Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.57□□□□□ -2.82
SKA1Q96BD8 MIR450A2-201ENST00000385022 100 ntBASIC-2.58□□□□□ -2.82
SKA1Q96BD8 RNU6-608P-201ENST00000383927 104 ntBASIC-2.59□□□□□ -2.82
SKA1Q96BD8 MIR494-201ENST00000349529 81 ntBASIC-2.6□□□□□ -2.83
SKA1Q96BD8 U2.22-201ENST00000636441 106 ntBASIC-2.61□□□□□ -2.83
SKA1Q96BD8 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.62□□□□□ -2.83
SKA1Q96BD8 SNORA41B-201ENST00000384785 128 ntBASIC-2.62□□□□□ -2.83
SKA1Q96BD8 RNU6-995P-201ENST00000391244 107 ntBASIC-2.62□□□□□ -2.83
SKA1Q96BD8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.62□□□□□ -2.83
SKA1Q96BD8 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.63□□□□□ -2.83
SKA1Q96BD8 RNU6-153P-201ENST00000364422 104 ntBASIC-2.63□□□□□ -2.83
SKA1Q96BD8 MIR520D-201ENST00000385002 87 ntBASIC-2.63□□□□□ -2.83
SKA1Q96BD8 RNU6-980P-201ENST00000516925 103 ntBASIC-2.63□□□□□ -2.83
SKA1Q96BD8 RNU6-247P-201ENST00000362636 107 ntBASIC-2.64□□□□□ -2.83
SKA1Q96BD8 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.64□□□□□ -2.83
SKA1Q96BD8 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.64□□□□□ -2.83
SKA1Q96BD8 MIR3170-201ENST00000582699 77 ntBASIC-2.64□□□□□ -2.83
SKA1Q96BD8 MIR3139-201ENST00000579145 76 ntBASIC-2.65□□□□□ -2.83
SKA1Q96BD8 SNORD1B-201ENST00000363091 84 ntBASIC-2.66□□□□□ -2.84
SKA1Q96BD8 RNU6-294P-201ENST00000364999 102 ntBASIC-2.66□□□□□ -2.84
SKA1Q96BD8 SNORD116-24-201ENST00000384549 92 ntBASIC-2.67□□□□□ -2.84
SKA1Q96BD8 RNU6-695P-201ENST00000391157 104 ntBASIC-2.67□□□□□ -2.84
SKA1Q96BD8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.67□□□□□ -2.84
SKA1Q96BD8 MIR4666B-201ENST00000578142 81 ntBASIC-2.67□□□□□ -2.84
SKA1Q96BD8 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.68□□□□□ -2.84
SKA1Q96BD8 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.68□□□□□ -2.84
SKA1Q96BD8 RNU6-542P-201ENST00000516405 103 ntBASIC-2.7□□□□□ -2.84
SKA1Q96BD8 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.7□□□□□ -2.84
SKA1Q96BD8 RNA5SP405-201ENST00000363059 114 ntBASIC-2.71□□□□□ -2.84
SKA1Q96BD8 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.71□□□□□ -2.84
SKA1Q96BD8 RNY4P7-201ENST00000364600 96 ntBASIC-2.72□□□□□ -2.84
SKA1Q96BD8 MT-TM-201ENST00000387377 68 ntBASIC-2.73□□□□□ -2.85
SKA1Q96BD8 MIR3134-201ENST00000579433 74 ntBASIC-2.73□□□□□ -2.85
SKA1Q96BD8 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.73□□□□□ -2.85
SKA1Q96BD8 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.73□□□□□ -2.85
SKA1Q96BD8 SNORD115-31-201ENST00000365318 82 ntBASIC-2.74□□□□□ -2.85
SKA1Q96BD8 RNU6-841P-201ENST00000383872 107 ntBASIC-2.74□□□□□ -2.85
SKA1Q96BD8 RNU6-820P-201ENST00000384273 107 ntBASIC-2.74□□□□□ -2.85
SKA1Q96BD8 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.75□□□□□ -2.85
SKA1Q96BD8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.75□□□□□ -2.85
SKA1Q96BD8 RNU6-411P-201ENST00000384451 107 ntBASIC-2.76□□□□□ -2.85
SKA1Q96BD8 RNU6-687P-201ENST00000516443 89 ntBASIC-2.76□□□□□ -2.85
SKA1Q96BD8 RNU6-194P-201ENST00000363862 105 ntBASIC-2.77□□□□□ -2.85
SKA1Q96BD8 RNU6-172P-201ENST00000411000 93 ntBASIC-2.77□□□□□ -2.85
SKA1Q96BD8 RNU7-151P-201ENST00000516930 53 ntBASIC-2.77□□□□□ -2.85
SKA1Q96BD8 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.77□□□□□ -2.85
SKA1Q96BD8 MIR3123-201ENST00000583417 75 ntBASIC-2.78□□□□□ -2.85
SKA1Q96BD8 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.79□□□□□ -2.86
SKA1Q96BD8 SNORD54-201ENST00000459159 67 ntBASIC-2.79□□□□□ -2.86
SKA1Q96BD8 RNU6-92P-201ENST00000605893 104 ntBASIC-2.79□□□□□ -2.86
SKA1Q96BD8 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.8□□□□□ -2.86
SKA1Q96BD8 MIR548AM-201ENST00000584298 74 ntBASIC-2.8□□□□□ -2.86
SKA1Q96BD8 U7.4-201ENST00000614961 63 ntBASIC-2.82□□□□□ -2.86
SKA1Q96BD8 AC120024.2-201ENST00000576526 175 ntBASIC-2.83□□□□□ -2.86
SKA1Q96BD8 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.84□□□□□ -2.86
SKA1Q96BD8 MIR5582-201ENST00000579697 68 ntBASIC-2.84□□□□□ -2.86
SKA1Q96BD8 SNORA27.2-201ENST00000363365 126 ntBASIC-2.85□□□□□ -2.87
SKA1Q96BD8 MIR579-201ENST00000385221 98 ntBASIC-2.85□□□□□ -2.87
SKA1Q96BD8 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.85□□□□□ -2.87
SKA1Q96BD8 SNORD63.2-201ENST00000516303 64 ntBASIC-2.86□□□□□ -2.87
SKA1Q96BD8 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.87□□□□□ -2.87
SKA1Q96BD8 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.87□□□□□ -2.87
SKA1Q96BD8 RNU4-88P-201ENST00000411220 86 ntBASIC-2.88□□□□□ -2.87
SKA1Q96BD8 MIR7978-201ENST00000636158 59 ntBASIC-2.88□□□□□ -2.87
SKA1Q96BD8 RNA5SP93-201ENST00000362525 114 ntBASIC-2.89□□□□□ -2.87
SKA1Q96BD8 RNU6-669P-201ENST00000365575 107 ntBASIC-2.89□□□□□ -2.87
SKA1Q96BD8 RNU6-787P-201ENST00000384032 107 ntBASIC-2.89□□□□□ -2.87
SKA1Q96BD8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.89□□□□□ -2.87
SKA1Q96BD8 RNU6-563P-201ENST00000364872 108 ntBASIC-2.9□□□□□ -2.87
SKA1Q96BD8 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.9□□□□□ -2.87
SKA1Q96BD8 RNU6-258P-201ENST00000390884 101 ntBASIC-2.9□□□□□ -2.87
SKA1Q96BD8 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.9□□□□□ -2.87
SKA1Q96BD8 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.9□□□□□ -2.87
SKA1Q96BD8 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.9□□□□□ -2.87
SKA1Q96BD8 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.92□□□□□ -2.88
SKA1Q96BD8 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.93□□□□□ -2.88
SKA1Q96BD8 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.93□□□□□ -2.88
SKA1Q96BD8 RNU7-160P-201ENST00000516660 62 ntBASIC-2.93□□□□□ -2.88
SKA1Q96BD8 MIR125B1-201ENST00000385236 88 ntBASIC-2.94□□□□□ -2.88
SKA1Q96BD8 RNU6-634P-201ENST00000459134 106 ntBASIC-2.94□□□□□ -2.88
SKA1Q96BD8 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.95□□□□□ -2.88
SKA1Q96BD8 AC062037.1-201ENST00000605302 128 ntBASIC-2.95□□□□□ -2.88
SKA1Q96BD8 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.96□□□□□ -2.88
SKA1Q96BD8 RNU6-663P-201ENST00000391105 106 ntBASIC-2.96□□□□□ -2.88
SKA1Q96BD8 MIR7110-201ENST00000612638 86 ntBASIC-2.96□□□□□ -2.88
SKA1Q96BD8 SNORD60.1-201ENST00000362451 73 ntBASIC-2.97□□□□□ -2.88
SKA1Q96BD8 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.97□□□□□ -2.88
SKA1Q96BD8 RNU6-523P-201ENST00000516304 54 ntBASIC-2.98□□□□□ -2.89
SKA1Q96BD8 MIR3202-2-201ENST00000635980 79 ntBASIC-2.99□□□□□ -2.89
SKA1Q96BD8 Y_RNA.53-201ENST00000362765 102 ntBASIC-3.01□□□□□ -2.89
SKA1Q96BD8 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.03□□□□□ -2.89
SKA1Q96BD8 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.04□□□□□ -2.9
SKA1Q96BD8 RNU6-871P-201ENST00000516122 100 ntBASIC-3.04□□□□□ -2.9
SKA1Q96BD8 RNU6-828P-201ENST00000364876 107 ntBASIC-3.05□□□□□ -2.9
SKA1Q96BD8 RNU6-231P-201ENST00000517122 103 ntBASIC-3.05□□□□□ -2.9
SKA1Q96BD8 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.06□□□□□ -2.9
SKA1Q96BD8 SNORA25.4-201ENST00000363666 124 ntBASIC-3.06□□□□□ -2.9
SKA1Q96BD8 MIR466-201ENST00000580653 84 ntBASIC-3.07□□□□□ -2.9
SKA1Q96BD8 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.08□□□□□ -2.9
SKA1Q96BD8 SNORD30.1-201ENST00000391309 70 ntBASIC-3.08□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 1443.1 ms