Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RNU6-995P-201ENST00000391244 107 ntBASIC-1.21□□□□□ -2.6
NXF3Q9H4D5 SNORD63.2-201ENST00000516303 64 ntBASIC-1.21□□□□□ -2.6
NXF3Q9H4D5 RNA5SP331-201ENST00000364986 107 ntBASIC-1.22□□□□□ -2.6
NXF3Q9H4D5 RNU6-669P-201ENST00000365575 107 ntBASIC-1.22□□□□□ -2.6
NXF3Q9H4D5 SNORD30.1-201ENST00000391309 70 ntBASIC-1.22□□□□□ -2.6
NXF3Q9H4D5 MIR3115-201ENST00000577915 68 ntBASIC-1.22□□□□□ -2.6
NXF3Q9H4D5 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.23□□□□□ -2.61
NXF3Q9H4D5 RNU6-279P-201ENST00000391297 101 ntBASIC-1.23□□□□□ -2.61
NXF3Q9H4D5 MIR4520-1-201ENST00000582609 70 ntBASIC-1.23□□□□□ -2.61
NXF3Q9H4D5 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.24□□□□□ -2.61
NXF3Q9H4D5 AC120024.2-201ENST00000576526 175 ntBASIC-1.24□□□□□ -2.61
NXF3Q9H4D5 MIR3165-201ENST00000579874 75 ntBASIC-1.24□□□□□ -2.61
NXF3Q9H4D5 MIR6502-201ENST00000617296 76 ntBASIC-1.24□□□□□ -2.61
NXF3Q9H4D5 SNORD78.1-201ENST00000390866 65 ntBASIC-1.25□□□□□ -2.61
NXF3Q9H4D5 MIR4679-1-201ENST00000637619 75 ntBASIC-1.25□□□□□ -2.61
NXF3Q9H4D5 RNU6-79P-201ENST00000362511 107 ntBASIC-1.26□□□□□ -2.61
NXF3Q9H4D5 RNU6-810P-201ENST00000364001 107 ntBASIC-1.26□□□□□ -2.61
NXF3Q9H4D5 MIR125B1-201ENST00000385236 88 ntBASIC-1.26□□□□□ -2.61
NXF3Q9H4D5 SNX3P1X-201ENST00000414887 175 ntBASIC-1.26□□□□□ -2.61
NXF3Q9H4D5 RNU6-706P-201ENST00000517229 104 ntBASIC-1.26□□□□□ -2.61
NXF3Q9H4D5 MIR23C-201ENST00000579846 100 ntBASIC-1.26□□□□□ -2.61
NXF3Q9H4D5 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.27□□□□□ -2.61
NXF3Q9H4D5 SNORA25.4-201ENST00000363666 124 ntBASIC-1.27□□□□□ -2.61
NXF3Q9H4D5 SNORD116.2-201ENST00000391251 93 ntBASIC-1.27□□□□□ -2.61
NXF3Q9H4D5 RNU6-231P-201ENST00000517122 103 ntBASIC-1.27□□□□□ -2.61
NXF3Q9H4D5 AC005520.4-201ENST00000604337 90 ntBASIC-1.27□□□□□ -2.61
NXF3Q9H4D5 SNORA25.5-201ENST00000363782 126 ntBASIC-1.28□□□□□ -2.61
NXF3Q9H4D5 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.61
NXF3Q9H4D5 AC138207.3-201ENST00000585289 166 ntBASIC-1.28□□□□□ -2.61
NXF3Q9H4D5 MIR7110-201ENST00000612638 86 ntBASIC-1.28□□□□□ -2.61
NXF3Q9H4D5 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.3□□□□□ -2.62
NXF3Q9H4D5 RNU6-649P-201ENST00000384463 107 ntBASIC-1.3□□□□□ -2.62
NXF3Q9H4D5 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.3□□□□□ -2.62
NXF3Q9H4D5 RNY3P8-201ENST00000411366 126 ntBASIC-1.3□□□□□ -2.62
NXF3Q9H4D5 AC013734.1-201ENST00000619329 111 ntBASIC-1.3□□□□□ -2.62
NXF3Q9H4D5 U6.111-201ENST00000636093 83 ntBASIC-1.3□□□□□ -2.62
NXF3Q9H4D5 RNA5SP461-201ENST00000516451 104 ntBASIC-1.31□□□□□ -2.62
NXF3Q9H4D5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.31□□□□□ -2.62
NXF3Q9H4D5 MIR4320-201ENST00000636981 65 ntBASIC-1.31□□□□□ -2.62
NXF3Q9H4D5 SNORA27.2-201ENST00000363365 126 ntBASIC-1.32□□□□□ -2.62
NXF3Q9H4D5 HLA-S-202ENST00000425174 53 ntBASIC-1.32□□□□□ -2.62
NXF3Q9H4D5 RNU6-871P-201ENST00000516122 100 ntBASIC-1.32□□□□□ -2.62
NXF3Q9H4D5 RNU6-122P-201ENST00000516818 107 ntBASIC-1.32□□□□□ -2.62
NXF3Q9H4D5 MIR5591-201ENST00000578248 65 ntBASIC-1.32□□□□□ -2.62
NXF3Q9H4D5 RNU6-400P-201ENST00000391173 106 ntBASIC-1.33□□□□□ -2.62
NXF3Q9H4D5 U6.97-201ENST00000636904 101 ntBASIC-1.33□□□□□ -2.62
NXF3Q9H4D5 MIR4511-201ENST00000582784 87 ntBASIC-1.34□□□□□ -2.62
NXF3Q9H4D5 MIR1302-4-201ENST00000408701 150 ntBASIC-1.36□□□□□ -2.63
NXF3Q9H4D5 MIR1468-201ENST00000410600 86 ntBASIC-1.36□□□□□ -2.63
NXF3Q9H4D5 RNU7-160P-201ENST00000516660 62 ntBASIC-1.36□□□□□ -2.63
NXF3Q9H4D5 SNORA40.16-201ENST00000517238 121 ntBASIC-1.36□□□□□ -2.63
NXF3Q9H4D5 RNU6-776P-201ENST00000364403 104 ntBASIC-1.37□□□□□ -2.63
NXF3Q9H4D5 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.37□□□□□ -2.63
NXF3Q9H4D5 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.37□□□□□ -2.63
NXF3Q9H4D5 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.37□□□□□ -2.63
NXF3Q9H4D5 RNU6-539P-201ENST00000516665 103 ntBASIC-1.37□□□□□ -2.63
NXF3Q9H4D5 RNU6-828P-201ENST00000364876 107 ntBASIC-1.38□□□□□ -2.63
NXF3Q9H4D5 RNU6-800P-201ENST00000384473 103 ntBASIC-1.38□□□□□ -2.63
NXF3Q9H4D5 SNORA40B-201ENST00000385573 128 ntBASIC-1.38□□□□□ -2.63
NXF3Q9H4D5 MIR487B-201ENST00000385021 84 ntBASIC-1.39□□□□□ -2.63
NXF3Q9H4D5 RNU6-695P-201ENST00000391157 104 ntBASIC-1.39□□□□□ -2.63
NXF3Q9H4D5 RNU6-520P-201ENST00000384717 104 ntBASIC-1.4□□□□□ -2.63
NXF3Q9H4D5 RNA5SP86-201ENST00000390869 98 ntBASIC-1.4□□□□□ -2.63
NXF3Q9H4D5 RNU6-226P-201ENST00000363778 107 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 MIR4770-201ENST00000579149 58 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 AC103706.3-201ENST00000636297 85 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.41□□□□□ -2.64
NXF3Q9H4D5 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.42□□□□□ -2.64
NXF3Q9H4D5 MIR466-201ENST00000580653 84 ntBASIC-1.42□□□□□ -2.64
NXF3Q9H4D5 MIR202-201ENST00000362219 110 ntBASIC-1.43□□□□□ -2.64
NXF3Q9H4D5 MIR548H1-201ENST00000408610 102 ntBASIC-1.43□□□□□ -2.64
NXF3Q9H4D5 MIR4662A-201ENST00000637499 67 ntBASIC-1.43□□□□□ -2.64
NXF3Q9H4D5 RNU6-940P-201ENST00000363433 104 ntBASIC-1.44□□□□□ -2.64
NXF3Q9H4D5 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.44□□□□□ -2.64
NXF3Q9H4D5 MIR601-201ENST00000385256 79 ntBASIC-1.44□□□□□ -2.64
NXF3Q9H4D5 MIR3123-201ENST00000583417 75 ntBASIC-1.44□□□□□ -2.64
NXF3Q9H4D5 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.45□□□□□ -2.64
NXF3Q9H4D5 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
NXF3Q9H4D5 RNU7-119P-201ENST00000459279 63 ntBASIC-1.45□□□□□ -2.64
NXF3Q9H4D5 MIR3938-201ENST00000582157 103 ntBASIC-1.45□□□□□ -2.64
NXF3Q9H4D5 MIR581-201ENST00000384895 96 ntBASIC-1.46□□□□□ -2.64
NXF3Q9H4D5 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.47□□□□□ -2.64
NXF3Q9H4D5 RNU6-530P-201ENST00000391180 107 ntBASIC-1.47□□□□□ -2.64
NXF3Q9H4D5 AC110620.1-201ENST00000416042 228 ntBASIC-1.47□□□□□ -2.64
NXF3Q9H4D5 MIR198-201ENST00000637333 62 ntBASIC-1.47□□□□□ -2.64
NXF3Q9H4D5 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.48□□□□□ -2.65
NXF3Q9H4D5 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.48□□□□□ -2.65
NXF3Q9H4D5 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.48□□□□□ -2.65
NXF3Q9H4D5 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.5□□□□□ -2.65
NXF3Q9H4D5 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.5□□□□□ -2.65
NXF3Q9H4D5 AL451105.1-201ENST00000450005 189 ntBASIC-1.51□□□□□ -2.65
NXF3Q9H4D5 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.52□□□□□ -2.65
NXF3Q9H4D5 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.52□□□□□ -2.65
NXF3Q9H4D5 MIR1285-2-201ENST00000408311 88 ntBASIC-1.52□□□□□ -2.65
NXF3Q9H4D5 AC114801.3-201ENST00000510231 177 ntBASIC-1.52□□□□□ -2.65
NXF3Q9H4D5 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.52□□□□□ -2.65
NXF3Q9H4D5 SNORA17.4-201ENST00000391287 132 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms