Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.82□□□□□ -2.7
CD74P04233 RNU6-820P-201ENST00000384273 107 ntBASIC-1.82□□□□□ -2.7
CD74P04233 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
CD74P04233 AC097484.2-201ENST00000509147 251 ntBASIC-1.82□□□□□ -2.7
CD74P04233 RNU6-828P-201ENST00000364876 107 ntBASIC-1.83□□□□□ -2.7
CD74P04233 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.83□□□□□ -2.7
CD74P04233 RNU6-663P-201ENST00000391105 106 ntBASIC-1.83□□□□□ -2.7
CD74P04233 SNORA17.4-201ENST00000391287 132 ntBASIC-1.83□□□□□ -2.7
CD74P04233 MIR4748-201ENST00000578076 82 ntBASIC-1.83□□□□□ -2.7
CD74P04233 SNORD60-201ENST00000383903 83 ntBASIC-1.84□□□□□ -2.7
CD74P04233 SNORA40.16-201ENST00000517238 121 ntBASIC-1.84□□□□□ -2.7
CD74P04233 AC062037.1-201ENST00000605302 128 ntBASIC-1.84□□□□□ -2.7
CD74P04233 RNU6-912P-201ENST00000363800 104 ntBASIC-1.85□□□□□ -2.71
CD74P04233 RNU6-361P-201ENST00000364454 107 ntBASIC-1.85□□□□□ -2.71
CD74P04233 RNU6-530P-201ENST00000391180 107 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 FTX_4.1-201ENST00000616291 147 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.85□□□□□ -2.71
CD74P04233 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.86□□□□□ -2.71
CD74P04233 RNU6-634P-201ENST00000459134 106 ntBASIC-1.86□□□□□ -2.71
CD74P04233 SNORA40B-201ENST00000385573 128 ntBASIC-1.87□□□□□ -2.71
CD74P04233 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.88□□□□□ -2.71
CD74P04233 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.88□□□□□ -2.71
CD74P04233 SNORD30.1-201ENST00000391309 70 ntBASIC-1.89□□□□□ -2.71
CD74P04233 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.89□□□□□ -2.71
CD74P04233 RNU6-141P-201ENST00000410499 105 ntBASIC-1.89□□□□□ -2.71
CD74P04233 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.89□□□□□ -2.71
CD74P04233 SNORA25.5-201ENST00000363782 126 ntBASIC-1.9□□□□□ -2.71
CD74P04233 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.9□□□□□ -2.71
CD74P04233 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.9□□□□□ -2.71
CD74P04233 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.9□□□□□ -2.71
CD74P04233 MIR4426-201ENST00000640330 63 ntBASIC-1.91□□□□□ -2.72
CD74P04233 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.92□□□□□ -2.72
CD74P04233 SNORA25.4-201ENST00000363666 124 ntBASIC-1.92□□□□□ -2.72
CD74P04233 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.93□□□□□ -2.72
CD74P04233 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
CD74P04233 RNU6-122P-201ENST00000516818 107 ntBASIC-1.93□□□□□ -2.72
CD74P04233 RNU6-742P-201ENST00000365289 107 ntBASIC-1.94□□□□□ -2.72
CD74P04233 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.94□□□□□ -2.72
CD74P04233 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.94□□□□□ -2.72
CD74P04233 RNY4P7-201ENST00000364600 96 ntBASIC-1.95□□□□□ -2.72
CD74P04233 AL451105.1-201ENST00000450005 189 ntBASIC-1.95□□□□□ -2.72
CD74P04233 MIR1254-1-201ENST00000408257 97 ntBASIC-1.96□□□□□ -2.72
CD74P04233 MIR3202-2-201ENST00000635980 79 ntBASIC-1.96□□□□□ -2.72
CD74P04233 RNU6-590P-201ENST00000365039 107 ntBASIC-1.97□□□□□ -2.72
CD74P04233 RNU6-573P-201ENST00000383938 106 ntBASIC-1.97□□□□□ -2.72
CD74P04233 RNU6-871P-201ENST00000516122 100 ntBASIC-1.97□□□□□ -2.72
CD74P04233 RNA5SP93-201ENST00000362525 114 ntBASIC-1.98□□□□□ -2.73
CD74P04233 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.98□□□□□ -2.73
CD74P04233 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.98□□□□□ -2.73
CD74P04233 RNU6-300P-201ENST00000459080 104 ntBASIC-1.98□□□□□ -2.73
CD74P04233 RNU7-119P-201ENST00000459279 63 ntBASIC-1.98□□□□□ -2.73
CD74P04233 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.98□□□□□ -2.73
CD74P04233 SNORD73B-201ENST00000364394 72 ntBASIC-1.99□□□□□ -2.73
CD74P04233 RNY4P9-201ENST00000363194 97 ntBASIC-2□□□□□ -2.73
CD74P04233 MIR1255A-201ENST00000408338 113 ntBASIC-2□□□□□ -2.73
CD74P04233 MIR379-201ENST00000362218 67 ntBASIC-2.01□□□□□ -2.73
CD74P04233 RNU6-857P-201ENST00000515893 110 ntBASIC-2.01□□□□□ -2.73
CD74P04233 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.02□□□□□ -2.73
CD74P04233 RNA5SP170-201ENST00000517150 101 ntBASIC-2.02□□□□□ -2.73
CD74P04233 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.03□□□□□ -2.73
CD74P04233 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.03□□□□□ -2.73
CD74P04233 U6.111-201ENST00000636093 83 ntBASIC-2.03□□□□□ -2.73
CD74P04233 RNU6-940P-201ENST00000363433 104 ntBASIC-2.04□□□□□ -2.74
CD74P04233 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.04□□□□□ -2.74
CD74P04233 SNORD45.2-201ENST00000363552 72 ntBASIC-2.04□□□□□ -2.74
CD74P04233 RNU6-419P-201ENST00000517030 63 ntBASIC-2.04□□□□□ -2.74
CD74P04233 MIR4511-201ENST00000582784 87 ntBASIC-2.04□□□□□ -2.74
CD74P04233 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.04□□□□□ -2.74
CD74P04233 SNORA26.2-201ENST00000390922 122 ntBASIC-2.05□□□□□ -2.74
CD74P04233 AC103706.3-201ENST00000636297 85 ntBASIC-2.05□□□□□ -2.74
CD74P04233 RNU6-230P-201ENST00000362457 104 ntBASIC-2.06□□□□□ -2.74
CD74P04233 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.06□□□□□ -2.74
CD74P04233 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.06□□□□□ -2.74
CD74P04233 RNY4P29-201ENST00000410801 97 ntBASIC-2.06□□□□□ -2.74
CD74P04233 RNU6-539P-201ENST00000516665 103 ntBASIC-2.06□□□□□ -2.74
CD74P04233 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.06□□□□□ -2.74
CD74P04233 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.07□□□□□ -2.74
CD74P04233 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.07□□□□□ -2.74
CD74P04233 RNU6-279P-201ENST00000391297 101 ntBASIC-2.07□□□□□ -2.74
CD74P04233 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.08□□□□□ -2.74
CD74P04233 MIR3938-201ENST00000582157 103 ntBASIC-2.08□□□□□ -2.74
CD74P04233 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.09□□□□□ -2.74
CD74P04233 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.09□□□□□ -2.74
CD74P04233 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.1□□□□□ -2.75
CD74P04233 MIR4679-1-201ENST00000637619 75 ntBASIC-2.1□□□□□ -2.75
CD74P04233 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.11□□□□□ -2.75
CD74P04233 RNU6-176P-201ENST00000517196 105 ntBASIC-2.11□□□□□ -2.75
CD74P04233 RNU6-800P-201ENST00000384473 103 ntBASIC-2.12□□□□□ -2.75
CD74P04233 RNA5SP225-201ENST00000410874 135 ntBASIC-2.12□□□□□ -2.75
CD74P04233 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.14□□□□□ -2.75
CD74P04233 SNORD78.1-201ENST00000390866 65 ntBASIC-2.15□□□□□ -2.75
CD74P04233 RNU6-345P-201ENST00000517001 107 ntBASIC-2.15□□□□□ -2.75
CD74P04233 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.16□□□□□ -2.76
CD74P04233 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms