Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.41□□□□□ -2.8
SHOX2O60902 RNU6-788P-201ENST00000390967 104 ntBASIC-2.41□□□□□ -2.8
SHOX2O60902 AP001318.4-201ENST00000616637 121 ntBASIC-2.41□□□□□ -2.8
SHOX2O60902 RNU6-886P-201ENST00000384319 105 ntBASIC-2.42□□□□□ -2.8
SHOX2O60902 RNU6-327P-201ENST00000516270 127 ntBASIC-2.42□□□□□ -2.8
SHOX2O60902 RNU6-388P-201ENST00000517012 105 ntBASIC-2.42□□□□□ -2.8
SHOX2O60902 RNU6-389P-201ENST00000517048 105 ntBASIC-2.42□□□□□ -2.8
SHOX2O60902 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.43□□□□□ -2.8
SHOX2O60902 SNORA19-201ENST00000384737 128 ntBASIC-2.43□□□□□ -2.8
SHOX2O60902 RNU6-219P-201ENST00000364728 107 ntBASIC-2.44□□□□□ -2.8
SHOX2O60902 MIR548H4-201ENST00000408689 111 ntBASIC-2.45□□□□□ -2.8
SHOX2O60902 RNU6-315P-201ENST00000362666 107 ntBASIC-2.46□□□□□ -2.8
SHOX2O60902 AP001094.1-201ENST00000579805 193 ntBASIC-2.46□□□□□ -2.8
SHOX2O60902 MIR4484-201ENST00000582855 83 ntBASIC-2.46□□□□□ -2.8
SHOX2O60902 MIR664A-201ENST00000626086 82 ntBASIC-2.46□□□□□ -2.8
SHOX2O60902 RNU4-85P-201ENST00000364675 123 ntBASIC-2.48□□□□□ -2.81
SHOX2O60902 RNU6-380P-201ENST00000410207 107 ntBASIC-2.48□□□□□ -2.81
SHOX2O60902 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.48□□□□□ -2.81
SHOX2O60902 RNU6-346P-201ENST00000516288 111 ntBASIC-2.48□□□□□ -2.81
SHOX2O60902 MIR548BB-201ENST00000626714 66 ntBASIC-2.48□□□□□ -2.81
SHOX2O60902 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.49□□□□□ -2.81
SHOX2O60902 SNORA25.5-201ENST00000363782 126 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 SNORD116-14-201ENST00000383894 92 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 SNORD116-17-201ENST00000383929 92 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 SNORD116-15-201ENST00000384445 92 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 SNORD116-19-201ENST00000384729 92 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 AL117351.2-201ENST00000513571 157 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 RNU6-267P-201ENST00000516714 103 ntBASIC-2.5□□□□□ -2.81
SHOX2O60902 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.51□□□□□ -2.81
SHOX2O60902 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.51□□□□□ -2.81
SHOX2O60902 RNY1P5-201ENST00000383890 115 ntBASIC-2.52□□□□□ -2.81
SHOX2O60902 MIR548X-201ENST00000580069 75 ntBASIC-2.52□□□□□ -2.81
SHOX2O60902 MIR4317-201ENST00000637586 65 ntBASIC-2.52□□□□□ -2.81
SHOX2O60902 RNU6-463P-201ENST00000384340 107 ntBASIC-2.53□□□□□ -2.81
SHOX2O60902 SNORD116-22-201ENST00000384430 92 ntBASIC-2.53□□□□□ -2.81
SHOX2O60902 MIR545-201ENST00000385085 106 ntBASIC-2.53□□□□□ -2.81
SHOX2O60902 RNU6-907P-201ENST00000390924 102 ntBASIC-2.53□□□□□ -2.81
SHOX2O60902 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.53□□□□□ -2.81
SHOX2O60902 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.53□□□□□ -2.81
SHOX2O60902 RNU6-895P-201ENST00000384125 103 ntBASIC-2.54□□□□□ -2.82
SHOX2O60902 RNU6-916P-201ENST00000516088 109 ntBASIC-2.54□□□□□ -2.82
SHOX2O60902 RNU6-675P-201ENST00000384236 104 ntBASIC-2.55□□□□□ -2.82
SHOX2O60902 RNU6-411P-201ENST00000384451 107 ntBASIC-2.55□□□□□ -2.82
SHOX2O60902 MT-TG-201ENST00000387429 68 ntBASIC-2.55□□□□□ -2.82
SHOX2O60902 RNU6-687P-201ENST00000516443 89 ntBASIC-2.55□□□□□ -2.82
SHOX2O60902 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.56□□□□□ -2.82
SHOX2O60902 AC006160.2-201ENST00000637708 154 ntBASIC-2.56□□□□□ -2.82
SHOX2O60902 MIR154-201ENST00000385243 84 ntBASIC-2.57□□□□□ -2.82
SHOX2O60902 MIR3938-201ENST00000582157 103 ntBASIC-2.57□□□□□ -2.82
SHOX2O60902 MIR2052-201ENST00000636055 55 ntBASIC-2.57□□□□□ -2.82
SHOX2O60902 RNU6-255P-201ENST00000516957 105 ntBASIC-2.58□□□□□ -2.82
SHOX2O60902 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.59□□□□□ -2.82
SHOX2O60902 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.59□□□□□ -2.82
SHOX2O60902 RNU6-422P-201ENST00000384632 107 ntBASIC-2.59□□□□□ -2.82
SHOX2O60902 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.59□□□□□ -2.82
SHOX2O60902 RNU6-70P-201ENST00000516438 60 ntBASIC-2.59□□□□□ -2.82
SHOX2O60902 RNU6-940P-201ENST00000363433 104 ntBASIC-2.61□□□□□ -2.83
SHOX2O60902 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.61□□□□□ -2.83
SHOX2O60902 RNU6-776P-201ENST00000364403 104 ntBASIC-2.63□□□□□ -2.83
SHOX2O60902 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.63□□□□□ -2.83
SHOX2O60902 SNORD115.2-201ENST00000391126 59 ntBASIC-2.63□□□□□ -2.83
SHOX2O60902 MIR548AL-201ENST00000578416 97 ntBASIC-2.63□□□□□ -2.83
SHOX2O60902 MALAT1.1-201ENST00000618249 95 ntBASIC-2.63□□□□□ -2.83
SHOX2O60902 RNU6-979P-201ENST00000383896 107 ntBASIC-2.64□□□□□ -2.83
SHOX2O60902 RNU6-959P-201ENST00000384671 107 ntBASIC-2.64□□□□□ -2.83
SHOX2O60902 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.64□□□□□ -2.83
SHOX2O60902 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-2.65□□□□□ -2.83
SHOX2O60902 SNORA25.4-201ENST00000363666 124 ntBASIC-2.66□□□□□ -2.84
SHOX2O60902 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.66□□□□□ -2.84
SHOX2O60902 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.66□□□□□ -2.84
SHOX2O60902 RNU6-589P-201ENST00000516485 107 ntBASIC-2.66□□□□□ -2.84
SHOX2O60902 MIR3134-201ENST00000579433 74 ntBASIC-2.66□□□□□ -2.84
SHOX2O60902 MIR4511-201ENST00000582784 87 ntBASIC-2.66□□□□□ -2.84
SHOX2O60902 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.67□□□□□ -2.84
SHOX2O60902 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.67□□□□□ -2.84
SHOX2O60902 MIR4712-201ENST00000583750 82 ntBASIC-2.68□□□□□ -2.84
SHOX2O60902 AC103706.3-201ENST00000636297 85 ntBASIC-2.68□□□□□ -2.84
SHOX2O60902 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.69□□□□□ -2.84
SHOX2O60902 RNU6-634P-201ENST00000459134 106 ntBASIC-2.69□□□□□ -2.84
SHOX2O60902 MIR1245B-201ENST00000636115 69 ntBASIC-2.7□□□□□ -2.84
SHOX2O60902 RNU6-808P-201ENST00000391233 108 ntBASIC-2.71□□□□□ -2.84
SHOX2O60902 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.72□□□□□ -2.84
SHOX2O60902 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.72□□□□□ -2.84
SHOX2O60902 SNORA40.13-201ENST00000516379 120 ntBASIC-2.73□□□□□ -2.85
SHOX2O60902 MIR450A1-201ENST00000362262 91 ntBASIC-2.74□□□□□ -2.85
SHOX2O60902 RNU6-663P-201ENST00000391105 106 ntBASIC-2.74□□□□□ -2.85
SHOX2O60902 AL031737.1-201ENST00000450125 223 ntBASIC-2.74□□□□□ -2.85
SHOX2O60902 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.75□□□□□ -2.85
SHOX2O60902 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.75□□□□□ -2.85
SHOX2O60902 RNU6-59P-201ENST00000384787 107 ntBASIC-2.75□□□□□ -2.85
SHOX2O60902 RNU7-171P-201ENST00000459581 62 ntBASIC-2.75□□□□□ -2.85
SHOX2O60902 AC110620.1-201ENST00000416042 228 ntBASIC-2.76□□□□□ -2.85
SHOX2O60902 MIR5588-201ENST00000581890 63 ntBASIC-2.76□□□□□ -2.85
SHOX2O60902 MIR488-201ENST00000365739 83 ntBASIC-2.77□□□□□ -2.85
SHOX2O60902 RNU6-844P-201ENST00000517175 102 ntBASIC-2.77□□□□□ -2.85
SHOX2O60902 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.78□□□□□ -2.85
SHOX2O60902 AC008267.6-201ENST00000441664 139 ntBASIC-2.78□□□□□ -2.85
SHOX2O60902 RNU4-33P-201ENST00000364316 85 ntBASIC-2.8□□□□□ -2.86
SHOX2O60902 RNU6-446P-201ENST00000362827 106 ntBASIC-2.81□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms