Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 RNU7-119P-201ENST00000459279 63 ntBASIC-1.87□□□□□ -2.71
XRCC3O43542 RNU6-118P-201ENST00000516552 102 ntBASIC-1.87□□□□□ -2.71
XRCC3O43542 SNORD18.1-201ENST00000363807 70 ntBASIC-1.88□□□□□ -2.71
XRCC3O43542 RNU6-974P-201ENST00000384099 108 ntBASIC-1.89□□□□□ -2.71
XRCC3O43542 RNU6-563P-201ENST00000364872 108 ntBASIC-1.9□□□□□ -2.71
XRCC3O43542 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.91□□□□□ -2.72
XRCC3O43542 SNORA40.16-201ENST00000517238 121 ntBASIC-1.92□□□□□ -2.72
XRCC3O43542 MIR3938-201ENST00000582157 103 ntBASIC-1.93□□□□□ -2.72
XRCC3O43542 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.94□□□□□ -2.72
XRCC3O43542 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.95□□□□□ -2.72
XRCC3O43542 RNU6-695P-201ENST00000391157 104 ntBASIC-1.95□□□□□ -2.72
XRCC3O43542 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.95□□□□□ -2.72
XRCC3O43542 RNU6-980P-201ENST00000516925 103 ntBASIC-1.95□□□□□ -2.72
XRCC3O43542 MIR466-201ENST00000580653 84 ntBASIC-1.95□□□□□ -2.72
XRCC3O43542 MIR487B-201ENST00000385021 84 ntBASIC-1.96□□□□□ -2.72
XRCC3O43542 AC110620.1-201ENST00000416042 228 ntBASIC-1.96□□□□□ -2.72
XRCC3O43542 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.97□□□□□ -2.72
XRCC3O43542 RNU6-520P-201ENST00000384717 104 ntBASIC-1.97□□□□□ -2.72
XRCC3O43542 RNY3P8-201ENST00000411366 126 ntBASIC-1.98□□□□□ -2.73
XRCC3O43542 AC013734.1-201ENST00000619329 111 ntBASIC-1.98□□□□□ -2.73
XRCC3O43542 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.99□□□□□ -2.73
XRCC3O43542 Y_RNA.386-201ENST00000383913 105 ntBASIC-2□□□□□ -2.73
XRCC3O43542 RNU6-471P-201ENST00000383944 106 ntBASIC-2.02□□□□□ -2.73
XRCC3O43542 AC114801.3-201ENST00000510231 177 ntBASIC-2.02□□□□□ -2.73
XRCC3O43542 SNORD45.2-201ENST00000363552 72 ntBASIC-2.04□□□□□ -2.74
XRCC3O43542 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.05□□□□□ -2.74
XRCC3O43542 AC108019.1-201ENST00000512540 175 ntBASIC-2.05□□□□□ -2.74
XRCC3O43542 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.06□□□□□ -2.74
XRCC3O43542 SNORD60-201ENST00000383903 83 ntBASIC-2.07□□□□□ -2.74
XRCC3O43542 AL451105.1-201ENST00000450005 189 ntBASIC-2.07□□□□□ -2.74
XRCC3O43542 SNORA72.7-201ENST00000516349 94 ntBASIC-2.07□□□□□ -2.74
XRCC3O43542 U6.97-201ENST00000636904 101 ntBASIC-2.07□□□□□ -2.74
XRCC3O43542 MIR3123-201ENST00000583417 75 ntBASIC-2.08□□□□□ -2.74
XRCC3O43542 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.09□□□□□ -2.74
XRCC3O43542 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.09□□□□□ -2.74
XRCC3O43542 MIR4756-201ENST00000577874 78 ntBASIC-2.09□□□□□ -2.74
XRCC3O43542 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.1□□□□□ -2.75
XRCC3O43542 MIR202-201ENST00000362219 110 ntBASIC-2.11□□□□□ -2.75
XRCC3O43542 RNU6-361P-201ENST00000364454 107 ntBASIC-2.11□□□□□ -2.75
XRCC3O43542 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.11□□□□□ -2.75
XRCC3O43542 SNORD18C-201ENST00000362704 69 ntBASIC-2.12□□□□□ -2.75
XRCC3O43542 RNU6-530P-201ENST00000391180 107 ntBASIC-2.12□□□□□ -2.75
XRCC3O43542 RNU6-419P-201ENST00000517030 63 ntBASIC-2.12□□□□□ -2.75
XRCC3O43542 MIR3139-201ENST00000579145 76 ntBASIC-2.12□□□□□ -2.75
XRCC3O43542 MIR664B-201ENST00000626756 61 ntBASIC-2.12□□□□□ -2.75
XRCC3O43542 RNU6-841P-201ENST00000383872 107 ntBASIC-2.13□□□□□ -2.75
XRCC3O43542 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.14□□□□□ -2.75
XRCC3O43542 SNORA17.4-201ENST00000391287 132 ntBASIC-2.14□□□□□ -2.75
XRCC3O43542 MIR548N-201ENST00000408742 75 ntBASIC-2.14□□□□□ -2.75
XRCC3O43542 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.14□□□□□ -2.75
XRCC3O43542 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.18□□□□□ -2.76
XRCC3O43542 MIR581-201ENST00000384895 96 ntBASIC-2.19□□□□□ -2.76
XRCC3O43542 MT-TM-201ENST00000387377 68 ntBASIC-2.2□□□□□ -2.76
XRCC3O43542 MIR548AM-201ENST00000584298 74 ntBASIC-2.21□□□□□ -2.76
XRCC3O43542 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.22□□□□□ -2.76
XRCC3O43542 RNU6-638P-201ENST00000516582 104 ntBASIC-2.22□□□□□ -2.76
XRCC3O43542 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.22□□□□□ -2.76
XRCC3O43542 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.22□□□□□ -2.76
XRCC3O43542 MIR4426-201ENST00000640330 63 ntBASIC-2.22□□□□□ -2.76
XRCC3O43542 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.25□□□□□ -2.77
XRCC3O43542 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.25□□□□□ -2.77
XRCC3O43542 MIR548X-201ENST00000580069 75 ntBASIC-2.26□□□□□ -2.77
XRCC3O43542 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.27□□□□□ -2.77
XRCC3O43542 RNU6-176P-201ENST00000517196 105 ntBASIC-2.27□□□□□ -2.77
XRCC3O43542 RNU6-446P-201ENST00000362827 106 ntBASIC-2.28□□□□□ -2.77
XRCC3O43542 RNU4-88P-201ENST00000411220 86 ntBASIC-2.28□□□□□ -2.77
XRCC3O43542 RNA5SP405-201ENST00000363059 114 ntBASIC-2.3□□□□□ -2.78
XRCC3O43542 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.3□□□□□ -2.78
XRCC3O43542 RNU6-590P-201ENST00000365039 107 ntBASIC-2.3□□□□□ -2.78
XRCC3O43542 RNU6-300P-201ENST00000459080 104 ntBASIC-2.3□□□□□ -2.78
XRCC3O43542 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.31□□□□□ -2.78
XRCC3O43542 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.33□□□□□ -2.78
XRCC3O43542 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.33□□□□□ -2.78
XRCC3O43542 MIR548W-201ENST00000581970 74 ntBASIC-2.33□□□□□ -2.78
XRCC3O43542 MIR379-201ENST00000362218 67 ntBASIC-2.34□□□□□ -2.78
XRCC3O43542 RNU6-194P-201ENST00000363862 105 ntBASIC-2.34□□□□□ -2.78
XRCC3O43542 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.35□□□□□ -2.79
XRCC3O43542 snoU13.10-201ENST00000459301 103 ntBASIC-2.35□□□□□ -2.79
XRCC3O43542 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.36□□□□□ -2.79
XRCC3O43542 RNU6-742P-201ENST00000365289 107 ntBASIC-2.36□□□□□ -2.79
XRCC3O43542 AC125388.1-201ENST00000459631 156 ntBASIC-2.36□□□□□ -2.79
XRCC3O43542 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.36□□□□□ -2.79
XRCC3O43542 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.39□□□□□ -2.79
XRCC3O43542 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
XRCC3O43542 RNU6-68P-201ENST00000516576 104 ntBASIC-2.41□□□□□ -2.8
XRCC3O43542 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.41□□□□□ -2.8
XRCC3O43542 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.41□□□□□ -2.8
XRCC3O43542 RNU6-829P-201ENST00000363700 112 ntBASIC-2.42□□□□□ -2.8
XRCC3O43542 SNORD113-4-201ENST00000364802 75 ntBASIC-2.43□□□□□ -2.8
XRCC3O43542 MIR633-201ENST00000384821 98 ntBASIC-2.43□□□□□ -2.8
XRCC3O43542 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.43□□□□□ -2.8
XRCC3O43542 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.44□□□□□ -2.8
XRCC3O43542 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.44□□□□□ -2.8
XRCC3O43542 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.44□□□□□ -2.8
XRCC3O43542 MIR4748-201ENST00000578076 82 ntBASIC-2.47□□□□□ -2.8
XRCC3O43542 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.48□□□□□ -2.81
XRCC3O43542 AC139453.2-201ENST00000487255 133 ntBASIC-2.49□□□□□ -2.81
XRCC3O43542 RNU4-33P-201ENST00000364316 85 ntBASIC-2.5□□□□□ -2.81
XRCC3O43542 RNU6-912P-201ENST00000363800 104 ntBASIC-2.51□□□□□ -2.81
XRCC3O43542 AC097484.2-201ENST00000509147 251 ntBASIC-2.51□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms