Protein–RNA interactions for Protein: P61960

UFM1, Ubiquitin-fold modifier 1, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1P61960 MIR365A-201ENST00000362260 87 ntBASIC-1.56□□□□□ -2.66
UFM1P61960 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.56□□□□□ -2.66
UFM1P61960 MIR601-201ENST00000385256 79 ntBASIC-1.56□□□□□ -2.66
UFM1P61960 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.56□□□□□ -2.66
UFM1P61960 RNU6-92P-201ENST00000605893 104 ntBASIC-1.56□□□□□ -2.66
UFM1P61960 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.57□□□□□ -2.66
UFM1P61960 RNU6-630P-201ENST00000391258 106 ntBASIC-1.57□□□□□ -2.66
UFM1P61960 RNU6-871P-201ENST00000516122 100 ntBASIC-1.57□□□□□ -2.66
UFM1P61960 MIR4756-201ENST00000577874 78 ntBASIC-1.57□□□□□ -2.66
UFM1P61960 SNORD1B-201ENST00000363091 84 ntBASIC-1.58□□□□□ -2.66
UFM1P61960 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.58□□□□□ -2.66
UFM1P61960 U4.2-201ENST00000618561 85 ntBASIC-1.58□□□□□ -2.66
UFM1P61960 MIR664B-201ENST00000626756 61 ntBASIC-1.58□□□□□ -2.66
UFM1P61960 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.59□□□□□ -2.66
UFM1P61960 RNU6-523P-201ENST00000516304 54 ntBASIC-1.59□□□□□ -2.66
UFM1P61960 MIR198-201ENST00000637333 62 ntBASIC-1.59□□□□□ -2.66
UFM1P61960 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
UFM1P61960 RPL35AP4-201ENST00000412007 102 ntBASIC-1.6□□□□□ -2.67
UFM1P61960 SNX3P1X-201ENST00000414887 175 ntBASIC-1.6□□□□□ -2.67
UFM1P61960 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.61□□□□□ -2.67
UFM1P61960 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.63□□□□□ -2.67
UFM1P61960 RNU6-995P-201ENST00000391244 107 ntBASIC-1.63□□□□□ -2.67
UFM1P61960 SNORD30.1-201ENST00000391309 70 ntBASIC-1.63□□□□□ -2.67
UFM1P61960 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.63□□□□□ -2.67
UFM1P61960 AC090616.4-201ENST00000448026 115 ntBASIC-1.63□□□□□ -2.67
UFM1P61960 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
UFM1P61960 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.64□□□□□ -2.67
UFM1P61960 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.64□□□□□ -2.67
UFM1P61960 MIR3170-201ENST00000582699 77 ntBASIC-1.64□□□□□ -2.67
UFM1P61960 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.64□□□□□ -2.67
UFM1P61960 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.64□□□□□ -2.67
UFM1P61960 MIR4679-1-201ENST00000637619 75 ntBASIC-1.64□□□□□ -2.67
UFM1P61960 SNORA25.4-201ENST00000363666 124 ntBASIC-1.65□□□□□ -2.67
UFM1P61960 RNU6-79P-201ENST00000362511 107 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 RNY4P27-201ENST00000363341 96 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 RNA5SP225-201ENST00000410874 135 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 HAR1A.1-201ENST00000459583 118 ntBASIC-1.66□□□□□ -2.68
UFM1P61960 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 RNU6-608P-201ENST00000383927 104 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 MIR520D-201ENST00000385002 87 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 RNU6-400P-201ENST00000391173 106 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 RNU6-172P-201ENST00000411000 93 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.67□□□□□ -2.68
UFM1P61960 SNORD60.1-201ENST00000362451 73 ntBASIC-1.68□□□□□ -2.68
UFM1P61960 RNU7-151P-201ENST00000516930 53 ntBASIC-1.68□□□□□ -2.68
UFM1P61960 RNU6-649P-201ENST00000384463 107 ntBASIC-1.69□□□□□ -2.68
UFM1P61960 RNU6-247P-201ENST00000362636 107 ntBASIC-1.7□□□□□ -2.68
UFM1P61960 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.7□□□□□ -2.68
UFM1P61960 MIR1468-201ENST00000410600 86 ntBASIC-1.7□□□□□ -2.68
UFM1P61960 RNU6-980P-201ENST00000516925 103 ntBASIC-1.7□□□□□ -2.68
UFM1P61960 MIR23C-201ENST00000579846 100 ntBASIC-1.7□□□□□ -2.68
UFM1P61960 RNU6-118P-201ENST00000516552 102 ntBASIC-1.71□□□□□ -2.68
UFM1P61960 RNU6-539P-201ENST00000516665 103 ntBASIC-1.71□□□□□ -2.68
UFM1P61960 MIR4662A-201ENST00000637499 67 ntBASIC-1.71□□□□□ -2.68
UFM1P61960 RNA5SP405-201ENST00000363059 114 ntBASIC-1.73□□□□□ -2.69
UFM1P61960 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.73□□□□□ -2.69
UFM1P61960 RNA5SP476-201ENST00000516613 103 ntBASIC-1.73□□□□□ -2.69
UFM1P61960 U6.111-201ENST00000636093 83 ntBASIC-1.73□□□□□ -2.69
UFM1P61960 SNORA25.5-201ENST00000363782 126 ntBASIC-1.74□□□□□ -2.69
UFM1P61960 AC018880.2-201ENST00000414265 201 ntBASIC-1.74□□□□□ -2.69
UFM1P61960 AC005520.4-201ENST00000604337 90 ntBASIC-1.74□□□□□ -2.69
UFM1P61960 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.75□□□□□ -2.69
UFM1P61960 MIR579-201ENST00000385221 98 ntBASIC-1.75□□□□□ -2.69
UFM1P61960 MIR496-201ENST00000385226 102 ntBASIC-1.75□□□□□ -2.69
UFM1P61960 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.75□□□□□ -2.69
UFM1P61960 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.75□□□□□ -2.69
UFM1P61960 MIR7978-201ENST00000636158 59 ntBASIC-1.75□□□□□ -2.69
UFM1P61960 MIR3139-201ENST00000579145 76 ntBASIC-1.76□□□□□ -2.69
UFM1P61960 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.76□□□□□ -2.69
UFM1P61960 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.76□□□□□ -2.69
UFM1P61960 RNU6-776P-201ENST00000364403 104 ntBASIC-1.77□□□□□ -2.69
UFM1P61960 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.77□□□□□ -2.69
UFM1P61960 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.77□□□□□ -2.69
UFM1P61960 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.77□□□□□ -2.69
UFM1P61960 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.77□□□□□ -2.69
UFM1P61960 MIR4511-201ENST00000582784 87 ntBASIC-1.77□□□□□ -2.69
UFM1P61960 RNU6-122P-201ENST00000516818 107 ntBASIC-1.78□□□□□ -2.69
UFM1P61960 MIR7110-201ENST00000612638 86 ntBASIC-1.78□□□□□ -2.69
UFM1P61960 AC103706.3-201ENST00000636297 85 ntBASIC-1.78□□□□□ -2.69
UFM1P61960 RNU6-841P-201ENST00000383872 107 ntBASIC-1.79□□□□□ -2.7
UFM1P61960 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.79□□□□□ -2.7
UFM1P61960 RNU6-695P-201ENST00000391157 104 ntBASIC-1.79□□□□□ -2.7
UFM1P61960 MIR548AM-201ENST00000584298 74 ntBASIC-1.79□□□□□ -2.7
UFM1P61960 SNORD114-3-201ENST00000364969 75 ntBASIC-1.8□□□□□ -2.7
UFM1P61960 RNU7-160P-201ENST00000516660 62 ntBASIC-1.8□□□□□ -2.7
UFM1P61960 MIR3123-201ENST00000583417 75 ntBASIC-1.8□□□□□ -2.7
UFM1P61960 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.81□□□□□ -2.7
UFM1P61960 MIR125B1-201ENST00000385236 88 ntBASIC-1.81□□□□□ -2.7
UFM1P61960 SNORD63.2-201ENST00000516303 64 ntBASIC-1.81□□□□□ -2.7
UFM1P61960 RNU6-231P-201ENST00000517122 103 ntBASIC-1.81□□□□□ -2.7
UFM1P61960 RNA5SP331-201ENST00000364986 107 ntBASIC-1.82□□□□□ -2.7
UFM1P61960 RNU6-669P-201ENST00000365575 107 ntBASIC-1.82□□□□□ -2.7
UFM1P61960 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.82□□□□□ -2.7
UFM1P61960 RNU4-88P-201ENST00000411220 86 ntBASIC-1.83□□□□□ -2.7
UFM1P61960 SNORA27.2-201ENST00000363365 126 ntBASIC-1.84□□□□□ -2.7
UFM1P61960 RNU6-258P-201ENST00000390884 101 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms