Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SNORD18.1-201ENST00000363807 70 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 MIR581-201ENST00000384895 96 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 MIR450A2-201ENST00000385022 100 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 MIR1468-201ENST00000410600 86 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 AC108019.1-201ENST00000512540 175 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 MIR548AM-201ENST00000584298 74 ntBASIC-1.07□□□□□ -2.58
LHX1P48742 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.08□□□□□ -2.58
LHX1P48742 RNU6-242P-201ENST00000384359 107 ntBASIC-1.08□□□□□ -2.58
LHX1P48742 RNU7-160P-201ENST00000516660 62 ntBASIC-1.08□□□□□ -2.58
LHX1P48742 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.08□□□□□ -2.58
LHX1P48742 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 RNU6-294P-201ENST00000364999 102 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 RNU6-231P-201ENST00000517122 103 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 MIR4756-201ENST00000577874 78 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 AC062037.1-201ENST00000605302 128 ntBASIC-1.09□□□□□ -2.58
LHX1P48742 RNU6-810P-201ENST00000364001 107 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 RNU6-411P-201ENST00000384451 107 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 RNU6-634P-201ENST00000459134 106 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 MIR548W-201ENST00000581970 74 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 MIR7110-201ENST00000612638 86 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 U6.97-201ENST00000636904 101 ntBASIC-1.1□□□□□ -2.59
LHX1P48742 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.11□□□□□ -2.59
LHX1P48742 MIR5582-201ENST00000579697 68 ntBASIC-1.11□□□□□ -2.59
LHX1P48742 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.12□□□□□ -2.59
LHX1P48742 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.12□□□□□ -2.59
LHX1P48742 RNU6-983P-201ENST00000516004 103 ntBASIC-1.12□□□□□ -2.59
LHX1P48742 RNU6-122P-201ENST00000516818 107 ntBASIC-1.12□□□□□ -2.59
LHX1P48742 SNORA40.16-201ENST00000517238 121 ntBASIC-1.12□□□□□ -2.59
LHX1P48742 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 RNU6-820P-201ENST00000384273 107 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 RNU6-520P-201ENST00000384717 104 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 RNU4-88P-201ENST00000411220 86 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 snoU13.19-201ENST00000459148 104 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 U7.4-201ENST00000614961 63 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 MIR1246-201ENST00000636535 73 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 MIR4320-201ENST00000636981 65 ntBASIC-1.13□□□□□ -2.59
LHX1P48742 SNORA25.5-201ENST00000363782 126 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 RNU6-828P-201ENST00000364876 107 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 SNORA40B-201ENST00000385573 128 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 RNU6-663P-201ENST00000391105 106 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 MIR548N-201ENST00000408742 75 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 snoU13.10-201ENST00000459301 103 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 RNA5SP180-201ENST00000516181 101 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 MIR664B-201ENST00000626756 61 ntBASIC-1.14□□□□□ -2.59
LHX1P48742 MIR202-201ENST00000362219 110 ntBASIC-1.15□□□□□ -2.59
LHX1P48742 RNU6-30P-201ENST00000384561 107 ntBASIC-1.15□□□□□ -2.59
LHX1P48742 SNORD116.2-201ENST00000391251 93 ntBASIC-1.15□□□□□ -2.59
LHX1P48742 HAR1A.1-201ENST00000459583 118 ntBASIC-1.15□□□□□ -2.59
LHX1P48742 RNA5SP67-201ENST00000516422 131 ntBASIC-1.15□□□□□ -2.59
LHX1P48742 SNORD18C-201ENST00000362704 69 ntBASIC-1.16□□□□□ -2.6
LHX1P48742 RNU6-361P-201ENST00000364454 107 ntBASIC-1.16□□□□□ -2.6
LHX1P48742 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.16□□□□□ -2.6
LHX1P48742 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.16□□□□□ -2.6
LHX1P48742 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.17□□□□□ -2.6
LHX1P48742 SNORA25.4-201ENST00000363666 124 ntBASIC-1.17□□□□□ -2.6
LHX1P48742 RNU6-68P-201ENST00000516576 104 ntBASIC-1.17□□□□□ -2.6
LHX1P48742 RNU6-649P-201ENST00000384463 107 ntBASIC-1.18□□□□□ -2.6
LHX1P48742 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
LHX1P48742 RNU6-980P-201ENST00000516925 103 ntBASIC-1.18□□□□□ -2.6
LHX1P48742 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.19□□□□□ -2.6
LHX1P48742 SNORA17.4-201ENST00000391287 132 ntBASIC-1.19□□□□□ -2.6
LHX1P48742 MIR4511-201ENST00000582784 87 ntBASIC-1.19□□□□□ -2.6
LHX1P48742 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.19□□□□□ -2.6
LHX1P48742 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.2□□□□□ -2.6
LHX1P48742 SNORD60-201ENST00000383903 83 ntBASIC-1.2□□□□□ -2.6
LHX1P48742 RNU6-573P-201ENST00000383938 106 ntBASIC-1.2□□□□□ -2.6
LHX1P48742 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.2□□□□□ -2.6
LHX1P48742 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
LHX1P48742 SNORD73B-201ENST00000364394 72 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 RNU6-530P-201ENST00000391180 107 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 RNU6-279P-201ENST00000391297 101 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 AL451105.1-201ENST00000450005 189 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 RNU6-857P-201ENST00000515893 110 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 U6.111-201ENST00000636093 83 ntBASIC-1.21□□□□□ -2.6
LHX1P48742 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 SNORD30.1-201ENST00000391309 70 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 MIR1255A-201ENST00000408338 113 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.22□□□□□ -2.6
LHX1P48742 MIR3202-2-201ENST00000635980 79 ntBASIC-1.22□□□□□ -2.6
LHX1P48742 AC103706.3-201ENST00000636297 85 ntBASIC-1.23□□□□□ -2.61
LHX1P48742 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 RNY4P29-201ENST00000410801 97 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 RNU7-119P-201ENST00000459279 63 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 RNU6-539P-201ENST00000516665 103 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 RNU6-419P-201ENST00000517030 63 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 MIR3938-201ENST00000582157 103 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.24□□□□□ -2.61
LHX1P48742 RNA5SP405-201ENST00000363059 114 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms