Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.58□□□□□ -2.66
NR1H4Q96RI1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.59□□□□□ -2.66
NR1H4Q96RI1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.59□□□□□ -2.66
NR1H4Q96RI1 SNORD73B-201ENST00000364394 72 ntBASIC-1.59□□□□□ -2.66
NR1H4Q96RI1 RNU6-687P-201ENST00000516443 89 ntBASIC-1.59□□□□□ -2.66
NR1H4Q96RI1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.6□□□□□ -2.67
NR1H4Q96RI1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.6□□□□□ -2.67
NR1H4Q96RI1 SNORA26.2-201ENST00000390922 122 ntBASIC-1.6□□□□□ -2.67
NR1H4Q96RI1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.61□□□□□ -2.67
NR1H4Q96RI1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.61□□□□□ -2.67
NR1H4Q96RI1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.62□□□□□ -2.67
NR1H4Q96RI1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.62□□□□□ -2.67
NR1H4Q96RI1 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.62□□□□□ -2.67
NR1H4Q96RI1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.62□□□□□ -2.67
NR1H4Q96RI1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.63□□□□□ -2.67
NR1H4Q96RI1 MIR664B-201ENST00000626756 61 ntBASIC-1.63□□□□□ -2.67
NR1H4Q96RI1 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.64□□□□□ -2.67
NR1H4Q96RI1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.64□□□□□ -2.67
NR1H4Q96RI1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.64□□□□□ -2.67
NR1H4Q96RI1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.66□□□□□ -2.68
NR1H4Q96RI1 RNY4P29-201ENST00000410801 97 ntBASIC-1.66□□□□□ -2.68
NR1H4Q96RI1 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.66□□□□□ -2.68
NR1H4Q96RI1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.66□□□□□ -2.68
NR1H4Q96RI1 RNY4P27-201ENST00000363341 96 ntBASIC-1.67□□□□□ -2.68
NR1H4Q96RI1 MIR3139-201ENST00000579145 76 ntBASIC-1.67□□□□□ -2.68
NR1H4Q96RI1 U2.18-201ENST00000622185 84 ntBASIC-1.67□□□□□ -2.68
NR1H4Q96RI1 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.68□□□□□ -2.68
NR1H4Q96RI1 SNORA41B-201ENST00000384785 128 ntBASIC-1.68□□□□□ -2.68
NR1H4Q96RI1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.68□□□□□ -2.68
NR1H4Q96RI1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.68□□□□□ -2.68
NR1H4Q96RI1 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.69□□□□□ -2.68
NR1H4Q96RI1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.69□□□□□ -2.68
NR1H4Q96RI1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.69□□□□□ -2.68
NR1H4Q96RI1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.69□□□□□ -2.68
NR1H4Q96RI1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.69□□□□□ -2.68
NR1H4Q96RI1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.7□□□□□ -2.68
NR1H4Q96RI1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.7□□□□□ -2.68
NR1H4Q96RI1 MIR1207-201ENST00000408249 87 ntBASIC-1.7□□□□□ -2.68
NR1H4Q96RI1 AC018880.2-201ENST00000414265 201 ntBASIC-1.7□□□□□ -2.68
NR1H4Q96RI1 RNU6-634P-201ENST00000459134 106 ntBASIC-1.7□□□□□ -2.68
NR1H4Q96RI1 RNU6-573P-201ENST00000383938 106 ntBASIC-1.71□□□□□ -2.68
NR1H4Q96RI1 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.71□□□□□ -2.68
NR1H4Q96RI1 MIR496-201ENST00000385226 102 ntBASIC-1.71□□□□□ -2.68
NR1H4Q96RI1 RNU6-608P-201ENST00000383927 104 ntBASIC-1.72□□□□□ -2.68
NR1H4Q96RI1 RNU6-871P-201ENST00000516122 100 ntBASIC-1.72□□□□□ -2.68
NR1H4Q96RI1 MIR3123-201ENST00000583417 75 ntBASIC-1.72□□□□□ -2.68
NR1H4Q96RI1 RNU6-92P-201ENST00000605893 104 ntBASIC-1.72□□□□□ -2.68
NR1H4Q96RI1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 SNORD1B-201ENST00000363091 84 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 RNU6-663P-201ENST00000391105 106 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 MIR548AM-201ENST00000584298 74 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.73□□□□□ -2.69
NR1H4Q96RI1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.74□□□□□ -2.69
NR1H4Q96RI1 MIR520D-201ENST00000385002 87 ntBASIC-1.74□□□□□ -2.69
NR1H4Q96RI1 RNU6-857P-201ENST00000515893 110 ntBASIC-1.74□□□□□ -2.69
NR1H4Q96RI1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.75□□□□□ -2.69
NR1H4Q96RI1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.75□□□□□ -2.69
NR1H4Q96RI1 MIR1255A-201ENST00000408338 113 ntBASIC-1.75□□□□□ -2.69
NR1H4Q96RI1 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.76□□□□□ -2.69
NR1H4Q96RI1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.76□□□□□ -2.69
NR1H4Q96RI1 RNU6-279P-201ENST00000391297 101 ntBASIC-1.76□□□□□ -2.69
NR1H4Q96RI1 MT-TM-201ENST00000387377 68 ntBASIC-1.77□□□□□ -2.69
NR1H4Q96RI1 MIR1302-4-201ENST00000408701 150 ntBASIC-1.77□□□□□ -2.69
NR1H4Q96RI1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.78□□□□□ -2.69
NR1H4Q96RI1 MIR23C-201ENST00000579846 100 ntBASIC-1.78□□□□□ -2.69
NR1H4Q96RI1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.79□□□□□ -2.7
NR1H4Q96RI1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
NR1H4Q96RI1 SNORD30.1-201ENST00000391309 70 ntBASIC-1.79□□□□□ -2.7
NR1H4Q96RI1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.79□□□□□ -2.7
NR1H4Q96RI1 MIR3170-201ENST00000582699 77 ntBASIC-1.79□□□□□ -2.7
NR1H4Q96RI1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.79□□□□□ -2.7
NR1H4Q96RI1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.8□□□□□ -2.7
NR1H4Q96RI1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.8□□□□□ -2.7
NR1H4Q96RI1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.8□□□□□ -2.7
NR1H4Q96RI1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.81□□□□□ -2.7
NR1H4Q96RI1 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.81□□□□□ -2.7
NR1H4Q96RI1 AC120024.2-201ENST00000576526 175 ntBASIC-1.81□□□□□ -2.7
NR1H4Q96RI1 SNORA25.4-201ENST00000363666 124 ntBASIC-1.82□□□□□ -2.7
NR1H4Q96RI1 SNORD78.1-201ENST00000390866 65 ntBASIC-1.83□□□□□ -2.7
NR1H4Q96RI1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.83□□□□□ -2.7
NR1H4Q96RI1 MIR548W-201ENST00000581970 74 ntBASIC-1.83□□□□□ -2.7
NR1H4Q96RI1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.84□□□□□ -2.7
NR1H4Q96RI1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.84□□□□□ -2.7
NR1H4Q96RI1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.86□□□□□ -2.71
NR1H4Q96RI1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.87□□□□□ -2.71
NR1H4Q96RI1 RNU6-649P-201ENST00000384463 107 ntBASIC-1.87□□□□□ -2.71
NR1H4Q96RI1 snoU13.10-201ENST00000459301 103 ntBASIC-1.87□□□□□ -2.71
NR1H4Q96RI1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.87□□□□□ -2.71
NR1H4Q96RI1 SNORD60.1-201ENST00000362451 73 ntBASIC-1.88□□□□□ -2.71
NR1H4Q96RI1 MIR579-201ENST00000385221 98 ntBASIC-1.88□□□□□ -2.71
NR1H4Q96RI1 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
NR1H4Q96RI1 RNA5SP93-201ENST00000362525 114 ntBASIC-1.9□□□□□ -2.71
NR1H4Q96RI1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
NR1H4Q96RI1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.91□□□□□ -2.72
NR1H4Q96RI1 RNU6-539P-201ENST00000516665 103 ntBASIC-1.91□□□□□ -2.72
NR1H4Q96RI1 MIR4679-1-201ENST00000637619 75 ntBASIC-1.91□□□□□ -2.72
NR1H4Q96RI1 SNORA25.5-201ENST00000363782 126 ntBASIC-1.92□□□□□ -2.72
NR1H4Q96RI1 RNA5SP225-201ENST00000410874 135 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms