Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.09□□□□□ -2.74
MSH6P52701 RNU6-70P-201ENST00000516438 60 ntBASIC-2.09□□□□□ -2.74
MSH6P52701 MIR3139-201ENST00000579145 76 ntBASIC-2.09□□□□□ -2.74
MSH6P52701 MIR1245B-201ENST00000636115 69 ntBASIC-2.09□□□□□ -2.74
MSH6P52701 RNU6-247P-201ENST00000362636 107 ntBASIC-2.1□□□□□ -2.74
MSH6P52701 RNU6-995P-201ENST00000391244 107 ntBASIC-2.1□□□□□ -2.74
MSH6P52701 RNU7-151P-201ENST00000516930 53 ntBASIC-2.1□□□□□ -2.74
MSH6P52701 MIR154-201ENST00000385243 84 ntBASIC-2.1□□□□□ -2.75
MSH6P52701 RNU6-258P-201ENST00000390884 101 ntBASIC-2.1□□□□□ -2.75
MSH6P52701 RNU6-695P-201ENST00000391157 104 ntBASIC-2.1□□□□□ -2.75
MSH6P52701 MIR4712-201ENST00000583750 82 ntBASIC-2.1□□□□□ -2.75
MSH6P52701 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.11□□□□□ -2.75
MSH6P52701 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.11□□□□□ -2.75
MSH6P52701 RNY4-201ENST00000516507 96 ntBASIC-2.11□□□□□ -2.75
MSH6P52701 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.11□□□□□ -2.75
MSH6P52701 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.11□□□□□ -2.75
MSH6P52701 RNU6-895P-201ENST00000384125 103 ntBASIC-2.12□□□□□ -2.75
MSH6P52701 RNU6-563P-201ENST00000364872 108 ntBASIC-2.13□□□□□ -2.75
MSH6P52701 MIR4756-201ENST00000577874 78 ntBASIC-2.13□□□□□ -2.75
MSH6P52701 SNORA27.2-201ENST00000363365 126 ntBASIC-2.14□□□□□ -2.75
MSH6P52701 RNA5SP89-201ENST00000410300 108 ntBASIC-2.14□□□□□ -2.75
MSH6P52701 MIR664B-201ENST00000626756 61 ntBASIC-2.14□□□□□ -2.75
MSH6P52701 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.15□□□□□ -2.75
MSH6P52701 MIR7978-201ENST00000636158 59 ntBASIC-2.15□□□□□ -2.75
MSH6P52701 RNU6-44P-201ENST00000384045 107 ntBASIC-2.16□□□□□ -2.76
MSH6P52701 RNU6-172P-201ENST00000411000 93 ntBASIC-2.16□□□□□ -2.76
MSH6P52701 RNU6-542P-201ENST00000516405 103 ntBASIC-2.16□□□□□ -2.76
MSH6P52701 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.17□□□□□ -2.76
MSH6P52701 SNORD115-31-201ENST00000365318 82 ntBASIC-2.17□□□□□ -2.76
MSH6P52701 RNU6-669P-201ENST00000365575 107 ntBASIC-2.17□□□□□ -2.76
MSH6P52701 MIR579-201ENST00000385221 98 ntBASIC-2.18□□□□□ -2.76
MSH6P52701 SNORD63.2-201ENST00000516303 64 ntBASIC-2.19□□□□□ -2.76
MSH6P52701 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.2□□□□□ -2.76
MSH6P52701 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.2□□□□□ -2.76
MSH6P52701 MIR125B1-201ENST00000385236 88 ntBASIC-2.2□□□□□ -2.76
MSH6P52701 MT-TM-201ENST00000387377 68 ntBASIC-2.2□□□□□ -2.76
MSH6P52701 MIR3134-201ENST00000579433 74 ntBASIC-2.2□□□□□ -2.76
MSH6P52701 RNY4P30-201ENST00000410216 95 ntBASIC-2.21□□□□□ -2.76
MSH6P52701 RNU6-687P-201ENST00000516443 89 ntBASIC-2.21□□□□□ -2.76
MSH6P52701 RNU6-789P-201ENST00000517105 102 ntBASIC-2.21□□□□□ -2.76
MSH6P52701 MIR548AI-201ENST00000579940 88 ntBASIC-2.21□□□□□ -2.76
MSH6P52701 RNU6-92P-201ENST00000605893 104 ntBASIC-2.21□□□□□ -2.76
MSH6P52701 MIR4666B-201ENST00000578142 81 ntBASIC-2.22□□□□□ -2.76
MSH6P52701 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.22□□□□□ -2.76
MSH6P52701 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.22□□□□□ -2.76
MSH6P52701 RNU6-242P-201ENST00000384359 107 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 RNU6-523P-201ENST00000516304 54 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 MIR3123-201ENST00000583417 75 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.23□□□□□ -2.77
MSH6P52701 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 MIR450A2-201ENST00000385022 100 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 AC005520.4-201ENST00000604337 90 ntBASIC-2.23□□□□□ -2.77
MSH6P52701 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.24□□□□□ -2.77
MSH6P52701 AL603908.1-201ENST00000406098 201 ntBASIC-2.24□□□□□ -2.77
MSH6P52701 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.24□□□□□ -2.77
MSH6P52701 RNU6-841P-201ENST00000383872 107 ntBASIC-2.25□□□□□ -2.77
MSH6P52701 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.25□□□□□ -2.77
MSH6P52701 AC013734.1-201ENST00000619329 111 ntBASIC-2.25□□□□□ -2.77
MSH6P52701 MIR494-201ENST00000349529 81 ntBASIC-2.26□□□□□ -2.77
MSH6P52701 RNU7-160P-201ENST00000516660 62 ntBASIC-2.26□□□□□ -2.77
MSH6P52701 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.27□□□□□ -2.77
MSH6P52701 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.28□□□□□ -2.77
MSH6P52701 RNU6-974P-201ENST00000384099 108 ntBASIC-2.28□□□□□ -2.77
MSH6P52701 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.28□□□□□ -2.77
MSH6P52701 RNA5SP405-201ENST00000363059 114 ntBASIC-2.29□□□□□ -2.78
MSH6P52701 RNU6-153P-201ENST00000364422 104 ntBASIC-2.29□□□□□ -2.78
MSH6P52701 RNU6-406P-201ENST00000516470 107 ntBASIC-2.29□□□□□ -2.78
MSH6P52701 MIR548AM-201ENST00000584298 74 ntBASIC-2.29□□□□□ -2.78
MSH6P52701 SNORD60.1-201ENST00000362451 73 ntBASIC-2.3□□□□□ -2.78
MSH6P52701 RNU6-411P-201ENST00000384451 107 ntBASIC-2.3□□□□□ -2.78
MSH6P52701 RNU6-787P-201ENST00000384032 107 ntBASIC-2.31□□□□□ -2.78
MSH6P52701 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.31□□□□□ -2.78
MSH6P52701 MIR7110-201ENST00000612638 86 ntBASIC-2.31□□□□□ -2.78
MSH6P52701 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.32□□□□□ -2.78
MSH6P52701 RNU6-194P-201ENST00000363862 105 ntBASIC-2.32□□□□□ -2.78
MSH6P52701 RNU6-294P-201ENST00000364999 102 ntBASIC-2.32□□□□□ -2.78
MSH6P52701 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.32□□□□□ -2.78
MSH6P52701 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.32□□□□□ -2.78
MSH6P52701 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.33□□□□□ -2.78
MSH6P52701 RNU4-88P-201ENST00000411220 86 ntBASIC-2.33□□□□□ -2.78
MSH6P52701 RNY3P8-201ENST00000411366 126 ntBASIC-2.33□□□□□ -2.78
MSH6P52701 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.33□□□□□ -2.78
MSH6P52701 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.34□□□□□ -2.78
MSH6P52701 U7.4-201ENST00000614961 63 ntBASIC-2.34□□□□□ -2.78
MSH6P52701 U6.97-201ENST00000636904 101 ntBASIC-2.34□□□□□ -2.78
MSH6P52701 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.35□□□□□ -2.78
MSH6P52701 RNU6-820P-201ENST00000384273 107 ntBASIC-2.35□□□□□ -2.78
MSH6P52701 RNU6-828P-201ENST00000364876 107 ntBASIC-2.36□□□□□ -2.79
MSH6P52701 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.36□□□□□ -2.79
MSH6P52701 RNU6-520P-201ENST00000384717 104 ntBASIC-2.37□□□□□ -2.79
MSH6P52701 RNU6-634P-201ENST00000459134 106 ntBASIC-2.37□□□□□ -2.79
MSH6P52701 RNU6-231P-201ENST00000517122 103 ntBASIC-2.37□□□□□ -2.79
MSH6P52701 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.37□□□□□ -2.79
MSH6P52701 RNU6-810P-201ENST00000364001 107 ntBASIC-2.38□□□□□ -2.79
MSH6P52701 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.39□□□□□ -2.79
MSH6P52701 SNORD18C-201ENST00000362704 69 ntBASIC-2.4□□□□□ -2.79
MSH6P52701 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.4□□□□□ -2.79
MSH6P52701 RNU6-663P-201ENST00000391105 106 ntBASIC-2.41□□□□□ -2.8
MSH6P52701 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.42□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms