 126 ntBASIC-1.92□□□□□ -2.72
SNRPA1P09661 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.93□□□□□ -2.72
SNRPA1P09661 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.93□□□□□ -2.72
SNRPA1P09661 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms