Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-772P-201ENST00000516042 105 ntBASIC-5.02□□□□□ -3.21
VPS13CQ709C8 MIR590-201ENST00000385008 97 ntBASIC-5.02□□□□□ -3.21
VPS13CQ709C8 MTND4LP32-201ENST00000636111 270 ntBASIC-5.02□□□□□ -3.21
VPS13CQ709C8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-5.03□□□□□ -3.21
VPS13CQ709C8 MIR548BB-201ENST00000626714 66 ntBASIC-5.03□□□□□ -3.21
VPS13CQ709C8 MIR4679-1-201ENST00000637619 75 ntBASIC-5.03□□□□□ -3.22
VPS13CQ709C8 MIR1302-5-201ENST00000408164 150 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 RNU6-483P-201ENST00000384088 108 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 MTND5P22-201ENST00000458380 195 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 RNU6-219P-201ENST00000364728 107 ntBASIC-5.04□□□□□ -3.22
VPS13CQ709C8 SNORA25.4-201ENST00000363666 124 ntBASIC-5.05□□□□□ -3.22
VPS13CQ709C8 MIR3915-201ENST00000578518 97 ntBASIC-5.06□□□□□ -3.22
VPS13CQ709C8 SNORA19-201ENST00000384737 128 ntBASIC-5.06□□□□□ -3.22
VPS13CQ709C8 Y_RNA.276-201ENST00000364732 109 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RNU4-14P-201ENST00000410858 122 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RNU6-109P-201ENST00000516364 107 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RNU6-184P-201ENST00000516514 107 ntBASIC-5.07□□□□□ -3.22
VPS13CQ709C8 RN7SKP298-201ENST00000515950 94 ntBASIC-5.08□□□□□ -3.22
VPS13CQ709C8 MIR4511-201ENST00000582784 87 ntBASIC-5.08□□□□□ -3.22
VPS13CQ709C8 RNU7-197P-201ENST00000458836 62 ntBASIC-5.09□□□□□ -3.22
VPS13CQ709C8 Y_RNA.252-201ENST00000364556 101 ntBASIC-5.09□□□□□ -3.22
VPS13CQ709C8 AC114801.3-201ENST00000510231 177 ntBASIC-5.1□□□□□ -3.23
VPS13CQ709C8 AC113139.1-201ENST00000605049 239 ntBASIC-5.1□□□□□ -3.23
VPS13CQ709C8 RNU7-30P-201ENST00000516835 62 ntBASIC-5.1□□□□□ -3.23
VPS13CQ709C8 RNU6-918P-201ENST00000391219 106 ntBASIC-5.11□□□□□ -3.23
VPS13CQ709C8 RNU6-823P-201ENST00000391042 103 ntBASIC-5.11□□□□□ -3.23
VPS13CQ709C8 SNORA26.8-201ENST00000391306 124 ntBASIC-5.11□□□□□ -3.23
VPS13CQ709C8 RNU6-485P-201ENST00000363475 107 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 SNORD30.1-201ENST00000391309 70 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 Y_RNA.273-201ENST00000364703 102 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 Y_RNA.626-201ENST00000411288 95 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 Y_RNA.635-201ENST00000459041 101 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 SNORA81.3-201ENST00000517283 198 ntBASIC-5.12□□□□□ -3.23
VPS13CQ709C8 SNORD113-6-201ENST00000363345 75 ntBASIC-5.13□□□□□ -3.23
VPS13CQ709C8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-5.13□□□□□ -3.23
VPS13CQ709C8 SNORD116-29-201ENST00000384516 83 ntBASIC-5.13□□□□□ -3.23
VPS13CQ709C8 AC110620.1-201ENST00000416042 228 ntBASIC-5.14□□□□□ -3.23
VPS13CQ709C8 MIR3134-201ENST00000579433 74 ntBASIC-5.14□□□□□ -3.23
VPS13CQ709C8 MIR1252-201ENST00000408861 65 ntBASIC-5.14□□□□□ -3.23
VPS13CQ709C8 Y_RNA.89-201ENST00000363031 102 ntBASIC-5.15□□□□□ -3.23
VPS13CQ709C8 RNU5A-2P-201ENST00000384337 116 ntBASIC-5.15□□□□□ -3.23
VPS13CQ709C8 Y_RNA.645-201ENST00000391229 102 ntBASIC-5.16□□□□□ -3.24
VPS13CQ709C8 RNU6-675P-201ENST00000384236 104 ntBASIC-5.17□□□□□ -3.24
VPS13CQ709C8 Y_RNA.58-201ENST00000362807 102 ntBASIC-5.18□□□□□ -3.24
VPS13CQ709C8 MTND4P17-201ENST00000470444 350 ntBASIC-5.18□□□□□ -3.24
VPS13CQ709C8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-5.18□□□□□ -3.24
VPS13CQ709C8 RNU6-446P-201ENST00000362827 106 ntBASIC-5.19□□□□□ -3.24
VPS13CQ709C8 SNORD33.1-201ENST00000516213 88 ntBASIC-5.19□□□□□ -3.24
VPS13CQ709C8 U6.95-201ENST00000636931 70 ntBASIC-5.2□□□□□ -3.24
VPS13CQ709C8 Y_RNA.259-201ENST00000364619 101 ntBASIC-5.21□□□□□ -3.24
VPS13CQ709C8 RNU6-780P-201ENST00000391030 104 ntBASIC-5.21□□□□□ -3.24
VPS13CQ709C8 RNU7-152P-201ENST00000458982 64 ntBASIC-5.21□□□□□ -3.24
VPS13CQ709C8 MIR4509-3-201ENST00000578671 94 ntBASIC-5.22□□□□□ -3.24
VPS13CQ709C8 MIR4509-2-201ENST00000583920 94 ntBASIC-5.22□□□□□ -3.24
VPS13CQ709C8 MIR4509-1-201ENST00000618224 94 ntBASIC-5.22□□□□□ -3.24
VPS13CQ709C8 MIR3914-2-201ENST00000637339 95 ntBASIC-5.22□□□□□ -3.25
VPS13CQ709C8 Y_RNA.26-201ENST00000362539 101 ntBASIC-5.23□□□□□ -3.25
VPS13CQ709C8 Y_RNA.516-201ENST00000384541 124 ntBASIC-5.23□□□□□ -3.25
VPS13CQ709C8 DEFB108C-201ENST00000400154 252 ntBASIC-5.23□□□□□ -3.25
VPS13CQ709C8 SNORD113-4-201ENST00000364802 75 ntBASIC-5.24□□□□□ -3.25
VPS13CQ709C8 RNU6-232P-201ENST00000517144 64 ntBASIC-5.24□□□□□ -3.25
VPS13CQ709C8 AC044792.1-201ENST00000593294 196 ntBASIC-5.25□□□□□ -3.25
VPS13CQ709C8 MIR1245B-201ENST00000636115 69 ntBASIC-5.25□□□□□ -3.25
VPS13CQ709C8 SNORA40.13-201ENST00000516379 120 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 U7.4-201ENST00000614961 63 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 U6.103-201ENST00000637085 61 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 RNU6-133P-201ENST00000383989 107 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.26□□□□□ -3.25
VPS13CQ709C8 SNORD116-4-201ENST00000384733 96 ntBASIC-5.27□□□□□ -3.25
VPS13CQ709C8 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.28□□□□□ -3.25
VPS13CQ709C8 RNU7-125P-201ENST00000458760 62 ntBASIC-5.28□□□□□ -3.26
VPS13CQ709C8 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 Y_RNA.573-201ENST00000384763 105 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 RNU4-71P-201ENST00000516258 113 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 SNORD116-21-201ENST00000384507 92 ntBASIC-5.3□□□□□ -3.26
VPS13CQ709C8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-5.31□□□□□ -3.26
VPS13CQ709C8 RNU6-753P-201ENST00000363926 107 ntBASIC-5.31□□□□□ -3.26
VPS13CQ709C8 RNU7-107P-201ENST00000459121 61 ntBASIC-5.31□□□□□ -3.26
VPS13CQ709C8 MT-TL1-201ENST00000386347 75 ntBASIC-5.32□□□□□ -3.26
VPS13CQ709C8 MIR548X2-201ENST00000579776 100 ntBASIC-5.32□□□□□ -3.26
VPS13CQ709C8 RNU6-314P-201ENST00000516574 104 ntBASIC-5.33□□□□□ -3.26
VPS13CQ709C8 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.33□□□□□ -3.26
VPS13CQ709C8 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.34□□□□□ -3.26
VPS13CQ709C8 DLEU2_1.1-201ENST00000612089 120 ntBASIC-5.34□□□□□ -3.26
VPS13CQ709C8 RNU6-539P-201ENST00000516665 103 ntBASIC-5.34□□□□□ -3.26
VPS13CQ709C8 Y_RNA.277-201ENST00000364754 102 ntBASIC-5.35□□□□□ -3.27
VPS13CQ709C8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.35□□□□□ -3.27
VPS13CQ709C8 Y_RNA.579-201ENST00000390939 94 ntBASIC-5.36□□□□□ -3.27
VPS13CQ709C8 RNU6-463P-201ENST00000384340 107 ntBASIC-5.38□□□□□ -3.27
VPS13CQ709C8 MIR3611-201ENST00000584484 83 ntBASIC-5.38□□□□□ -3.27
VPS13CQ709C8 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-5.38□□□□□ -3.27
VPS13CQ709C8 MTND4LP9-201ENST00000427694 174 ntBASIC-5.38□□□□□ -3.27
VPS13CQ709C8 AC109635.3-201ENST00000529536 185 ntBASIC-5.39□□□□□ -3.27
VPS13CQ709C8 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.39□□□□□ -3.27
VPS13CQ709C8 RNU6-871P-201ENST00000516122 100 ntBASIC-5.4□□□□□ -3.27
VPS13CQ709C8 RNU6-844P-201ENST00000517175 102 ntBASIC-5.4□□□□□ -3.27
VPS13CQ709C8 SNORA33.2-201ENST00000365413 134 ntBASIC-5.41□□□□□ -3.28
VPS13CQ709C8 Y_RNA.210-201ENST00000364161 110 ntBASIC-5.41□□□□□ -3.28
VPS13CQ709C8 RNU6-829P-201ENST00000363700 112 ntBASIC-5.41□□□□□ -3.28
VPS13CQ709C8 Y_RNA.70-201ENST00000362886 110 ntBASIC-5.42□□□□□ -3.28
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms