Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNA5SP89-201ENST00000410300 108 ntBASIC-1.29□□□□□ -2.62
VCPP55072 RNU6-172P-201ENST00000411000 93 ntBASIC-1.29□□□□□ -2.62
VCPP55072 MTND4LP1-201ENST00000446263 157 ntBASIC-1.29□□□□□ -2.62
VCPP55072 MIR8053-201ENST00000613344 75 ntBASIC-1.29□□□□□ -2.62
VCPP55072 RNU6-44P-201ENST00000384045 107 ntBASIC-1.3□□□□□ -2.62
VCPP55072 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.3□□□□□ -2.62
VCPP55072 RNU7-171P-201ENST00000459581 62 ntBASIC-1.3□□□□□ -2.62
VCPP55072 RNU6-687P-201ENST00000516443 89 ntBASIC-1.3□□□□□ -2.62
VCPP55072 MIR548AI-201ENST00000579940 88 ntBASIC-1.3□□□□□ -2.62
VCPP55072 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.3□□□□□ -2.62
VCPP55072 RNU6-228P-201ENST00000362700 106 ntBASIC-1.31□□□□□ -2.62
VCPP55072 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
VCPP55072 RNU6-695P-201ENST00000391157 104 ntBASIC-1.31□□□□□ -2.62
VCPP55072 RNY3P8-201ENST00000411366 126 ntBASIC-1.31□□□□□ -2.62
VCPP55072 SNORD63.2-201ENST00000516303 64 ntBASIC-1.31□□□□□ -2.62
VCPP55072 MIR581-201ENST00000384895 96 ntBASIC-1.32□□□□□ -2.62
VCPP55072 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.32□□□□□ -2.62
VCPP55072 MIR3123-201ENST00000583417 75 ntBASIC-1.32□□□□□ -2.62
VCPP55072 IGLL4P-201ENST00000614590 133 ntBASIC-1.32□□□□□ -2.62
VCPP55072 MIR429-201ENST00000362106 83 ntBASIC-1.33□□□□□ -2.62
VCPP55072 RNY1P1-201ENST00000364372 112 ntBASIC-1.33□□□□□ -2.62
VCPP55072 RNU6-523P-201ENST00000516304 54 ntBASIC-1.33□□□□□ -2.62
VCPP55072 RNU6-70P-201ENST00000516438 60 ntBASIC-1.33□□□□□ -2.62
VCPP55072 MIR1245B-201ENST00000636115 69 ntBASIC-1.33□□□□□ -2.62
VCPP55072 AC108019.1-201ENST00000512540 175 ntBASIC-1.34□□□□□ -2.62
VCPP55072 MIR4756-201ENST00000577874 78 ntBASIC-1.34□□□□□ -2.62
VCPP55072 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.35□□□□□ -2.63
VCPP55072 MIR494-201ENST00000349529 81 ntBASIC-1.36□□□□□ -2.63
VCPP55072 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.36□□□□□ -2.63
VCPP55072 SNORD18.1-201ENST00000363807 70 ntBASIC-1.36□□□□□ -2.63
VCPP55072 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.36□□□□□ -2.63
VCPP55072 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.36□□□□□ -2.63
VCPP55072 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.36□□□□□ -2.63
VCPP55072 U6.97-201ENST00000636904 101 ntBASIC-1.36□□□□□ -2.63
VCPP55072 SNORD60.1-201ENST00000362451 73 ntBASIC-1.37□□□□□ -2.63
VCPP55072 RNA5SP93-201ENST00000362525 114 ntBASIC-1.37□□□□□ -2.63
VCPP55072 RNU6-247P-201ENST00000362636 107 ntBASIC-1.37□□□□□ -2.63
VCPP55072 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.37□□□□□ -2.63
VCPP55072 SNORA27.2-201ENST00000363365 126 ntBASIC-1.38□□□□□ -2.63
VCPP55072 MIR154-201ENST00000385243 84 ntBASIC-1.38□□□□□ -2.63
VCPP55072 SNORD54-201ENST00000459159 67 ntBASIC-1.38□□□□□ -2.63
VCPP55072 MIR4666B-201ENST00000578142 81 ntBASIC-1.38□□□□□ -2.63
VCPP55072 MIR548W-201ENST00000581970 74 ntBASIC-1.38□□□□□ -2.63
VCPP55072 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.39□□□□□ -2.63
VCPP55072 MIR23C-201ENST00000579846 100 ntBASIC-1.39□□□□□ -2.63
VCPP55072 MIR548AM-201ENST00000584298 74 ntBASIC-1.39□□□□□ -2.63
VCPP55072 RNU6-153P-201ENST00000364422 104 ntBASIC-1.4□□□□□ -2.63
VCPP55072 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.4□□□□□ -2.63
VCPP55072 RNY4P30-201ENST00000410216 95 ntBASIC-1.4□□□□□ -2.63
VCPP55072 RNU6-92P-201ENST00000605893 104 ntBASIC-1.4□□□□□ -2.63
VCPP55072 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.4□□□□□ -2.63
VCPP55072 RNU6-810P-201ENST00000364001 107 ntBASIC-1.41□□□□□ -2.64
VCPP55072 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.42□□□□□ -2.64
VCPP55072 RNU6-841P-201ENST00000383872 107 ntBASIC-1.42□□□□□ -2.64
VCPP55072 RNU6-895P-201ENST00000384125 103 ntBASIC-1.42□□□□□ -2.64
VCPP55072 RNU4-88P-201ENST00000411220 86 ntBASIC-1.42□□□□□ -2.64
VCPP55072 AC062037.1-201ENST00000605302 128 ntBASIC-1.42□□□□□ -2.64
VCPP55072 RNA5SP173-201ENST00000364857 136 ntBASIC-1.43□□□□□ -2.64
VCPP55072 RNU6-995P-201ENST00000391244 107 ntBASIC-1.43□□□□□ -2.64
VCPP55072 snoU13.10-201ENST00000459301 103 ntBASIC-1.43□□□□□ -2.64
VCPP55072 RNU6-542P-201ENST00000516405 103 ntBASIC-1.43□□□□□ -2.64
VCPP55072 RNU6-231P-201ENST00000517122 103 ntBASIC-1.43□□□□□ -2.64
VCPP55072 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.43□□□□□ -2.64
VCPP55072 RNU6-983P-201ENST00000516004 103 ntBASIC-1.44□□□□□ -2.64
VCPP55072 SNORA40.16-201ENST00000517238 121 ntBASIC-1.44□□□□□ -2.64
VCPP55072 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.45□□□□□ -2.64
VCPP55072 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.45□□□□□ -2.64
VCPP55072 U2.22-201ENST00000636441 106 ntBASIC-1.45□□□□□ -2.64
VCPP55072 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.46□□□□□ -2.64
VCPP55072 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.46□□□□□ -2.64
VCPP55072 MIR202-201ENST00000362219 110 ntBASIC-1.47□□□□□ -2.64
VCPP55072 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.47□□□□□ -2.64
VCPP55072 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.47□□□□□ -2.64
VCPP55072 MIR450A2-201ENST00000385022 100 ntBASIC-1.47□□□□□ -2.64
VCPP55072 RNU6-68P-201ENST00000516576 104 ntBASIC-1.47□□□□□ -2.64
VCPP55072 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.47□□□□□ -2.64
VCPP55072 MIR7110-201ENST00000612638 86 ntBASIC-1.47□□□□□ -2.64
VCPP55072 MIR664B-201ENST00000626756 61 ntBASIC-1.47□□□□□ -2.64
VCPP55072 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.48□□□□□ -2.65
VCPP55072 RNU6-294P-201ENST00000364999 102 ntBASIC-1.48□□□□□ -2.65
VCPP55072 RNU6-520P-201ENST00000384717 104 ntBASIC-1.48□□□□□ -2.65
VCPP55072 SNORD116.2-201ENST00000391251 93 ntBASIC-1.48□□□□□ -2.65
VCPP55072 RNU6-634P-201ENST00000459134 106 ntBASIC-1.48□□□□□ -2.65
VCPP55072 RNU7-160P-201ENST00000516660 62 ntBASIC-1.49□□□□□ -2.65
VCPP55072 RNU6-980P-201ENST00000516925 103 ntBASIC-1.49□□□□□ -2.65
VCPP55072 MIR5582-201ENST00000579697 68 ntBASIC-1.49□□□□□ -2.65
VCPP55072 RNU6-411P-201ENST00000384451 107 ntBASIC-1.5□□□□□ -2.65
VCPP55072 MIR548N-201ENST00000408742 75 ntBASIC-1.5□□□□□ -2.65
VCPP55072 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.51□□□□□ -2.65
VCPP55072 SNORA40B-201ENST00000385573 128 ntBASIC-1.51□□□□□ -2.65
VCPP55072 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.51□□□□□ -2.65
VCPP55072 RNU6-122P-201ENST00000516818 107 ntBASIC-1.51□□□□□ -2.65
VCPP55072 RNU6-242P-201ENST00000384359 107 ntBASIC-1.52□□□□□ -2.65
VCPP55072 RNU6-649P-201ENST00000384463 107 ntBASIC-1.52□□□□□ -2.65
VCPP55072 RNU6-663P-201ENST00000391105 106 ntBASIC-1.52□□□□□ -2.65
VCPP55072 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.52□□□□□ -2.65
VCPP55072 SNORA25.5-201ENST00000363782 126 ntBASIC-1.53□□□□□ -2.65
VCPP55072 RNU6-828P-201ENST00000364876 107 ntBASIC-1.53□□□□□ -2.65
VCPP55072 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.53□□□□□ -2.65
VCPP55072 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms