Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 RNU6-172P-201ENST00000411000 93 ntBASIC-1.08□□□□□ -2.58
PCDHA1Q9Y5I3 AC110620.1-201ENST00000416042 228 ntBASIC-1.08□□□□□ -2.58
PCDHA1Q9Y5I3 MIR4490-201ENST00000582647 84 ntBASIC-1.08□□□□□ -2.58
PCDHA1Q9Y5I3 MIR3165-201ENST00000579874 75 ntBASIC-1.1□□□□□ -2.59
PCDHA1Q9Y5I3 RNU6-669P-201ENST00000365575 107 ntBASIC-1.11□□□□□ -2.59
PCDHA1Q9Y5I3 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.11□□□□□ -2.59
PCDHA1Q9Y5I3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.11□□□□□ -2.59
PCDHA1Q9Y5I3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.11□□□□□ -2.59
PCDHA1Q9Y5I3 RNU6-995P-201ENST00000391244 107 ntBASIC-1.12□□□□□ -2.59
PCDHA1Q9Y5I3 RNU6-231P-201ENST00000517122 103 ntBASIC-1.12□□□□□ -2.59
PCDHA1Q9Y5I3 MIR7110-201ENST00000612638 86 ntBASIC-1.12□□□□□ -2.59
PCDHA1Q9Y5I3 RNU7-151P-201ENST00000516930 53 ntBASIC-1.13□□□□□ -2.59
PCDHA1Q9Y5I3 MIR6502-201ENST00000617296 76 ntBASIC-1.13□□□□□ -2.59
PCDHA1Q9Y5I3 MIR4320-201ENST00000636981 65 ntBASIC-1.13□□□□□ -2.59
PCDHA1Q9Y5I3 RNU6-590P-201ENST00000365039 107 ntBASIC-1.14□□□□□ -2.59
PCDHA1Q9Y5I3 MIR29B1-201ENST00000385015 81 ntBASIC-1.14□□□□□ -2.59
PCDHA1Q9Y5I3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.15□□□□□ -2.59
PCDHA1Q9Y5I3 MIR3170-201ENST00000582699 77 ntBASIC-1.15□□□□□ -2.59
PCDHA1Q9Y5I3 MIR6818-201ENST00000621576 65 ntBASIC-1.15□□□□□ -2.59
PCDHA1Q9Y5I3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.16□□□□□ -2.6
PCDHA1Q9Y5I3 MIR507-201ENST00000385234 94 ntBASIC-1.16□□□□□ -2.6
PCDHA1Q9Y5I3 MIR466-201ENST00000580653 84 ntBASIC-1.16□□□□□ -2.6
PCDHA1Q9Y5I3 MIR3938-201ENST00000582157 103 ntBASIC-1.16□□□□□ -2.6
PCDHA1Q9Y5I3 MIR409-201ENST00000362237 79 ntBASIC-1.17□□□□□ -2.6
PCDHA1Q9Y5I3 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.17□□□□□ -2.6
PCDHA1Q9Y5I3 RNU7-119P-201ENST00000459279 63 ntBASIC-1.17□□□□□ -2.6
PCDHA1Q9Y5I3 RNU7-160P-201ENST00000516660 62 ntBASIC-1.17□□□□□ -2.6
PCDHA1Q9Y5I3 MIR7978-201ENST00000636158 59 ntBASIC-1.17□□□□□ -2.6
PCDHA1Q9Y5I3 AC138207.3-201ENST00000585289 166 ntBASIC-1.18□□□□□ -2.6
PCDHA1Q9Y5I3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
PCDHA1Q9Y5I3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.19□□□□□ -2.6
PCDHA1Q9Y5I3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.19□□□□□ -2.6
PCDHA1Q9Y5I3 MIR5591-201ENST00000578248 65 ntBASIC-1.19□□□□□ -2.6
PCDHA1Q9Y5I3 MIR520D-201ENST00000385002 87 ntBASIC-1.2□□□□□ -2.6
PCDHA1Q9Y5I3 RNA5SP266-201ENST00000410273 108 ntBASIC-1.2□□□□□ -2.6
PCDHA1Q9Y5I3 AC091912.2-201ENST00000624798 167 ntBASIC-1.2□□□□□ -2.6
PCDHA1Q9Y5I3 MIR579-201ENST00000385221 98 ntBASIC-1.21□□□□□ -2.6
PCDHA1Q9Y5I3 MIR125B1-201ENST00000385236 88 ntBASIC-1.21□□□□□ -2.6
PCDHA1Q9Y5I3 HLA-S-202ENST00000425174 53 ntBASIC-1.21□□□□□ -2.6
PCDHA1Q9Y5I3 RNU6-520P-201ENST00000384717 104 ntBASIC-1.23□□□□□ -2.61
PCDHA1Q9Y5I3 RNA5SP86-201ENST00000390869 98 ntBASIC-1.23□□□□□ -2.61
PCDHA1Q9Y5I3 SNORD116.2-201ENST00000391251 93 ntBASIC-1.23□□□□□ -2.61
PCDHA1Q9Y5I3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.23□□□□□ -2.61
PCDHA1Q9Y5I3 MIR6874-201ENST00000635894 71 ntBASIC-1.23□□□□□ -2.61
PCDHA1Q9Y5I3 RNU6-608P-201ENST00000383927 104 ntBASIC-1.24□□□□□ -2.61
PCDHA1Q9Y5I3 RNU6-247P-201ENST00000362636 107 ntBASIC-1.25□□□□□ -2.61
PCDHA1Q9Y5I3 RNU6-810P-201ENST00000364001 107 ntBASIC-1.25□□□□□ -2.61
PCDHA1Q9Y5I3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.25□□□□□ -2.61
PCDHA1Q9Y5I3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.25□□□□□ -2.61
PCDHA1Q9Y5I3 SNORA40B-201ENST00000385573 128 ntBASIC-1.26□□□□□ -2.61
PCDHA1Q9Y5I3 MIR4770-201ENST00000579149 58 ntBASIC-1.26□□□□□ -2.61
PCDHA1Q9Y5I3 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.26□□□□□ -2.61
PCDHA1Q9Y5I3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.28□□□□□ -2.61
PCDHA1Q9Y5I3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.61
PCDHA1Q9Y5I3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.28□□□□□ -2.61
PCDHA1Q9Y5I3 AC125388.1-201ENST00000459631 156 ntBASIC-1.28□□□□□ -2.61
PCDHA1Q9Y5I3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.29□□□□□ -2.62
PCDHA1Q9Y5I3 AC090616.4-201ENST00000448026 115 ntBASIC-1.29□□□□□ -2.62
PCDHA1Q9Y5I3 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.29□□□□□ -2.62
PCDHA1Q9Y5I3 SNORA40.16-201ENST00000517238 121 ntBASIC-1.29□□□□□ -2.62
PCDHA1Q9Y5I3 MIR23C-201ENST00000579846 100 ntBASIC-1.29□□□□□ -2.62
PCDHA1Q9Y5I3 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.3□□□□□ -2.62
PCDHA1Q9Y5I3 MIR487B-201ENST00000385021 84 ntBASIC-1.3□□□□□ -2.62
PCDHA1Q9Y5I3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
PCDHA1Q9Y5I3 AC139453.2-201ENST00000487255 133 ntBASIC-1.3□□□□□ -2.62
PCDHA1Q9Y5I3 MIR1246-201ENST00000636535 73 ntBASIC-1.3□□□□□ -2.62
PCDHA1Q9Y5I3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.31□□□□□ -2.62
PCDHA1Q9Y5I3 RNU6-828P-201ENST00000364876 107 ntBASIC-1.32□□□□□ -2.62
PCDHA1Q9Y5I3 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.32□□□□□ -2.62
PCDHA1Q9Y5I3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.32□□□□□ -2.62
PCDHA1Q9Y5I3 SNORD63.2-201ENST00000516303 64 ntBASIC-1.32□□□□□ -2.62
PCDHA1Q9Y5I3 SNORA27.2-201ENST00000363365 126 ntBASIC-1.33□□□□□ -2.62
PCDHA1Q9Y5I3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.34□□□□□ -2.62
PCDHA1Q9Y5I3 RNU6-258P-201ENST00000390884 101 ntBASIC-1.34□□□□□ -2.62
PCDHA1Q9Y5I3 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.34□□□□□ -2.62
PCDHA1Q9Y5I3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.35□□□□□ -2.63
PCDHA1Q9Y5I3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.35□□□□□ -2.63
PCDHA1Q9Y5I3 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.36□□□□□ -2.63
PCDHA1Q9Y5I3 MIR601-201ENST00000385256 79 ntBASIC-1.36□□□□□ -2.63
PCDHA1Q9Y5I3 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.37□□□□□ -2.63
PCDHA1Q9Y5I3 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.37□□□□□ -2.63
PCDHA1Q9Y5I3 MIR1468-201ENST00000410600 86 ntBASIC-1.38□□□□□ -2.63
PCDHA1Q9Y5I3 AL627230.5-201ENST00000619807 58 ntBASIC-1.38□□□□□ -2.63
PCDHA1Q9Y5I3 SNORD18.1-201ENST00000363807 70 ntBASIC-1.39□□□□□ -2.63
PCDHA1Q9Y5I3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.39□□□□□ -2.63
PCDHA1Q9Y5I3 MIR198-201ENST00000637333 62 ntBASIC-1.39□□□□□ -2.63
PCDHA1Q9Y5I3 MIR365A-201ENST00000362260 87 ntBASIC-1.41□□□□□ -2.64
PCDHA1Q9Y5I3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.41□□□□□ -2.64
PCDHA1Q9Y5I3 RNU6-974P-201ENST00000384099 108 ntBASIC-1.41□□□□□ -2.64
PCDHA1Q9Y5I3 MIR548H1-201ENST00000408610 102 ntBASIC-1.41□□□□□ -2.64
PCDHA1Q9Y5I3 AC108019.1-201ENST00000512540 175 ntBASIC-1.41□□□□□ -2.64
PCDHA1Q9Y5I3 MIR4756-201ENST00000577874 78 ntBASIC-1.41□□□□□ -2.64
PCDHA1Q9Y5I3 MIR4441-201ENST00000582623 100 ntBASIC-1.43□□□□□ -2.64
PCDHA1Q9Y5I3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.44□□□□□ -2.64
PCDHA1Q9Y5I3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
PCDHA1Q9Y5I3 AC018880.2-201ENST00000414265 201 ntBASIC-1.44□□□□□ -2.64
PCDHA1Q9Y5I3 RNU6-446P-201ENST00000362827 106 ntBASIC-1.46□□□□□ -2.64
PCDHA1Q9Y5I3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.47□□□□□ -2.64
PCDHA1Q9Y5I3 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.48□□□□□ -2.65
PCDHA1Q9Y5I3 SNORD45.2-201ENST00000363552 72 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms