Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MIR548BB-201ENST00000626714 66 ntBASIC-3.68□□□□□ -3
GTF2A1P52655 RNU6-810P-201ENST00000364001 107 ntBASIC-3.69□□□□□ -3
GTF2A1P52655 RNU6-219P-201ENST00000364728 107 ntBASIC-3.69□□□□□ -3
GTF2A1P52655 MIR1254-1-201ENST00000408257 97 ntBASIC-3.69□□□□□ -3
GTF2A1P52655 RNU6-1206P-201ENST00000516339 103 ntBASIC-3.69□□□□□ -3
GTF2A1P52655 MIR664A-201ENST00000626086 82 ntBASIC-3.69□□□□□ -3
GTF2A1P52655 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.7□□□□□ -3
GTF2A1P52655 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.7□□□□□ -3
GTF2A1P52655 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.72□□□□□ -3
GTF2A1P52655 SNORD116-22-201ENST00000384430 92 ntBASIC-3.72□□□□□ -3
GTF2A1P52655 SNORD116-24-201ENST00000384549 92 ntBASIC-3.72□□□□□ -3
GTF2A1P52655 RNU6-380P-201ENST00000410207 107 ntBASIC-3.72□□□□□ -3
GTF2A1P52655 RNU6-92P-201ENST00000605893 104 ntBASIC-3.72□□□□□ -3
GTF2A1P52655 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.72□□□□□ -3
GTF2A1P52655 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.73□□□□□ -3.01
GTF2A1P52655 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.73□□□□□ -3.01
GTF2A1P52655 MIR4426-201ENST00000640330 63 ntBASIC-3.73□□□□□ -3.01
GTF2A1P52655 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 MIR606-201ENST00000384851 96 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 MIR509-1-201ENST00000385265 94 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 MIR509-2-201ENST00000390724 91 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 RNU6-267P-201ENST00000516714 103 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 RNU6-231P-201ENST00000517122 103 ntBASIC-3.74□□□□□ -3.01
GTF2A1P52655 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-3.75□□□□□ -3.01
GTF2A1P52655 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.76□□□□□ -3.01
GTF2A1P52655 RNU6-800P-201ENST00000384473 103 ntBASIC-3.76□□□□□ -3.01
GTF2A1P52655 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.77□□□□□ -3.01
GTF2A1P52655 RNU6-590P-201ENST00000365039 107 ntBASIC-3.77□□□□□ -3.01
GTF2A1P52655 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.77□□□□□ -3.01
GTF2A1P52655 RNU6-1296P-201ENST00000383879 107 ntBASIC-3.78□□□□□ -3.01
GTF2A1P52655 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.78□□□□□ -3.01
GTF2A1P52655 RNU6-300P-201ENST00000459080 104 ntBASIC-3.78□□□□□ -3.01
GTF2A1P52655 RNU6-542P-201ENST00000516405 103 ntBASIC-3.78□□□□□ -3.01
GTF2A1P52655 MIR548AI-201ENST00000579940 88 ntBASIC-3.78□□□□□ -3.01
GTF2A1P52655 SNORD60.1-201ENST00000362451 73 ntBASIC-3.79□□□□□ -3.02
GTF2A1P52655 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.79□□□□□ -3.02
GTF2A1P52655 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.79□□□□□ -3.02
GTF2A1P52655 SNORD116.2-201ENST00000391251 93 ntBASIC-3.79□□□□□ -3.02
GTF2A1P52655 RNU6-176P-201ENST00000517196 105 ntBASIC-3.79□□□□□ -3.02
GTF2A1P52655 AL353621.2-201ENST00000605340 133 ntBASIC-3.79□□□□□ -3.02
GTF2A1P52655 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.8□□□□□ -3.02
GTF2A1P52655 SNORD114-13-201ENST00000364377 74 ntBASIC-3.8□□□□□ -3.02
GTF2A1P52655 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.8□□□□□ -3.02
GTF2A1P52655 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.8□□□□□ -3.02
GTF2A1P52655 AL359920.1-201ENST00000618332 176 ntBASIC-3.8□□□□□ -3.02
GTF2A1P52655 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.81□□□□□ -3.02
GTF2A1P52655 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.81□□□□□ -3.02
GTF2A1P52655 SNORA40B-201ENST00000385573 128 ntBASIC-3.81□□□□□ -3.02
GTF2A1P52655 RNU6-345P-201ENST00000517001 107 ntBASIC-3.81□□□□□ -3.02
GTF2A1P52655 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.81□□□□□ -3.02
GTF2A1P52655 SNORD45.2-201ENST00000363552 72 ntBASIC-3.82□□□□□ -3.02
GTF2A1P52655 MIR2052-201ENST00000636055 55 ntBASIC-3.82□□□□□ -3.02
GTF2A1P52655 RNU6-895P-201ENST00000384125 103 ntBASIC-3.83□□□□□ -3.02
GTF2A1P52655 RNU6-738P-201ENST00000384531 106 ntBASIC-3.83□□□□□ -3.02
GTF2A1P52655 RNU7-200P-201ENST00000516105 62 ntBASIC-3.83□□□□□ -3.02
GTF2A1P52655 RNU6-987P-201ENST00000384759 104 ntBASIC-3.84□□□□□ -3.02
GTF2A1P52655 AL451105.1-201ENST00000450005 189 ntBASIC-3.84□□□□□ -3.02
GTF2A1P52655 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.84□□□□□ -3.02
GTF2A1P52655 RNA5SP106-201ENST00000517274 100 ntBASIC-3.84□□□□□ -3.02
GTF2A1P52655 RNU6-797P-201ENST00000363101 109 ntBASIC-3.86□□□□□ -3.03
GTF2A1P52655 AC006160.2-201ENST00000637708 154 ntBASIC-3.86□□□□□ -3.03
GTF2A1P52655 RNU6-315P-201ENST00000362666 107 ntBASIC-3.87□□□□□ -3.03
GTF2A1P52655 RNU6-867P-201ENST00000364956 107 ntBASIC-3.87□□□□□ -3.03
GTF2A1P52655 MIR154-201ENST00000385243 84 ntBASIC-3.87□□□□□ -3.03
GTF2A1P52655 RNY4P10-201ENST00000365571 96 ntBASIC-3.89□□□□□ -3.03
GTF2A1P52655 SNORD116-14-201ENST00000383894 92 ntBASIC-3.89□□□□□ -3.03
GTF2A1P52655 SNORD116-17-201ENST00000383929 92 ntBASIC-3.89□□□□□ -3.03
GTF2A1P52655 SNORD116-15-201ENST00000384445 92 ntBASIC-3.89□□□□□ -3.03
GTF2A1P52655 SNORD116-19-201ENST00000384729 92 ntBASIC-3.89□□□□□ -3.03
GTF2A1P52655 SNORA40.16-201ENST00000517238 121 ntBASIC-3.89□□□□□ -3.03
GTF2A1P52655 RNU6-907P-201ENST00000390924 102 ntBASIC-3.9□□□□□ -3.03
GTF2A1P52655 MIR4801-201ENST00000582704 82 ntBASIC-3.9□□□□□ -3.03
GTF2A1P52655 RNU6-196P-201ENST00000384315 107 ntBASIC-3.91□□□□□ -3.04
GTF2A1P52655 MIR4503-201ENST00000582187 83 ntBASIC-3.91□□□□□ -3.04
GTF2A1P52655 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.92□□□□□ -3.04
GTF2A1P52655 MALAT1.1-201ENST00000618249 95 ntBASIC-3.92□□□□□ -3.04
GTF2A1P52655 RNU6-886P-201ENST00000384319 105 ntBASIC-3.93□□□□□ -3.04
GTF2A1P52655 RNU6-70P-201ENST00000516438 60 ntBASIC-3.93□□□□□ -3.04
GTF2A1P52655 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.94□□□□□ -3.04
GTF2A1P52655 RNU6-675P-201ENST00000384236 104 ntBASIC-3.94□□□□□ -3.04
GTF2A1P52655 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.94□□□□□ -3.04
GTF2A1P52655 Y_RNA.604-201ENST00000410574 102 ntBASIC-3.94□□□□□ -3.04
GTF2A1P52655 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.94□□□□□ -3.04
GTF2A1P52655 RNU6-346P-201ENST00000516288 111 ntBASIC-3.96□□□□□ -3.04
GTF2A1P52655 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.96□□□□□ -3.04
GTF2A1P52655 RNU6-379P-201ENST00000363813 104 ntBASIC-3.97□□□□□ -3.04
GTF2A1P52655 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.97□□□□□ -3.04
GTF2A1P52655 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.98□□□□□ -3.05
GTF2A1P52655 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.98□□□□□ -3.05
GTF2A1P52655 RNU6-737P-201ENST00000365370 107 ntBASIC-3.99□□□□□ -3.05
GTF2A1P52655 Y_RNA.506-201ENST00000384494 102 ntBASIC-4□□□□□ -3.05
GTF2A1P52655 RNY1P5-201ENST00000383890 115 ntBASIC-4.01□□□□□ -3.05
GTF2A1P52655 RNU7-119P-201ENST00000459279 63 ntBASIC-4.01□□□□□ -3.05
GTF2A1P52655 RNU6-388P-201ENST00000517012 105 ntBASIC-4.01□□□□□ -3.05
GTF2A1P52655 RNU6-389P-201ENST00000517048 105 ntBASIC-4.01□□□□□ -3.05
GTF2A1P52655 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.01□□□□□ -3.05
GTF2A1P52655 RNU6-742P-201ENST00000365289 107 ntBASIC-4.02□□□□□ -3.05
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms