Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-122P-201ENST00000516818 107 ntBASIC-5.21□□□□□ -3.24
CCDC58Q4VC31 MIR4680-201ENST00000580906 66 ntBASIC-5.21□□□□□ -3.24
CCDC58Q4VC31 RNU6-1020P-201ENST00000363684 107 ntBASIC-5.22□□□□□ -3.25
CCDC58Q4VC31 Y_RNA.290-201ENST00000364879 114 ntBASIC-5.23□□□□□ -3.25
CCDC58Q4VC31 MIR4801-201ENST00000582704 82 ntBASIC-5.23□□□□□ -3.25
CCDC58Q4VC31 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-5.23□□□□□ -3.25
CCDC58Q4VC31 MIR4317-201ENST00000637586 65 ntBASIC-5.23□□□□□ -3.25
CCDC58Q4VC31 Y_RNA.93-201ENST00000363066 109 ntBASIC-5.24□□□□□ -3.25
CCDC58Q4VC31 RNU6-380P-201ENST00000410207 107 ntBASIC-5.24□□□□□ -3.25
CCDC58Q4VC31 Y_RNA.272-201ENST00000364696 102 ntBASIC-5.25□□□□□ -3.25
CCDC58Q4VC31 SCARNA15.1-201ENST00000516384 125 ntBASIC-5.25□□□□□ -3.25
CCDC58Q4VC31 MIR8062-201ENST00000621515 85 ntBASIC-5.25□□□□□ -3.25
CCDC58Q4VC31 MIR548BB-201ENST00000626714 66 ntBASIC-5.25□□□□□ -3.25
CCDC58Q4VC31 RNU6-1107P-201ENST00000364817 104 ntBASIC-5.26□□□□□ -3.25
CCDC58Q4VC31 MIR154-201ENST00000385243 84 ntBASIC-5.26□□□□□ -3.25
CCDC58Q4VC31 RNU6-267P-201ENST00000516714 103 ntBASIC-5.27□□□□□ -3.25
CCDC58Q4VC31 RNY4P13-201ENST00000384284 96 ntBASIC-5.28□□□□□ -3.25
CCDC58Q4VC31 RNU6-109P-201ENST00000516364 107 ntBASIC-5.29□□□□□ -3.26
CCDC58Q4VC31 RNU6-184P-201ENST00000516514 107 ntBASIC-5.29□□□□□ -3.26
CCDC58Q4VC31 Y_RNA.709-201ENST00000516952 92 ntBASIC-5.29□□□□□ -3.26
CCDC58Q4VC31 MIR548X2-201ENST00000579776 100 ntBASIC-5.29□□□□□ -3.26
CCDC58Q4VC31 RNU6-219P-201ENST00000364728 107 ntBASIC-5.3□□□□□ -3.26
CCDC58Q4VC31 SNORD33.1-201ENST00000516213 88 ntBASIC-5.3□□□□□ -3.26
CCDC58Q4VC31 MIR545-201ENST00000385085 106 ntBASIC-5.31□□□□□ -3.26
CCDC58Q4VC31 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.31□□□□□ -3.26
CCDC58Q4VC31 SNORA33.2-201ENST00000365413 134 ntBASIC-5.32□□□□□ -3.26
CCDC58Q4VC31 SNORA25.5-201ENST00000363782 126 ntBASIC-5.33□□□□□ -3.26
CCDC58Q4VC31 AC020661.2-201ENST00000560114 134 ntBASIC-5.33□□□□□ -3.26
CCDC58Q4VC31 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.35□□□□□ -3.27
CCDC58Q4VC31 RNU4-71P-201ENST00000516258 113 ntBASIC-5.36□□□□□ -3.27
CCDC58Q4VC31 MIR3914-2-201ENST00000637339 95 ntBASIC-5.36□□□□□ -3.27
CCDC58Q4VC31 RNU6-797P-201ENST00000363101 109 ntBASIC-5.37□□□□□ -3.27
CCDC58Q4VC31 RNU7-107P-201ENST00000459121 61 ntBASIC-5.37□□□□□ -3.27
CCDC58Q4VC31 RNU6-70P-201ENST00000516438 60 ntBASIC-5.37□□□□□ -3.27
CCDC58Q4VC31 Y_RNA.818-201ENST00000618813 71 ntBASIC-5.37□□□□□ -3.27
CCDC58Q4VC31 RNU6-474P-201ENST00000384243 107 ntBASIC-5.39□□□□□ -3.27
CCDC58Q4VC31 SNORD116-22-201ENST00000384430 92 ntBASIC-5.39□□□□□ -3.27
CCDC58Q4VC31 SNORA19-201ENST00000384737 128 ntBASIC-5.39□□□□□ -3.27
CCDC58Q4VC31 MIR569-201ENST00000385228 96 ntBASIC-5.39□□□□□ -3.27
CCDC58Q4VC31 Y_RNA.611-201ENST00000410682 108 ntBASIC-5.4□□□□□ -3.27
CCDC58Q4VC31 AC072026.1-201ENST00000605023 201 ntBASIC-5.4□□□□□ -3.27
CCDC58Q4VC31 RNU6-776P-201ENST00000364403 104 ntBASIC-5.41□□□□□ -3.28
CCDC58Q4VC31 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.41□□□□□ -3.28
CCDC58Q4VC31 Y_RNA.356-201ENST00000365475 113 ntBASIC-5.41□□□□□ -3.28
CCDC58Q4VC31 MIR548H4-201ENST00000408689 111 ntBASIC-5.41□□□□□ -3.28
CCDC58Q4VC31 RNA5SP449-201ENST00000516871 130 ntBASIC-5.41□□□□□ -3.28
CCDC58Q4VC31 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.41□□□□□ -3.28
CCDC58Q4VC31 Y_RNA.20-201ENST00000362479 113 ntBASIC-5.42□□□□□ -3.28
CCDC58Q4VC31 RNU6-985P-201ENST00000410182 104 ntBASIC-5.42□□□□□ -3.28
CCDC58Q4VC31 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.42□□□□□ -3.28
CCDC58Q4VC31 RNU6-315P-201ENST00000362666 107 ntBASIC-5.43□□□□□ -3.28
CCDC58Q4VC31 RNU6-1137P-201ENST00000517073 99 ntBASIC-5.43□□□□□ -3.28
CCDC58Q4VC31 RNU6-623P-201ENST00000363143 105 ntBASIC-5.44□□□□□ -3.28
CCDC58Q4VC31 Y_RNA.580-201ENST00000391004 95 ntBASIC-5.44□□□□□ -3.28
CCDC58Q4VC31 MIR1302-5-201ENST00000408164 150 ntBASIC-5.44□□□□□ -3.28
CCDC58Q4VC31 RNU4-85P-201ENST00000364675 123 ntBASIC-5.45□□□□□ -3.28
CCDC58Q4VC31 AL589823.1-201ENST00000429577 183 ntBASIC-5.45□□□□□ -3.28
CCDC58Q4VC31 SNORD116-18-201ENST00000383961 92 ntBASIC-5.46□□□□□ -3.28
CCDC58Q4VC31 RNU6-635P-201ENST00000516651 102 ntBASIC-5.46□□□□□ -3.28
CCDC58Q4VC31 Y_RNA.200-201ENST00000364018 102 ntBASIC-5.47□□□□□ -3.29
CCDC58Q4VC31 AC006160.2-201ENST00000637708 154 ntBASIC-5.47□□□□□ -3.29
CCDC58Q4VC31 Y_RNA.431-201ENST00000384086 102 ntBASIC-5.48□□□□□ -3.29
CCDC58Q4VC31 MIR548X-201ENST00000580069 75 ntBASIC-5.48□□□□□ -3.29
CCDC58Q4VC31 RNU6-979P-201ENST00000383896 107 ntBASIC-5.49□□□□□ -3.29
CCDC58Q4VC31 MTND4LP9-201ENST00000427694 174 ntBASIC-5.49□□□□□ -3.29
CCDC58Q4VC31 Y_RNA.712-201ENST00000517011 92 ntBASIC-5.49□□□□□ -3.29
CCDC58Q4VC31 U6.95-201ENST00000636931 70 ntBASIC-5.49□□□□□ -3.29
CCDC58Q4VC31 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.5□□□□□ -3.29
CCDC58Q4VC31 RNU6-379P-201ENST00000363813 104 ntBASIC-5.51□□□□□ -3.29
CCDC58Q4VC31 RNU6-411P-201ENST00000384451 107 ntBASIC-5.51□□□□□ -3.29
CCDC58Q4VC31 MIR4795-201ENST00000584182 89 ntBASIC-5.51□□□□□ -3.29
CCDC58Q4VC31 RNU6-687P-201ENST00000516443 89 ntBASIC-5.53□□□□□ -3.29
CCDC58Q4VC31 MIR3938-201ENST00000582157 103 ntBASIC-5.53□□□□□ -3.29
CCDC58Q4VC31 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-5.53□□□□□ -3.29
CCDC58Q4VC31 AP000770.2-201ENST00000623694 100 ntBASIC-5.54□□□□□ -3.3
CCDC58Q4VC31 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.55□□□□□ -3.3
CCDC58Q4VC31 SNORD116-21-201ENST00000384507 92 ntBASIC-5.56□□□□□ -3.3
CCDC58Q4VC31 Y_RNA.662-201ENST00000516028 97 ntBASIC-5.56□□□□□ -3.3
CCDC58Q4VC31 AC004792.1-201ENST00000614523 137 ntBASIC-5.57□□□□□ -3.3
CCDC58Q4VC31 RNU6-940P-201ENST00000363433 104 ntBASIC-5.58□□□□□ -3.3
CCDC58Q4VC31 RNU6-426P-201ENST00000516464 97 ntBASIC-5.58□□□□□ -3.3
CCDC58Q4VC31 RNU6-875P-201ENST00000516488 106 ntBASIC-5.59□□□□□ -3.3
CCDC58Q4VC31 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.59□□□□□ -3.3
CCDC58Q4VC31 MIR3134-201ENST00000579433 74 ntBASIC-5.6□□□□□ -3.31
CCDC58Q4VC31 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.61□□□□□ -3.31
CCDC58Q4VC31 Y_RNA.607-201ENST00000410597 98 ntBASIC-5.61□□□□□ -3.31
CCDC58Q4VC31 RNU6-111P-201ENST00000517179 105 ntBASIC-5.61□□□□□ -3.31
CCDC58Q4VC31 RNU6-255P-201ENST00000516957 105 ntBASIC-5.62□□□□□ -3.31
CCDC58Q4VC31 Y_RNA.720-201ENST00000517166 92 ntBASIC-5.62□□□□□ -3.31
CCDC58Q4VC31 Y_RNA.574-201ENST00000384766 95 ntBASIC-5.63□□□□□ -3.31
CCDC58Q4VC31 RNU6-907P-201ENST00000390924 102 ntBASIC-5.63□□□□□ -3.31
CCDC58Q4VC31 RNU6-394P-201ENST00000410735 107 ntBASIC-5.63□□□□□ -3.31
CCDC58Q4VC31 AC134503.1-201ENST00000633048 54 ntBASIC-5.63□□□□□ -3.31
CCDC58Q4VC31 RNU6-1134P-201ENST00000365156 101 ntBASIC-5.65□□□□□ -3.31
CCDC58Q4VC31 Y_RNA.216-201ENST00000364205 93 ntBASIC-5.66□□□□□ -3.32
CCDC58Q4VC31 RNU6-675P-201ENST00000384236 104 ntBASIC-5.66□□□□□ -3.32
CCDC58Q4VC31 MIR363-201ENST00000384840 75 ntBASIC-5.66□□□□□ -3.32
CCDC58Q4VC31 MIR2052-201ENST00000636055 55 ntBASIC-5.66□□□□□ -3.32
CCDC58Q4VC31 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.68□□□□□ -3.32
CCDC58Q4VC31 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.68□□□□□ -3.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms