Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.8□□□□□ -2.7
CHMP1AQ9HD42 RNU6-669P-201ENST00000365575 107 ntBASIC-1.8□□□□□ -2.7
CHMP1AQ9HD42 RNU6-649P-201ENST00000384463 107 ntBASIC-1.8□□□□□ -2.7
CHMP1AQ9HD42 RNU6-79P-201ENST00000362511 107 ntBASIC-1.81□□□□□ -2.7
CHMP1AQ9HD42 U6.111-201ENST00000636093 83 ntBASIC-1.81□□□□□ -2.7
CHMP1AQ9HD42 RNU6-10P-201ENST00000384036 107 ntBASIC-1.82□□□□□ -2.7
CHMP1AQ9HD42 SNORD63.2-201ENST00000516303 64 ntBASIC-1.82□□□□□ -2.7
CHMP1AQ9HD42 RNA5SP192-201ENST00000364404 120 ntBASIC-1.83□□□□□ -2.7
CHMP1AQ9HD42 RNU6-122P-201ENST00000516818 107 ntBASIC-1.83□□□□□ -2.7
CHMP1AQ9HD42 RNU6-231P-201ENST00000517122 103 ntBASIC-1.83□□□□□ -2.7
CHMP1AQ9HD42 MIR7110-201ENST00000612638 86 ntBASIC-1.83□□□□□ -2.7
CHMP1AQ9HD42 MIR6502-201ENST00000617296 76 ntBASIC-1.83□□□□□ -2.7
CHMP1AQ9HD42 RNA5SP67-201ENST00000516422 131 ntBASIC-1.84□□□□□ -2.7
CHMP1AQ9HD42 RNU6-539P-201ENST00000516665 103 ntBASIC-1.84□□□□□ -2.7
CHMP1AQ9HD42 AC138207.3-201ENST00000585289 166 ntBASIC-1.84□□□□□ -2.7
CHMP1AQ9HD42 RNU7-160P-201ENST00000516660 62 ntBASIC-1.85□□□□□ -2.71
CHMP1AQ9HD42 RNU6-706P-201ENST00000517229 104 ntBASIC-1.85□□□□□ -2.71
CHMP1AQ9HD42 SNORA27.2-201ENST00000363365 126 ntBASIC-1.86□□□□□ -2.71
CHMP1AQ9HD42 MIR4511-201ENST00000582784 87 ntBASIC-1.86□□□□□ -2.71
CHMP1AQ9HD42 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.87□□□□□ -2.71
CHMP1AQ9HD42 RNU6-400P-201ENST00000391173 106 ntBASIC-1.88□□□□□ -2.71
CHMP1AQ9HD42 AC120024.2-201ENST00000576526 175 ntBASIC-1.88□□□□□ -2.71
CHMP1AQ9HD42 RNU6-810P-201ENST00000364001 107 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 RNU6-776P-201ENST00000364403 104 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 RNU6-974P-201ENST00000384099 108 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 SNORD116.2-201ENST00000391251 93 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 RNA5SP476-201ENST00000516613 103 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 AC103706.3-201ENST00000636297 85 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 MIR4662A-201ENST00000637499 67 ntBASIC-1.89□□□□□ -2.71
CHMP1AQ9HD42 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.9□□□□□ -2.71
CHMP1AQ9HD42 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.9□□□□□ -2.71
CHMP1AQ9HD42 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.91□□□□□ -2.72
CHMP1AQ9HD42 RNU6-563P-201ENST00000364872 108 ntBASIC-1.91□□□□□ -2.72
CHMP1AQ9HD42 MIR3165-201ENST00000579874 75 ntBASIC-1.91□□□□□ -2.72
CHMP1AQ9HD42 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.92□□□□□ -2.72
CHMP1AQ9HD42 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.92□□□□□ -2.72
CHMP1AQ9HD42 MIR3115-201ENST00000577915 68 ntBASIC-1.92□□□□□ -2.72
CHMP1AQ9HD42 MIR4520-1-201ENST00000582609 70 ntBASIC-1.92□□□□□ -2.72
CHMP1AQ9HD42 RNU6-800P-201ENST00000384473 103 ntBASIC-1.93□□□□□ -2.72
CHMP1AQ9HD42 MIR1468-201ENST00000410600 86 ntBASIC-1.93□□□□□ -2.72
CHMP1AQ9HD42 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.93□□□□□ -2.72
CHMP1AQ9HD42 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.94□□□□□ -2.72
CHMP1AQ9HD42 RNU6-828P-201ENST00000364876 107 ntBASIC-1.95□□□□□ -2.72
CHMP1AQ9HD42 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.96□□□□□ -2.72
CHMP1AQ9HD42 SNORA40B-201ENST00000385573 128 ntBASIC-1.96□□□□□ -2.72
CHMP1AQ9HD42 MIR409-201ENST00000362237 79 ntBASIC-1.97□□□□□ -2.72
CHMP1AQ9HD42 RNU6-940P-201ENST00000363433 104 ntBASIC-1.97□□□□□ -2.72
CHMP1AQ9HD42 SNORA40.16-201ENST00000517238 121 ntBASIC-1.98□□□□□ -2.73
CHMP1AQ9HD42 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.98□□□□□ -2.73
CHMP1AQ9HD42 HLA-S-202ENST00000425174 53 ntBASIC-1.99□□□□□ -2.73
CHMP1AQ9HD42 RNU7-119P-201ENST00000459279 63 ntBASIC-1.99□□□□□ -2.73
CHMP1AQ9HD42 HAR1A.1-201ENST00000459583 118 ntBASIC-1.99□□□□□ -2.73
CHMP1AQ9HD42 MIR5591-201ENST00000578248 65 ntBASIC-1.99□□□□□ -2.73
CHMP1AQ9HD42 RNY3P8-201ENST00000411366 126 ntBASIC-2□□□□□ -2.73
CHMP1AQ9HD42 RNU6-1206P-201ENST00000516339 103 ntBASIC-2□□□□□ -2.73
CHMP1AQ9HD42 MIR4770-201ENST00000579149 58 ntBASIC-2.01□□□□□ -2.73
CHMP1AQ9HD42 AC013734.1-201ENST00000619329 111 ntBASIC-2.01□□□□□ -2.73
CHMP1AQ9HD42 MIR4320-201ENST00000636981 65 ntBASIC-2.02□□□□□ -2.73
CHMP1AQ9HD42 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.03□□□□□ -2.73
CHMP1AQ9HD42 MIR466-201ENST00000580653 84 ntBASIC-2.03□□□□□ -2.73
CHMP1AQ9HD42 MIR3938-201ENST00000582157 103 ntBASIC-2.03□□□□□ -2.73
CHMP1AQ9HD42 RNU6-520P-201ENST00000384717 104 ntBASIC-2.04□□□□□ -2.74
CHMP1AQ9HD42 RNU6-695P-201ENST00000391157 104 ntBASIC-2.05□□□□□ -2.74
CHMP1AQ9HD42 AC110620.1-201ENST00000416042 228 ntBASIC-2.05□□□□□ -2.74
CHMP1AQ9HD42 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.06□□□□□ -2.74
CHMP1AQ9HD42 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.09□□□□□ -2.74
CHMP1AQ9HD42 RNA5SP86-201ENST00000390869 98 ntBASIC-2.1□□□□□ -2.75
CHMP1AQ9HD42 RNA5SP266-201ENST00000410273 108 ntBASIC-2.1□□□□□ -2.75
CHMP1AQ9HD42 U6.97-201ENST00000636904 101 ntBASIC-2.1□□□□□ -2.75
CHMP1AQ9HD42 AC114801.3-201ENST00000510231 177 ntBASIC-2.12□□□□□ -2.75
CHMP1AQ9HD42 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.13□□□□□ -2.75
CHMP1AQ9HD42 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.13□□□□□ -2.75
CHMP1AQ9HD42 RNU6-471P-201ENST00000383944 106 ntBASIC-2.14□□□□□ -2.75
CHMP1AQ9HD42 MIR548H1-201ENST00000408610 102 ntBASIC-2.15□□□□□ -2.75
CHMP1AQ9HD42 MIR3123-201ENST00000583417 75 ntBASIC-2.15□□□□□ -2.75
CHMP1AQ9HD42 MIR202-201ENST00000362219 110 ntBASIC-2.16□□□□□ -2.76
CHMP1AQ9HD42 RNU6-226P-201ENST00000363778 107 ntBASIC-2.16□□□□□ -2.76
CHMP1AQ9HD42 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.17□□□□□ -2.76
CHMP1AQ9HD42 AL451105.1-201ENST00000450005 189 ntBASIC-2.17□□□□□ -2.76
CHMP1AQ9HD42 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.18□□□□□ -2.76
CHMP1AQ9HD42 SNORD60-201ENST00000383903 83 ntBASIC-2.19□□□□□ -2.76
CHMP1AQ9HD42 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.19□□□□□ -2.76
CHMP1AQ9HD42 RNU6-530P-201ENST00000391180 107 ntBASIC-2.19□□□□□ -2.76
CHMP1AQ9HD42 SNORD45.2-201ENST00000363552 72 ntBASIC-2.2□□□□□ -2.76
CHMP1AQ9HD42 RNU6-361P-201ENST00000364454 107 ntBASIC-2.2□□□□□ -2.76
CHMP1AQ9HD42 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.2□□□□□ -2.76
CHMP1AQ9HD42 SNORA72.7-201ENST00000516349 94 ntBASIC-2.21□□□□□ -2.76
CHMP1AQ9HD42 MIR581-201ENST00000384895 96 ntBASIC-2.22□□□□□ -2.76
CHMP1AQ9HD42 MIR487B-201ENST00000385021 84 ntBASIC-2.22□□□□□ -2.76
CHMP1AQ9HD42 SNORA17.4-201ENST00000391287 132 ntBASIC-2.22□□□□□ -2.76
CHMP1AQ9HD42 SNORD18C-201ENST00000362704 69 ntBASIC-2.23□□□□□ -2.77
CHMP1AQ9HD42 RNU6-841P-201ENST00000383872 107 ntBASIC-2.23□□□□□ -2.77
CHMP1AQ9HD42 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.23□□□□□ -2.77
CHMP1AQ9HD42 MIR548N-201ENST00000408742 75 ntBASIC-2.23□□□□□ -2.77
CHMP1AQ9HD42 RNU6-419P-201ENST00000517030 63 ntBASIC-2.23□□□□□ -2.77
CHMP1AQ9HD42 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.23□□□□□ -2.77
CHMP1AQ9HD42 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.24□□□□□ -2.77
CHMP1AQ9HD42 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.24□□□□□ -2.77
CHMP1AQ9HD42 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms