Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.38□□□□□ -2.63
CCDC144BQ3MJ40 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
CCDC144BQ3MJ40 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.39□□□□□ -2.63
CCDC144BQ3MJ40 RNU6-630P-201ENST00000391258 106 ntBASIC-1.4□□□□□ -2.63
CCDC144BQ3MJ40 RNU6-523P-201ENST00000516304 54 ntBASIC-1.4□□□□□ -2.63
CCDC144BQ3MJ40 SNORD30.1-201ENST00000391309 70 ntBASIC-1.41□□□□□ -2.64
CCDC144BQ3MJ40 AC090616.4-201ENST00000448026 115 ntBASIC-1.42□□□□□ -2.64
CCDC144BQ3MJ40 SNORD1B-201ENST00000363091 84 ntBASIC-1.43□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-776P-201ENST00000364403 104 ntBASIC-1.44□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.44□□□□□ -2.64
CCDC144BQ3MJ40 MIR520D-201ENST00000385002 87 ntBASIC-1.44□□□□□ -2.64
CCDC144BQ3MJ40 SNORA25.4-201ENST00000363666 124 ntBASIC-1.45□□□□□ -2.64
CCDC144BQ3MJ40 MIR889-201ENST00000401280 79 ntBASIC-1.45□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.45□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-164P-201ENST00000364604 103 ntBASIC-1.46□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-608P-201ENST00000383927 104 ntBASIC-1.46□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-649P-201ENST00000384463 107 ntBASIC-1.46□□□□□ -2.64
CCDC144BQ3MJ40 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.46□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-92P-201ENST00000605893 104 ntBASIC-1.46□□□□□ -2.64
CCDC144BQ3MJ40 MIR548AA1-201ENST00000384971 97 ntBASIC-1.47□□□□□ -2.64
CCDC144BQ3MJ40 RNU6-539P-201ENST00000516665 103 ntBASIC-1.47□□□□□ -2.64
CCDC144BQ3MJ40 RNY4P27-201ENST00000363341 96 ntBASIC-1.48□□□□□ -2.65
CCDC144BQ3MJ40 RNU6-706P-201ENST00000517229 104 ntBASIC-1.48□□□□□ -2.65
CCDC144BQ3MJ40 AC091912.2-201ENST00000624798 167 ntBASIC-1.48□□□□□ -2.65
CCDC144BQ3MJ40 MIR6874-201ENST00000635894 71 ntBASIC-1.48□□□□□ -2.65
CCDC144BQ3MJ40 MIR8485-201ENST00000401372 91 ntBASIC-1.49□□□□□ -2.65
CCDC144BQ3MJ40 MIR3170-201ENST00000582699 77 ntBASIC-1.49□□□□□ -2.65
CCDC144BQ3MJ40 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.5□□□□□ -2.65
CCDC144BQ3MJ40 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.51□□□□□ -2.65
CCDC144BQ3MJ40 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CCDC144BQ3MJ40 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.51□□□□□ -2.65
CCDC144BQ3MJ40 RNU6-172P-201ENST00000411000 93 ntBASIC-1.52□□□□□ -2.65
CCDC144BQ3MJ40 AC138207.3-201ENST00000585289 166 ntBASIC-1.52□□□□□ -2.65
CCDC144BQ3MJ40 RNU6-247P-201ENST00000362636 107 ntBASIC-1.53□□□□□ -2.65
CCDC144BQ3MJ40 MIR579-201ENST00000385221 98 ntBASIC-1.53□□□□□ -2.65
CCDC144BQ3MJ40 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.53□□□□□ -2.65
CCDC144BQ3MJ40 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.53□□□□□ -2.65
CCDC144BQ3MJ40 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.54□□□□□ -2.66
CCDC144BQ3MJ40 RNU6-995P-201ENST00000391244 107 ntBASIC-1.54□□□□□ -2.66
CCDC144BQ3MJ40 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.54□□□□□ -2.66
CCDC144BQ3MJ40 RNU7-151P-201ENST00000516930 53 ntBASIC-1.54□□□□□ -2.66
CCDC144BQ3MJ40 U6.111-201ENST00000636093 83 ntBASIC-1.54□□□□□ -2.66
CCDC144BQ3MJ40 AC018880.2-201ENST00000414265 201 ntBASIC-1.55□□□□□ -2.66
CCDC144BQ3MJ40 MIR1246-201ENST00000636535 73 ntBASIC-1.56□□□□□ -2.66
CCDC144BQ3MJ40 RNU6-258P-201ENST00000390884 101 ntBASIC-1.58□□□□□ -2.66
CCDC144BQ3MJ40 AC103706.3-201ENST00000636297 85 ntBASIC-1.59□□□□□ -2.66
CCDC144BQ3MJ40 SNORD60.1-201ENST00000362451 73 ntBASIC-1.6□□□□□ -2.67
CCDC144BQ3MJ40 AC005520.4-201ENST00000604337 90 ntBASIC-1.6□□□□□ -2.67
CCDC144BQ3MJ40 MIR7978-201ENST00000636158 59 ntBASIC-1.6□□□□□ -2.67
CCDC144BQ3MJ40 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.61□□□□□ -2.67
CCDC144BQ3MJ40 SNORD63.2-201ENST00000516303 64 ntBASIC-1.62□□□□□ -2.67
CCDC144BQ3MJ40 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.62□□□□□ -2.67
CCDC144BQ3MJ40 HLA-S-202ENST00000425174 53 ntBASIC-1.63□□□□□ -2.67
CCDC144BQ3MJ40 RNU6-669P-201ENST00000365575 107 ntBASIC-1.64□□□□□ -2.67
CCDC144BQ3MJ40 MIR4511-201ENST00000582784 87 ntBASIC-1.64□□□□□ -2.67
CCDC144BQ3MJ40 SNORA25.5-201ENST00000363782 126 ntBASIC-1.65□□□□□ -2.67
CCDC144BQ3MJ40 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.65□□□□□ -2.67
CCDC144BQ3MJ40 MIR23C-201ENST00000579846 100 ntBASIC-1.65□□□□□ -2.67
CCDC144BQ3MJ40 MIR4520-1-201ENST00000582609 70 ntBASIC-1.66□□□□□ -2.68
CCDC144BQ3MJ40 MIR6502-201ENST00000617296 76 ntBASIC-1.66□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-79P-201ENST00000362511 107 ntBASIC-1.67□□□□□ -2.68
CCDC144BQ3MJ40 MIR125B1-201ENST00000385236 88 ntBASIC-1.67□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-226P-201ENST00000363778 107 ntBASIC-1.68□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-800P-201ENST00000384473 103 ntBASIC-1.68□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-231P-201ENST00000517122 103 ntBASIC-1.68□□□□□ -2.68
CCDC144BQ3MJ40 AC120024.2-201ENST00000576526 175 ntBASIC-1.68□□□□□ -2.68
CCDC144BQ3MJ40 MIR7110-201ENST00000612638 86 ntBASIC-1.68□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-563P-201ENST00000364872 108 ntBASIC-1.69□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-400P-201ENST00000391173 106 ntBASIC-1.69□□□□□ -2.68
CCDC144BQ3MJ40 MIR5591-201ENST00000578248 65 ntBASIC-1.69□□□□□ -2.68
CCDC144BQ3MJ40 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.7□□□□□ -2.68
CCDC144BQ3MJ40 SNORA27.2-201ENST00000363365 126 ntBASIC-1.71□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.71□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-974P-201ENST00000384099 108 ntBASIC-1.71□□□□□ -2.68
CCDC144BQ3MJ40 SNORD116.2-201ENST00000391251 93 ntBASIC-1.71□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-122P-201ENST00000516818 107 ntBASIC-1.71□□□□□ -2.68
CCDC144BQ3MJ40 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.72□□□□□ -2.68
CCDC144BQ3MJ40 RNU6-810P-201ENST00000364001 107 ntBASIC-1.72□□□□□ -2.68
CCDC144BQ3MJ40 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.72□□□□□ -2.68
CCDC144BQ3MJ40 MIR4770-201ENST00000579149 58 ntBASIC-1.72□□□□□ -2.68
CCDC144BQ3MJ40 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.73□□□□□ -2.69
CCDC144BQ3MJ40 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.74□□□□□ -2.69
CCDC144BQ3MJ40 RNU6-638P-201ENST00000516582 104 ntBASIC-1.74□□□□□ -2.69
CCDC144BQ3MJ40 RNU7-160P-201ENST00000516660 62 ntBASIC-1.74□□□□□ -2.69
CCDC144BQ3MJ40 RNU6-940P-201ENST00000363433 104 ntBASIC-1.75□□□□□ -2.69
CCDC144BQ3MJ40 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.76□□□□□ -2.69
CCDC144BQ3MJ40 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.78□□□□□ -2.69
CCDC144BQ3MJ40 AC114801.3-201ENST00000510231 177 ntBASIC-1.78□□□□□ -2.69
CCDC144BQ3MJ40 RNU6-828P-201ENST00000364876 107 ntBASIC-1.79□□□□□ -2.7
CCDC144BQ3MJ40 RNY3P8-201ENST00000411366 126 ntBASIC-1.79□□□□□ -2.7
CCDC144BQ3MJ40 SNORA40B-201ENST00000385573 128 ntBASIC-1.8□□□□□ -2.7
CCDC144BQ3MJ40 AC013734.1-201ENST00000619329 111 ntBASIC-1.8□□□□□ -2.7
CCDC144BQ3MJ40 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.81□□□□□ -2.7
CCDC144BQ3MJ40 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.82□□□□□ -2.7
CCDC144BQ3MJ40 RNU7-119P-201ENST00000459279 63 ntBASIC-1.83□□□□□ -2.7
CCDC144BQ3MJ40 SNORA40.16-201ENST00000517238 121 ntBASIC-1.83□□□□□ -2.7
CCDC144BQ3MJ40 RNU6-695P-201ENST00000391157 104 ntBASIC-1.84□□□□□ -2.7
CCDC144BQ3MJ40 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.84□□□□□ -2.7
CCDC144BQ3MJ40 U6.97-201ENST00000636904 101 ntBASIC-1.84□□□□□ -2.7
CCDC144BQ3MJ40 RNU6-520P-201ENST00000384717 104 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms