Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 RNU6-122P-201ENST00000516818 107 ntBASIC-0.55□□□□□ -2.5
HOXA1P49639 RNU6-164P-201ENST00000364604 103 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 RNU6-649P-201ENST00000384463 107 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 RNU6-800P-201ENST00000384473 103 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 RNU6-30P-201ENST00000384561 107 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 MIR487B-201ENST00000385021 84 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
HOXA1P49639 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 AC120024.2-201ENST00000576526 175 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 MIR4511-201ENST00000582784 87 ntBASIC-0.56□□□□□ -2.5
HOXA1P49639 RNU6-247P-201ENST00000362636 107 ntBASIC-0.57□□□□□ -2.5
HOXA1P49639 MT-TQ-201ENST00000387372 72 ntBASIC-0.57□□□□□ -2.5
HOXA1P49639 MIR4520-1-201ENST00000582609 70 ntBASIC-0.57□□□□□ -2.5
HOXA1P49639 MIR4324-201ENST00000584846 72 ntBASIC-0.57□□□□□ -2.5
HOXA1P49639 MIR429-201ENST00000362106 83 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 RNU6-446P-201ENST00000362827 106 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 RNU6-226P-201ENST00000363778 107 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 SNORD114-15-201ENST00000364687 72 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 MIR581-201ENST00000384895 96 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 snoU13.19-201ENST00000459148 104 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 RNA5SP476-201ENST00000516613 103 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 RNY1P9-201ENST00000532431 109 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 MIR7110-201ENST00000612638 86 ntBASIC-0.58□□□□□ -2.5
HOXA1P49639 RNU6-79P-201ENST00000362511 107 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 SNORD113-4-201ENST00000364802 75 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 SNORA40B-201ENST00000385573 128 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 RNU6-576P-201ENST00000390854 102 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 RNU6-539P-201ENST00000516665 103 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 MIR6502-201ENST00000617296 76 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 U6.97-201ENST00000636904 101 ntBASIC-0.59□□□□□ -2.5
HOXA1P49639 AC110620.1-201ENST00000416042 228 ntBASIC-0.6□□□□□ -2.51
HOXA1P49639 HAR1A.1-201ENST00000459583 118 ntBASIC-0.6□□□□□ -2.51
HOXA1P49639 RNU6-995P-201ENST00000391244 107 ntBASIC-0.61□□□□□ -2.51
HOXA1P49639 AC018880.2-201ENST00000414265 201 ntBASIC-0.61□□□□□ -2.51
HOXA1P49639 AC114801.3-201ENST00000510231 177 ntBASIC-0.61□□□□□ -2.51
HOXA1P49639 MIR466-201ENST00000580653 84 ntBASIC-0.61□□□□□ -2.51
HOXA1P49639 MIR4306-201ENST00000583390 91 ntBASIC-0.61□□□□□ -2.51
HOXA1P49639 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.61□□□□□ -2.51
HOXA1P49639 MIR202-201ENST00000362219 110 ntBASIC-0.62□□□□□ -2.51
HOXA1P49639 RNU6-871P-201ENST00000516122 100 ntBASIC-0.62□□□□□ -2.51
HOXA1P49639 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.62□□□□□ -2.51
HOXA1P49639 MIR6738-201ENST00000619620 64 ntBASIC-0.62□□□□□ -2.51
HOXA1P49639 MIR633-201ENST00000384821 98 ntBASIC-0.63□□□□□ -2.51
HOXA1P49639 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.63□□□□□ -2.51
HOXA1P49639 MIR3115-201ENST00000577915 68 ntBASIC-0.63□□□□□ -2.51
HOXA1P49639 AC103706.3-201ENST00000636297 85 ntBASIC-0.63□□□□□ -2.51
HOXA1P49639 MIR4662A-201ENST00000637499 67 ntBASIC-0.63□□□□□ -2.51
HOXA1P49639 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.64□□□□□ -2.51
HOXA1P49639 RNA5SP86-201ENST00000390869 98 ntBASIC-0.64□□□□□ -2.51
HOXA1P49639 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.64□□□□□ -2.51
HOXA1P49639 MIR3938-201ENST00000582157 103 ntBASIC-0.64□□□□□ -2.51
HOXA1P49639 SNORA27.2-201ENST00000363365 126 ntBASIC-0.65□□□□□ -2.51
HOXA1P49639 RNU6-742P-201ENST00000365289 107 ntBASIC-0.65□□□□□ -2.51
HOXA1P49639 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.65□□□□□ -2.51
HOXA1P49639 RNU6-520P-201ENST00000384717 104 ntBASIC-0.65□□□□□ -2.51
HOXA1P49639 MIR1468-201ENST00000410600 86 ntBASIC-0.65□□□□□ -2.51
HOXA1P49639 RNU6-638P-201ENST00000516582 104 ntBASIC-0.65□□□□□ -2.51
HOXA1P49639 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.66□□□□□ -2.52
HOXA1P49639 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.66□□□□□ -2.52
HOXA1P49639 RNU6-828P-201ENST00000364876 107 ntBASIC-0.66□□□□□ -2.52
HOXA1P49639 RNU6-530P-201ENST00000391180 107 ntBASIC-0.66□□□□□ -2.52
HOXA1P49639 RNU7-160P-201ENST00000516660 62 ntBASIC-0.66□□□□□ -2.52
HOXA1P49639 RNU6-940P-201ENST00000363433 104 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 RNU6-829P-201ENST00000363700 112 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 RNU6-471P-201ENST00000383944 106 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 RNU6-68P-201ENST00000516576 104 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 MIR5591-201ENST00000578248 65 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 MIR548AX-201ENST00000580117 73 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 MIR3123-201ENST00000583417 75 ntBASIC-0.67□□□□□ -2.52
HOXA1P49639 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
HOXA1P49639 RNU6-400P-201ENST00000391173 106 ntBASIC-0.68□□□□□ -2.52
HOXA1P49639 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.69□□□□□ -2.52
HOXA1P49639 RNU6-10P-201ENST00000384036 107 ntBASIC-0.69□□□□□ -2.52
HOXA1P49639 RNU6-695P-201ENST00000391157 104 ntBASIC-0.69□□□□□ -2.52
HOXA1P49639 AL451105.1-201ENST00000450005 189 ntBASIC-0.69□□□□□ -2.52
HOXA1P49639 RNU6-706P-201ENST00000517229 104 ntBASIC-0.69□□□□□ -2.52
HOXA1P49639 MIR548W-201ENST00000581970 74 ntBASIC-0.69□□□□□ -2.52
HOXA1P49639 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 HLA-S-202ENST00000425174 53 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 snoU13.10-201ENST00000459301 103 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 RNA5SP67-201ENST00000516422 131 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 RNU6-419P-201ENST00000517030 63 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 MIR4426-201ENST00000640330 63 ntBASIC-0.7□□□□□ -2.52
HOXA1P49639 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.72□□□□□ -2.52
HOXA1P49639 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.72□□□□□ -2.52
HOXA1P49639 MIR548N-201ENST00000408742 75 ntBASIC-0.72□□□□□ -2.52
HOXA1P49639 RNU7-119P-201ENST00000459279 63 ntBASIC-0.72□□□□□ -2.52
HOXA1P49639 MIR4756-201ENST00000577874 78 ntBASIC-0.72□□□□□ -2.52
HOXA1P49639 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.73□□□□□ -2.53
HOXA1P49639 SNORA17.4-201ENST00000391287 132 ntBASIC-0.73□□□□□ -2.53
HOXA1P49639 MIR548H1-201ENST00000408610 102 ntBASIC-0.73□□□□□ -2.53
HOXA1P49639 RNA5SP461-201ENST00000516451 104 ntBASIC-0.73□□□□□ -2.53
HOXA1P49639 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.73□□□□□ -2.53
HOXA1P49639 RNU6-361P-201ENST00000364454 107 ntBASIC-0.74□□□□□ -2.53
HOXA1P49639 AC079150.2-201ENST00000443733 78 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 819.3 ms