Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU6-649P-201ENST00000384463 107 ntBASIC-1.88□□□□□ -2.71
CPSF4O95639 RNU6-406P-201ENST00000516470 107 ntBASIC-1.88□□□□□ -2.71
CPSF4O95639 RNU6-230P-201ENST00000362457 104 ntBASIC-1.89□□□□□ -2.71
CPSF4O95639 SNORD60-201ENST00000383903 83 ntBASIC-1.89□□□□□ -2.71
CPSF4O95639 RNU6-820P-201ENST00000384273 107 ntBASIC-1.89□□□□□ -2.71
CPSF4O95639 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.89□□□□□ -2.71
CPSF4O95639 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.9□□□□□ -2.71
CPSF4O95639 MIR581-201ENST00000384895 96 ntBASIC-1.9□□□□□ -2.71
CPSF4O95639 snoU13.10-201ENST00000459301 103 ntBASIC-1.9□□□□□ -2.71
CPSF4O95639 MIR466-201ENST00000580653 84 ntBASIC-1.9□□□□□ -2.71
CPSF4O95639 MIR548W-201ENST00000581970 74 ntBASIC-1.9□□□□□ -2.71
CPSF4O95639 SNORA25.5-201ENST00000363782 126 ntBASIC-1.91□□□□□ -2.72
CPSF4O95639 SNORA40B-201ENST00000385573 128 ntBASIC-1.91□□□□□ -2.72
CPSF4O95639 RNU6-122P-201ENST00000516818 107 ntBASIC-1.91□□□□□ -2.72
CPSF4O95639 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.91□□□□□ -2.72
CPSF4O95639 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.91□□□□□ -2.72
CPSF4O95639 MIR4748-201ENST00000578076 82 ntBASIC-1.92□□□□□ -2.72
CPSF4O95639 SNORA25.4-201ENST00000363666 124 ntBASIC-1.93□□□□□ -2.72
CPSF4O95639 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.93□□□□□ -2.72
CPSF4O95639 MIR548N-201ENST00000408742 75 ntBASIC-1.93□□□□□ -2.72
CPSF4O95639 MIR5582-201ENST00000579697 68 ntBASIC-1.93□□□□□ -2.72
CPSF4O95639 AC062037.1-201ENST00000605302 128 ntBASIC-1.93□□□□□ -2.72
CPSF4O95639 RNU6-361P-201ENST00000364454 107 ntBASIC-1.94□□□□□ -2.72
CPSF4O95639 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.94□□□□□ -2.72
CPSF4O95639 SNORA17.4-201ENST00000391287 132 ntBASIC-1.94□□□□□ -2.72
CPSF4O95639 SNORA40.16-201ENST00000517238 121 ntBASIC-1.94□□□□□ -2.72
CPSF4O95639 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.95□□□□□ -2.72
CPSF4O95639 SNORD30.1-201ENST00000391309 70 ntBASIC-1.95□□□□□ -2.72
CPSF4O95639 RNU6-530P-201ENST00000391180 107 ntBASIC-1.96□□□□□ -2.72
CPSF4O95639 RNU7-119P-201ENST00000459279 63 ntBASIC-1.96□□□□□ -2.72
CPSF4O95639 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.97□□□□□ -2.72
CPSF4O95639 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.99□□□□□ -2.73
CPSF4O95639 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.99□□□□□ -2.73
CPSF4O95639 SNORD45.2-201ENST00000363552 72 ntBASIC-2□□□□□ -2.73
CPSF4O95639 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.01□□□□□ -2.73
CPSF4O95639 AL451105.1-201ENST00000450005 189 ntBASIC-2.01□□□□□ -2.73
CPSF4O95639 RNU6-871P-201ENST00000516122 100 ntBASIC-2.01□□□□□ -2.73
CPSF4O95639 MIR4511-201ENST00000582784 87 ntBASIC-2.01□□□□□ -2.73
CPSF4O95639 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.02□□□□□ -2.73
CPSF4O95639 RNU6-803P-201ENST00000516034 102 ntBASIC-2.02□□□□□ -2.73
CPSF4O95639 MIR3202-2-201ENST00000635980 79 ntBASIC-2.02□□□□□ -2.73
CPSF4O95639 U2.22-201ENST00000636441 106 ntBASIC-2.02□□□□□ -2.73
CPSF4O95639 RNU6-940P-201ENST00000363433 104 ntBASIC-2.03□□□□□ -2.73
CPSF4O95639 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.03□□□□□ -2.73
CPSF4O95639 AC097484.2-201ENST00000509147 251 ntBASIC-2.03□□□□□ -2.73
CPSF4O95639 U6.111-201ENST00000636093 83 ntBASIC-2.03□□□□□ -2.73
CPSF4O95639 MIR4426-201ENST00000640330 63 ntBASIC-2.03□□□□□ -2.73
CPSF4O95639 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.04□□□□□ -2.74
CPSF4O95639 AC103706.3-201ENST00000636297 85 ntBASIC-2.04□□□□□ -2.74
CPSF4O95639 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.05□□□□□ -2.74
CPSF4O95639 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
CPSF4O95639 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.05□□□□□ -2.74
CPSF4O95639 RNU6-857P-201ENST00000515893 110 ntBASIC-2.06□□□□□ -2.74
CPSF4O95639 RNU6-539P-201ENST00000516665 103 ntBASIC-2.06□□□□□ -2.74
CPSF4O95639 MIR3938-201ENST00000582157 103 ntBASIC-2.06□□□□□ -2.74
CPSF4O95639 RNY4P9-201ENST00000363194 97 ntBASIC-2.07□□□□□ -2.74
CPSF4O95639 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.07□□□□□ -2.74
CPSF4O95639 FTX_4.1-201ENST00000616291 147 ntBASIC-2.07□□□□□ -2.74
CPSF4O95639 MIR379-201ENST00000362218 67 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 RNU6-573P-201ENST00000383938 106 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 RNU6-300P-201ENST00000459080 104 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.08□□□□□ -2.74
CPSF4O95639 SNORD73B-201ENST00000364394 72 ntBASIC-2.09□□□□□ -2.74
CPSF4O95639 RNU6-590P-201ENST00000365039 107 ntBASIC-2.09□□□□□ -2.74
CPSF4O95639 MIR1255A-201ENST00000408338 113 ntBASIC-2.09□□□□□ -2.74
CPSF4O95639 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.09□□□□□ -2.74
CPSF4O95639 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.1□□□□□ -2.75
CPSF4O95639 RNU6-279P-201ENST00000391297 101 ntBASIC-2.1□□□□□ -2.75
CPSF4O95639 RNU6-68P-201ENST00000516576 104 ntBASIC-2.1□□□□□ -2.75
CPSF4O95639 RNU6-419P-201ENST00000517030 63 ntBASIC-2.1□□□□□ -2.75
CPSF4O95639 RNU6-176P-201ENST00000517196 105 ntBASIC-2.1□□□□□ -2.75
CPSF4O95639 RNU6-912P-201ENST00000363800 104 ntBASIC-2.11□□□□□ -2.75
CPSF4O95639 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.11□□□□□ -2.75
CPSF4O95639 MIR4679-1-201ENST00000637619 75 ntBASIC-2.11□□□□□ -2.75
CPSF4O95639 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.12□□□□□ -2.75
CPSF4O95639 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.12□□□□□ -2.75
CPSF4O95639 RNU6-800P-201ENST00000384473 103 ntBASIC-2.13□□□□□ -2.75
CPSF4O95639 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.13□□□□□ -2.75
CPSF4O95639 SNORD113-3-201ENST00000364830 72 ntBASIC-2.14□□□□□ -2.75
CPSF4O95639 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.14□□□□□ -2.75
CPSF4O95639 RNY4P29-201ENST00000410801 97 ntBASIC-2.15□□□□□ -2.75
CPSF4O95639 RNA5SP170-201ENST00000517150 101 ntBASIC-2.15□□□□□ -2.75
CPSF4O95639 RNU6-742P-201ENST00000365289 107 ntBASIC-2.16□□□□□ -2.76
CPSF4O95639 SNORA26.2-201ENST00000390922 122 ntBASIC-2.16□□□□□ -2.76
CPSF4O95639 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.17□□□□□ -2.76
CPSF4O95639 RNU6-141P-201ENST00000410499 105 ntBASIC-2.17□□□□□ -2.76
CPSF4O95639 AC110620.1-201ENST00000416042 228 ntBASIC-2.17□□□□□ -2.76
CPSF4O95639 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.18□□□□□ -2.76
CPSF4O95639 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.19□□□□□ -2.76
CPSF4O95639 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.19□□□□□ -2.76
CPSF4O95639 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.21□□□□□ -2.76
CPSF4O95639 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.21□□□□□ -2.76
CPSF4O95639 SNORD78.1-201ENST00000390866 65 ntBASIC-2.21□□□□□ -2.76
CPSF4O95639 RNA5SP225-201ENST00000410874 135 ntBASIC-2.21□□□□□ -2.76
CPSF4O95639 MIR5693-201ENST00000577722 73 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms