Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AP001318.4-201ENST00000616637 121 ntBASIC-4.33□□□□□ -3.1
CCDC42Q96M95 RNU6-267P-201ENST00000516714 103 ntBASIC-4.34□□□□□ -3.1
CCDC42Q96M95 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.35□□□□□ -3.11
CCDC42Q96M95 RNU6-388P-201ENST00000517012 105 ntBASIC-4.35□□□□□ -3.11
CCDC42Q96M95 RNU6-389P-201ENST00000517048 105 ntBASIC-4.35□□□□□ -3.11
CCDC42Q96M95 SNORD113-3-201ENST00000364830 72 ntBASIC-4.36□□□□□ -3.11
CCDC42Q96M95 RNU6-867P-201ENST00000364956 107 ntBASIC-4.36□□□□□ -3.11
CCDC42Q96M95 RNU6-1324P-201ENST00000384222 107 ntBASIC-4.36□□□□□ -3.11
CCDC42Q96M95 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-4.36□□□□□ -3.11
CCDC42Q96M95 MIR379-201ENST00000362218 67 ntBASIC-4.37□□□□□ -3.11
CCDC42Q96M95 RNU6-1079P-201ENST00000362861 110 ntBASIC-4.37□□□□□ -3.11
CCDC42Q96M95 MIR7110-201ENST00000612638 86 ntBASIC-4.37□□□□□ -3.11
CCDC42Q96M95 RNU6-694P-201ENST00000364071 147 ntBASIC-4.38□□□□□ -3.11
CCDC42Q96M95 Y_RNA.611-201ENST00000410682 108 ntBASIC-4.38□□□□□ -3.11
CCDC42Q96M95 MIR664A-201ENST00000626086 82 ntBASIC-4.38□□□□□ -3.11
CCDC42Q96M95 RNU6-327P-201ENST00000516270 127 ntBASIC-4.39□□□□□ -3.11
CCDC42Q96M95 MIRLET7A2-201ENST00000362105 72 ntBASIC-4.4□□□□□ -3.11
CCDC42Q96M95 RNU6-834P-201ENST00000362367 110 ntBASIC-4.4□□□□□ -3.11
CCDC42Q96M95 RNY1P5-201ENST00000383890 115 ntBASIC-4.41□□□□□ -3.12
CCDC42Q96M95 RNU6-346P-201ENST00000516288 111 ntBASIC-4.41□□□□□ -3.12
CCDC42Q96M95 RNU6-92P-201ENST00000605893 104 ntBASIC-4.41□□□□□ -3.12
CCDC42Q96M95 SNORD116-24-201ENST00000384549 92 ntBASIC-4.42□□□□□ -3.12
CCDC42Q96M95 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.44□□□□□ -3.12
CCDC42Q96M95 AC006160.2-201ENST00000637708 154 ntBASIC-4.44□□□□□ -3.12
CCDC42Q96M95 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.44□□□□□ -3.12
CCDC42Q96M95 RNU6-810P-201ENST00000364001 107 ntBASIC-4.45□□□□□ -3.12
CCDC42Q96M95 RNU6-542P-201ENST00000516405 103 ntBASIC-4.45□□□□□ -3.12
CCDC42Q96M95 RNU6-912P-201ENST00000363800 104 ntBASIC-4.46□□□□□ -3.12
CCDC42Q96M95 RNU6-895P-201ENST00000384125 103 ntBASIC-4.46□□□□□ -3.12
CCDC42Q96M95 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.46□□□□□ -3.12
CCDC42Q96M95 RNU6-315P-201ENST00000362666 107 ntBASIC-4.47□□□□□ -3.13
CCDC42Q96M95 RNU6-1241P-201ENST00000384536 107 ntBASIC-4.47□□□□□ -3.13
CCDC42Q96M95 RNU6-907P-201ENST00000390924 102 ntBASIC-4.47□□□□□ -3.13
CCDC42Q96M95 AL117351.2-201ENST00000513571 157 ntBASIC-4.47□□□□□ -3.13
CCDC42Q96M95 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.47□□□□□ -3.13
CCDC42Q96M95 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-4.47□□□□□ -3.13
CCDC42Q96M95 Y_RNA.129-201ENST00000363392 110 ntBASIC-4.48□□□□□ -3.13
CCDC42Q96M95 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.48□□□□□ -3.13
CCDC42Q96M95 RNU6-530P-201ENST00000391180 107 ntBASIC-4.48□□□□□ -3.13
CCDC42Q96M95 MIR548AI-201ENST00000579940 88 ntBASIC-4.48□□□□□ -3.13
CCDC42Q96M95 RNU6-231P-201ENST00000517122 103 ntBASIC-4.49□□□□□ -3.13
CCDC42Q96M95 MALAT1.1-201ENST00000618249 95 ntBASIC-4.49□□□□□ -3.13
CCDC42Q96M95 RNU6-68P-201ENST00000516576 104 ntBASIC-4.5□□□□□ -3.13
CCDC42Q96M95 RNU6-1045P-201ENST00000516321 107 ntBASIC-4.51□□□□□ -3.13
CCDC42Q96M95 RNU6-463P-201ENST00000384340 107 ntBASIC-4.52□□□□□ -3.13
CCDC42Q96M95 MIR154-201ENST00000385243 84 ntBASIC-4.52□□□□□ -3.13
CCDC42Q96M95 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.52□□□□□ -3.13
CCDC42Q96M95 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.52□□□□□ -3.13
CCDC42Q96M95 SNORD45.2-201ENST00000363552 72 ntBASIC-4.53□□□□□ -3.13
CCDC42Q96M95 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.53□□□□□ -3.13
CCDC42Q96M95 MT-TG-201ENST00000387429 68 ntBASIC-4.53□□□□□ -3.13
CCDC42Q96M95 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.53□□□□□ -3.13
CCDC42Q96M95 SNORD60.1-201ENST00000362451 73 ntBASIC-4.54□□□□□ -3.14
CCDC42Q96M95 SNORD116.2-201ENST00000391251 93 ntBASIC-4.54□□□□□ -3.14
CCDC42Q96M95 RNU6-176P-201ENST00000517196 105 ntBASIC-4.54□□□□□ -3.14
CCDC42Q96M95 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.55□□□□□ -3.14
CCDC42Q96M95 RNU6-675P-201ENST00000384236 104 ntBASIC-4.55□□□□□ -3.14
CCDC42Q96M95 Y_RNA.658-201ENST00000515990 97 ntBASIC-4.55□□□□□ -3.14
CCDC42Q96M95 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.55□□□□□ -3.14
CCDC42Q96M95 MIR4426-201ENST00000640330 63 ntBASIC-4.55□□□□□ -3.14
CCDC42Q96M95 Y_RNA.59-201ENST00000362828 102 ntBASIC-4.56□□□□□ -3.14
CCDC42Q96M95 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.56□□□□□ -3.14
CCDC42Q96M95 SNORA40B-201ENST00000385573 128 ntBASIC-4.57□□□□□ -3.14
CCDC42Q96M95 RNU6-590P-201ENST00000365039 107 ntBASIC-4.59□□□□□ -3.14
CCDC42Q96M95 RNU6-300P-201ENST00000459080 104 ntBASIC-4.59□□□□□ -3.14
CCDC42Q96M95 SNORA40.13-201ENST00000516379 120 ntBASIC-4.6□□□□□ -3.15
CCDC42Q96M95 RNU6-70P-201ENST00000516438 60 ntBASIC-4.6□□□□□ -3.15
CCDC42Q96M95 RNU6-589P-201ENST00000516485 107 ntBASIC-4.6□□□□□ -3.15
CCDC42Q96M95 RNU6-255P-201ENST00000516957 105 ntBASIC-4.6□□□□□ -3.15
CCDC42Q96M95 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.61□□□□□ -3.15
CCDC42Q96M95 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.61□□□□□ -3.15
CCDC42Q96M95 RNU6-803P-201ENST00000516034 102 ntBASIC-4.61□□□□□ -3.15
CCDC42Q96M95 AL451105.1-201ENST00000450005 189 ntBASIC-4.63□□□□□ -3.15
CCDC42Q96M95 AL031737.1-201ENST00000450125 223 ntBASIC-4.64□□□□□ -3.15
CCDC42Q96M95 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-4.65□□□□□ -3.15
CCDC42Q96M95 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.66□□□□□ -3.16
CCDC42Q96M95 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.69□□□□□ -3.16
CCDC42Q96M95 RNU6-844P-201ENST00000517175 102 ntBASIC-4.7□□□□□ -3.16
CCDC42Q96M95 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.71□□□□□ -3.16
CCDC42Q96M95 SNORA40.16-201ENST00000517238 121 ntBASIC-4.71□□□□□ -3.16
CCDC42Q96M95 MIR450A1-201ENST00000362262 91 ntBASIC-4.72□□□□□ -3.17
CCDC42Q96M95 Y_RNA.566-201ENST00000384735 101 ntBASIC-4.72□□□□□ -3.17
CCDC42Q96M95 MIR1254-1-201ENST00000408257 97 ntBASIC-4.72□□□□□ -3.17
CCDC42Q96M95 RNU6-1121P-201ENST00000516802 109 ntBASIC-4.72□□□□□ -3.17
CCDC42Q96M95 MIR5693-201ENST00000577722 73 ntBASIC-4.72□□□□□ -3.17
CCDC42Q96M95 AC008267.6-201ENST00000441664 139 ntBASIC-4.73□□□□□ -3.17
CCDC42Q96M95 RNU6-345P-201ENST00000517001 107 ntBASIC-4.73□□□□□ -3.17
CCDC42Q96M95 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.74□□□□□ -3.17
CCDC42Q96M95 RNY4P25-201ENST00000459254 96 ntBASIC-4.74□□□□□ -3.17
CCDC42Q96M95 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.75□□□□□ -3.17
CCDC42Q96M95 RNU7-119P-201ENST00000459279 63 ntBASIC-4.75□□□□□ -3.17
CCDC42Q96M95 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.76□□□□□ -3.17
CCDC42Q96M95 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.77□□□□□ -3.17
CCDC42Q96M95 RNU6-122P-201ENST00000516818 107 ntBASIC-4.78□□□□□ -3.17
CCDC42Q96M95 AL731768.1-201ENST00000603124 139 ntBASIC-4.78□□□□□ -3.17
CCDC42Q96M95 MIR488-201ENST00000365739 83 ntBASIC-4.79□□□□□ -3.18
CCDC42Q96M95 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.79□□□□□ -3.18
CCDC42Q96M95 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.79□□□□□ -3.18
CCDC42Q96M95 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.8□□□□□ -3.18
CCDC42Q96M95 RNU6-687P-201ENST00000516443 89 ntBASIC-4.81□□□□□ -3.18
Retrieved 100 of 98,524 protein–RNA pairs in 300.5 ms