Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR196A2-201ENST00000385189 110 ntBASIC-0.33□□□□□ -2.46
PRPF40BQ6NWY9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
PRPF40BQ6NWY9 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
PRPF40BQ6NWY9 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
PRPF40BQ6NWY9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.34□□□□□ -2.46
PRPF40BQ6NWY9 SNORA26.4-201ENST00000391188 123 ntBASIC-0.35□□□□□ -2.47
PRPF40BQ6NWY9 AC021146.6-201ENST00000514659 117 ntBASIC-0.35□□□□□ -2.47
PRPF40BQ6NWY9 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.35□□□□□ -2.47
PRPF40BQ6NWY9 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.36□□□□□ -2.47
PRPF40BQ6NWY9 AL353691.2-201ENST00000443795 59 ntBASIC-0.36□□□□□ -2.47
PRPF40BQ6NWY9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.37□□□□□ -2.47
PRPF40BQ6NWY9 RNU6-808P-201ENST00000391233 108 ntBASIC-0.37□□□□□ -2.47
PRPF40BQ6NWY9 SNORA32.3-201ENST00000384772 121 ntBASIC-0.38□□□□□ -2.47
PRPF40BQ6NWY9 MIR125B1-201ENST00000385236 88 ntBASIC-0.38□□□□□ -2.47
PRPF40BQ6NWY9 MIR3170-201ENST00000582699 77 ntBASIC-0.38□□□□□ -2.47
PRPF40BQ6NWY9 SNORD115-33-201ENST00000363723 82 ntBASIC-0.39□□□□□ -2.47
PRPF40BQ6NWY9 SNORD19-201ENST00000391191 68 ntBASIC-0.39□□□□□ -2.47
PRPF40BQ6NWY9 RNU6-141P-201ENST00000410499 105 ntBASIC-0.39□□□□□ -2.47
PRPF40BQ6NWY9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
PRPF40BQ6NWY9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.39□□□□□ -2.47
PRPF40BQ6NWY9 SNORD63.2-201ENST00000516303 64 ntBASIC-0.4□□□□□ -2.47
PRPF40BQ6NWY9 MIR4436A-201ENST00000585278 85 ntBASIC-0.4□□□□□ -2.47
PRPF40BQ6NWY9 MIR198-201ENST00000637333 62 ntBASIC-0.4□□□□□ -2.47
PRPF40BQ6NWY9 MIR548X-201ENST00000580069 75 ntBASIC-0.41□□□□□ -2.48
PRPF40BQ6NWY9 MIR5683-201ENST00000636514 76 ntBASIC-0.41□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.42□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.42□□□□□ -2.48
PRPF40BQ6NWY9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.43□□□□□ -2.48
PRPF40BQ6NWY9 MT-TQ-201ENST00000387372 72 ntBASIC-0.44□□□□□ -2.48
PRPF40BQ6NWY9 RNU6-419P-201ENST00000517030 63 ntBASIC-0.44□□□□□ -2.48
PRPF40BQ6NWY9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.46□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.46□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.46□□□□□ -2.48
PRPF40BQ6NWY9 MIR601-201ENST00000385256 79 ntBASIC-0.46□□□□□ -2.48
PRPF40BQ6NWY9 MIR3681-201ENST00000580089 72 ntBASIC-0.46□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.47□□□□□ -2.48
PRPF40BQ6NWY9 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.48□□□□□ -2.49
PRPF40BQ6NWY9 SNORA3B-201ENST00000391305 131 ntBASIC-0.48□□□□□ -2.49
PRPF40BQ6NWY9 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.48□□□□□ -2.49
PRPF40BQ6NWY9 SNORD45.2-201ENST00000363552 72 ntBASIC-0.49□□□□□ -2.49
PRPF40BQ6NWY9 RNU4-33P-201ENST00000364316 85 ntBASIC-0.49□□□□□ -2.49
PRPF40BQ6NWY9 MIR587-201ENST00000384845 96 ntBASIC-0.49□□□□□ -2.49
PRPF40BQ6NWY9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.49□□□□□ -2.49
PRPF40BQ6NWY9 MIR4320-201ENST00000636981 65 ntBASIC-0.49□□□□□ -2.49
PRPF40BQ6NWY9 U4.2-201ENST00000618561 85 ntBASIC-0.5□□□□□ -2.49
PRPF40BQ6NWY9 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.5□□□□□ -2.49
PRPF40BQ6NWY9 MIR520D-201ENST00000385002 87 ntBASIC-0.51□□□□□ -2.49
PRPF40BQ6NWY9 AL451105.1-201ENST00000450005 189 ntBASIC-0.51□□□□□ -2.49
PRPF40BQ6NWY9 AP002795.1-201ENST00000534879 84 ntBASIC-0.51□□□□□ -2.49
PRPF40BQ6NWY9 RNU6-980P-201ENST00000516925 103 ntBASIC-0.53□□□□□ -2.49
PRPF40BQ6NWY9 MIR507-201ENST00000385234 94 ntBASIC-0.54□□□□□ -2.5
PRPF40BQ6NWY9 RNU6-974P-201ENST00000384099 108 ntBASIC-0.55□□□□□ -2.5
PRPF40BQ6NWY9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
PRPF40BQ6NWY9 RNU6-753P-201ENST00000363926 107 ntBASIC-0.56□□□□□ -2.5
PRPF40BQ6NWY9 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.57□□□□□ -2.5
PRPF40BQ6NWY9 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.57□□□□□ -2.5
PRPF40BQ6NWY9 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.57□□□□□ -2.5
PRPF40BQ6NWY9 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.57□□□□□ -2.5
PRPF40BQ6NWY9 SNORA27.2-201ENST00000363365 126 ntBASIC-0.59□□□□□ -2.5
PRPF40BQ6NWY9 RNU6-258P-201ENST00000390884 101 ntBASIC-0.6□□□□□ -2.51
PRPF40BQ6NWY9 MIR1207-201ENST00000408249 87 ntBASIC-0.6□□□□□ -2.51
PRPF40BQ6NWY9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.6□□□□□ -2.51
PRPF40BQ6NWY9 RNU6-10P-201ENST00000384036 107 ntBASIC-0.61□□□□□ -2.51
PRPF40BQ6NWY9 MIR6738-201ENST00000619620 64 ntBASIC-0.61□□□□□ -2.51
PRPF40BQ6NWY9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.62□□□□□ -2.51
PRPF40BQ6NWY9 RNU6-431P-201ENST00000383874 107 ntBASIC-0.62□□□□□ -2.51
PRPF40BQ6NWY9 RPL35AP4-201ENST00000412007 102 ntBASIC-0.62□□□□□ -2.51
PRPF40BQ6NWY9 AL500527.2-201ENST00000454105 95 ntBASIC-0.62□□□□□ -2.51
PRPF40BQ6NWY9 RNU6-608P-201ENST00000383927 104 ntBASIC-0.64□□□□□ -2.51
PRPF40BQ6NWY9 MIR147A-201ENST00000385079 72 ntBASIC-0.64□□□□□ -2.51
PRPF40BQ6NWY9 SNORD64-201ENST00000386683 67 ntBASIC-0.65□□□□□ -2.51
PRPF40BQ6NWY9 MIR196A1-201ENST00000388006 70 ntBASIC-0.65□□□□□ -2.51
PRPF40BQ6NWY9 RNU6-530P-201ENST00000391180 107 ntBASIC-0.65□□□□□ -2.51
PRPF40BQ6NWY9 RNU4-88P-201ENST00000411220 86 ntBASIC-0.68□□□□□ -2.52
PRPF40BQ6NWY9 MIR4324-201ENST00000584846 72 ntBASIC-0.68□□□□□ -2.52
PRPF40BQ6NWY9 MIR382-201ENST00000637119 76 ntBASIC-0.68□□□□□ -2.52
PRPF40BQ6NWY9 SCARNA17-201ENST00000516183 144 ntBASIC-0.69□□□□□ -2.52
PRPF40BQ6NWY9 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.69□□□□□ -2.52
PRPF40BQ6NWY9 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.69□□□□□ -2.52
PRPF40BQ6NWY9 SNORD83B-201ENST00000386745 93 ntBASIC-0.7□□□□□ -2.52
PRPF40BQ6NWY9 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.7□□□□□ -2.52
PRPF40BQ6NWY9 MIR378F-201ENST00000578143 78 ntBASIC-0.7□□□□□ -2.52
PRPF40BQ6NWY9 SNORD114-3-201ENST00000364969 75 ntBASIC-0.71□□□□□ -2.52
PRPF40BQ6NWY9 MIR4499-201ENST00000584834 69 ntBASIC-0.72□□□□□ -2.52
PRPF40BQ6NWY9 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.74□□□□□ -2.53
PRPF40BQ6NWY9 MIR29B1-201ENST00000385015 81 ntBASIC-0.74□□□□□ -2.53
PRPF40BQ6NWY9 snoU83B.1-201ENST00000517136 88 ntBASIC-0.75□□□□□ -2.53
PRPF40BQ6NWY9 RNU6-930P-201ENST00000390938 100 ntBASIC-0.76□□□□□ -2.53
PRPF40BQ6NWY9 MIR23C-201ENST00000579846 100 ntBASIC-0.76□□□□□ -2.53
PRPF40BQ6NWY9 uc_338.19-201ENST00000616808 99 ntBASIC-0.76□□□□□ -2.53
PRPF40BQ6NWY9 RNU7-134P-201ENST00000458997 64 ntBASIC-0.77□□□□□ -2.53
PRPF40BQ6NWY9 RNU6-838P-201ENST00000363399 108 ntBASIC-0.78□□□□□ -2.53
PRPF40BQ6NWY9 RNA5SP461-201ENST00000516451 104 ntBASIC-0.78□□□□□ -2.53
PRPF40BQ6NWY9 MIR365A-201ENST00000362260 87 ntBASIC-0.79□□□□□ -2.54
PRPF40BQ6NWY9 RNY3P8-201ENST00000411366 126 ntBASIC-0.79□□□□□ -2.54
PRPF40BQ6NWY9 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.81□□□□□ -2.54
PRPF40BQ6NWY9 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.81□□□□□ -2.54
PRPF40BQ6NWY9 AC090616.4-201ENST00000448026 115 ntBASIC-0.81□□□□□ -2.54
PRPF40BQ6NWY9 RNA5SP26-201ENST00000362406 119 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms