Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 RNU6-980P-201ENST00000516925 103 ntBASIC-0.06□□□□□ -2.42
COL4A3Q01955 MIR3666-201ENST00000607845 111 ntBASIC-0.06□□□□□ -2.42
COL4A3Q01955 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
COL4A3Q01955 SNORD4A-201ENST00000459174 72 ntBASIC-0.07□□□□□ -2.42
COL4A3Q01955 RNU6-732P-201ENST00000516033 103 ntBASIC-0.08□□□□□ -2.42
COL4A3Q01955 MIR378F-201ENST00000578143 78 ntBASIC-0.08□□□□□ -2.42
COL4A3Q01955 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.08□□□□□ -2.42
COL4A3Q01955 RNU6-753P-201ENST00000363926 107 ntBASIC-0.08□□□□□ -2.42
COL4A3Q01955 SNORD19-201ENST00000391191 68 ntBASIC-0.08□□□□□ -2.42
COL4A3Q01955 MIR8064-201ENST00000612863 90 ntBASIC-0.08□□□□□ -2.42
COL4A3Q01955 SNORD22.1-201ENST00000516331 125 ntBASIC-0.09□□□□□ -2.42
COL4A3Q01955 RNY4P27-201ENST00000363341 96 ntBASIC-0.1□□□□□ -2.43
COL4A3Q01955 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
COL4A3Q01955 RNU6-828P-201ENST00000364876 107 ntBASIC-0.1□□□□□ -2.43
COL4A3Q01955 MIR4441-201ENST00000582623 100 ntBASIC-0.1□□□□□ -2.43
COL4A3Q01955 MIR3170-201ENST00000582699 77 ntBASIC-0.1□□□□□ -2.43
COL4A3Q01955 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.11□□□□□ -2.43
COL4A3Q01955 SNORD45.2-201ENST00000363552 72 ntBASIC-0.11□□□□□ -2.43
COL4A3Q01955 MIR587-201ENST00000384845 96 ntBASIC-0.11□□□□□ -2.43
COL4A3Q01955 MIR125B1-201ENST00000385236 88 ntBASIC-0.11□□□□□ -2.43
COL4A3Q01955 MIR4788-201ENST00000639104 80 ntBASIC-0.11□□□□□ -2.43
COL4A3Q01955 MIR3681-201ENST00000580089 72 ntBASIC-0.11□□□□□ -2.43
COL4A3Q01955 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.11□□□□□ -2.43
COL4A3Q01955 RNA5SP300-201ENST00000391197 107 ntBASIC-0.12□□□□□ -2.43
COL4A3Q01955 RNU6-247P-201ENST00000362636 107 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 SNORD115-33-201ENST00000363723 82 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 SNORA26.4-201ENST00000391188 123 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 SNORA13-201ENST00000458790 133 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 MIR3179-1-201ENST00000578940 84 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 MIR3179-2-201ENST00000579107 84 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 MIR3179-3-201ENST00000579566 84 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 MIR3179-4-201ENST00000617599 84 ntBASIC-0.13□□□□□ -2.43
COL4A3Q01955 RNU6-974P-201ENST00000384099 108 ntBASIC-0.14□□□□□ -2.43
COL4A3Q01955 SNORD75.1-201ENST00000408373 60 ntBASIC-0.14□□□□□ -2.43
COL4A3Q01955 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.14□□□□□ -2.43
COL4A3Q01955 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.14□□□□□ -2.43
COL4A3Q01955 AP000533.3-201ENST00000447704 118 ntBASIC-0.14□□□□□ -2.43
COL4A3Q01955 RNU6-320P-201ENST00000516511 106 ntBASIC-0.14□□□□□ -2.43
COL4A3Q01955 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.16□□□□□ -2.44
COL4A3Q01955 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.16□□□□□ -2.44
COL4A3Q01955 SNORD63.2-201ENST00000516303 64 ntBASIC-0.16□□□□□ -2.44
COL4A3Q01955 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.17□□□□□ -2.44
COL4A3Q01955 MIR1285-2-201ENST00000408311 88 ntBASIC-0.17□□□□□ -2.44
COL4A3Q01955 AL353691.2-201ENST00000443795 59 ntBASIC-0.17□□□□□ -2.44
COL4A3Q01955 SNORD114-11-201ENST00000363738 75 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 SNORD114-17-201ENST00000364699 75 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 AL451105.1-201ENST00000450005 189 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 AP002795.1-201ENST00000534879 84 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 RNU4-88P-201ENST00000411220 86 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 RNA5SP461-201ENST00000516451 104 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 RNA5SP169-201ENST00000517268 117 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 MIR5683-201ENST00000636514 76 ntBASIC-0.18□□□□□ -2.44
COL4A3Q01955 RNA5SP275-201ENST00000363936 118 ntBASIC-0.19□□□□□ -2.44
COL4A3Q01955 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.19□□□□□ -2.44
COL4A3Q01955 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.19□□□□□ -2.44
COL4A3Q01955 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.19□□□□□ -2.44
COL4A3Q01955 RNU6-721P-201ENST00000410155 105 ntBASIC-0.2□□□□□ -2.44
COL4A3Q01955 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL4A3Q01955 MIR548AZ-201ENST00000616567 95 ntBASIC-0.21□□□□□ -2.44
COL4A3Q01955 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.21□□□□□ -2.44
COL4A3Q01955 SNORA27.2-201ENST00000363365 126 ntBASIC-0.21□□□□□ -2.44
COL4A3Q01955 RNU6-10P-201ENST00000384036 107 ntBASIC-0.21□□□□□ -2.44
COL4A3Q01955 SNORD14C-201ENST00000365382 88 ntBASIC-0.22□□□□□ -2.44
COL4A3Q01955 MIR520D-201ENST00000385002 87 ntBASIC-0.23□□□□□ -2.45
COL4A3Q01955 AC021146.6-201ENST00000514659 117 ntBASIC-0.24□□□□□ -2.45
COL4A3Q01955 SNORD126-201ENST00000459475 77 ntBASIC-0.24□□□□□ -2.45
COL4A3Q01955 RNU6-838P-201ENST00000363399 108 ntBASIC-0.26□□□□□ -2.45
COL4A3Q01955 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
COL4A3Q01955 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.27□□□□□ -2.45
COL4A3Q01955 RNU6-258P-201ENST00000390884 101 ntBASIC-0.27□□□□□ -2.45
COL4A3Q01955 RNU6-930P-201ENST00000390938 100 ntBASIC-0.27□□□□□ -2.45
COL4A3Q01955 RNU6-530P-201ENST00000391180 107 ntBASIC-0.28□□□□□ -2.45
COL4A3Q01955 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.29□□□□□ -2.46
COL4A3Q01955 MIR6738-201ENST00000619620 64 ntBASIC-0.29□□□□□ -2.46
COL4A3Q01955 RNU6-608P-201ENST00000383927 104 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 MIR507-201ENST00000385234 94 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 MIR4324-201ENST00000584846 72 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 MIR29B1-201ENST00000385015 81 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 MIR548AL-201ENST00000578416 97 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.3□□□□□ -2.46
COL4A3Q01955 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.31□□□□□ -2.46
COL4A3Q01955 MIR3165-201ENST00000579874 75 ntBASIC-0.31□□□□□ -2.46
COL4A3Q01955 RNU6-119P-201ENST00000364882 107 ntBASIC-0.33□□□□□ -2.46
COL4A3Q01955 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.33□□□□□ -2.46
COL4A3Q01955 MIR4436A-201ENST00000585278 85 ntBASIC-0.33□□□□□ -2.46
COL4A3Q01955 SNORA3B-201ENST00000391305 131 ntBASIC-0.33□□□□□ -2.46
COL4A3Q01955 MIR548F3-201ENST00000408509 87 ntBASIC-0.33□□□□□ -2.46
COL4A3Q01955 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.34□□□□□ -2.46
COL4A3Q01955 RNU6-284P-201ENST00000411105 106 ntBASIC-0.34□□□□□ -2.46
COL4A3Q01955 RPL35AP4-201ENST00000412007 102 ntBASIC-0.34□□□□□ -2.46
COL4A3Q01955 MIR23C-201ENST00000579846 100 ntBASIC-0.35□□□□□ -2.47
COL4A3Q01955 SNORD114-14-201ENST00000362723 75 ntBASIC-0.36□□□□□ -2.47
COL4A3Q01955 RNU6-742P-201ENST00000365289 107 ntBASIC-0.36□□□□□ -2.47
COL4A3Q01955 MIR196A1-201ENST00000388006 70 ntBASIC-0.37□□□□□ -2.47
COL4A3Q01955 MIR545-201ENST00000385085 106 ntBASIC-0.37□□□□□ -2.47
COL4A3Q01955 RNU6-361P-201ENST00000364454 107 ntBASIC-0.38□□□□□ -2.47
COL4A3Q01955 SCARNA17-201ENST00000516183 144 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms