Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SNORD63.2-201ENST00000516303 64 ntBASIC-1.72□□□□□ -2.68
CXCL12P48061 MIR4666B-201ENST00000578142 81 ntBASIC-1.72□□□□□ -2.68
CXCL12P48061 MIR7978-201ENST00000636158 59 ntBASIC-1.72□□□□□ -2.68
CXCL12P48061 RNU6-669P-201ENST00000365575 107 ntBASIC-1.73□□□□□ -2.69
CXCL12P48061 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.73□□□□□ -2.69
CXCL12P48061 RNU6-542P-201ENST00000516405 103 ntBASIC-1.73□□□□□ -2.69
CXCL12P48061 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.73□□□□□ -2.69
CXCL12P48061 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.73□□□□□ -2.69
CXCL12P48061 RNU6-153P-201ENST00000364422 104 ntBASIC-1.74□□□□□ -2.69
CXCL12P48061 RNU6-695P-201ENST00000391157 104 ntBASIC-1.74□□□□□ -2.69
CXCL12P48061 SNORA27.2-201ENST00000363365 126 ntBASIC-1.75□□□□□ -2.69
CXCL12P48061 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
CXCL12P48061 RNU6-92P-201ENST00000605893 104 ntBASIC-1.75□□□□□ -2.69
CXCL12P48061 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.76□□□□□ -2.69
CXCL12P48061 RNU6-294P-201ENST00000364999 102 ntBASIC-1.76□□□□□ -2.69
CXCL12P48061 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.76□□□□□ -2.69
CXCL12P48061 RNU6-226P-201ENST00000363778 107 ntBASIC-1.77□□□□□ -2.69
CXCL12P48061 RNU6-787P-201ENST00000384032 107 ntBASIC-1.77□□□□□ -2.69
CXCL12P48061 MIR125B1-201ENST00000385236 88 ntBASIC-1.77□□□□□ -2.69
CXCL12P48061 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.77□□□□□ -2.69
CXCL12P48061 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.78□□□□□ -2.69
CXCL12P48061 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.79□□□□□ -2.7
CXCL12P48061 RNU6-411P-201ENST00000384451 107 ntBASIC-1.79□□□□□ -2.7
CXCL12P48061 MIR487B-201ENST00000385021 84 ntBASIC-1.79□□□□□ -2.7
CXCL12P48061 RNU6-523P-201ENST00000516304 54 ntBASIC-1.79□□□□□ -2.7
CXCL12P48061 RNU6-974P-201ENST00000384099 108 ntBASIC-1.8□□□□□ -2.7
CXCL12P48061 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.8□□□□□ -2.7
CXCL12P48061 AC005520.4-201ENST00000604337 90 ntBASIC-1.8□□□□□ -2.7
CXCL12P48061 AC013734.1-201ENST00000619329 111 ntBASIC-1.8□□□□□ -2.7
CXCL12P48061 SNORD60.1-201ENST00000362451 73 ntBASIC-1.81□□□□□ -2.7
CXCL12P48061 MIR3123-201ENST00000583417 75 ntBASIC-1.82□□□□□ -2.7
CXCL12P48061 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.83□□□□□ -2.7
CXCL12P48061 RNU6-820P-201ENST00000384273 107 ntBASIC-1.83□□□□□ -2.7
CXCL12P48061 RNY3P8-201ENST00000411366 126 ntBASIC-1.83□□□□□ -2.7
CXCL12P48061 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.83□□□□□ -2.7
CXCL12P48061 U7.4-201ENST00000614961 63 ntBASIC-1.83□□□□□ -2.7
CXCL12P48061 U2.22-201ENST00000636441 106 ntBASIC-1.83□□□□□ -2.7
CXCL12P48061 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.84□□□□□ -2.7
CXCL12P48061 MIR5582-201ENST00000579697 68 ntBASIC-1.84□□□□□ -2.7
CXCL12P48061 MIR7110-201ENST00000612638 86 ntBASIC-1.84□□□□□ -2.7
CXCL12P48061 U6.97-201ENST00000636904 101 ntBASIC-1.84□□□□□ -2.7
CXCL12P48061 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.85□□□□□ -2.71
CXCL12P48061 RNU6-540P-201ENST00000384622 101 ntBASIC-1.85□□□□□ -2.71
CXCL12P48061 RNU7-160P-201ENST00000516660 62 ntBASIC-1.85□□□□□ -2.71
CXCL12P48061 AC062037.1-201ENST00000605302 128 ntBASIC-1.85□□□□□ -2.71
CXCL12P48061 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.86□□□□□ -2.71
CXCL12P48061 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.86□□□□□ -2.71
CXCL12P48061 RNU6-634P-201ENST00000459134 106 ntBASIC-1.86□□□□□ -2.71
CXCL12P48061 RNU6-231P-201ENST00000517122 103 ntBASIC-1.86□□□□□ -2.71
CXCL12P48061 RNU6-810P-201ENST00000364001 107 ntBASIC-1.87□□□□□ -2.71
CXCL12P48061 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.87□□□□□ -2.71
CXCL12P48061 RNU6-841P-201ENST00000383872 107 ntBASIC-1.87□□□□□ -2.71
CXCL12P48061 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.87□□□□□ -2.71
CXCL12P48061 RNU6-663P-201ENST00000391105 106 ntBASIC-1.87□□□□□ -2.71
CXCL12P48061 MIR1246-201ENST00000636535 73 ntBASIC-1.87□□□□□ -2.71
CXCL12P48061 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.88□□□□□ -2.71
CXCL12P48061 SNORD116.2-201ENST00000391251 93 ntBASIC-1.88□□□□□ -2.71
CXCL12P48061 RNU6-828P-201ENST00000364876 107 ntBASIC-1.89□□□□□ -2.71
CXCL12P48061 SNORD18.1-201ENST00000363807 70 ntBASIC-1.9□□□□□ -2.71
CXCL12P48061 RNU6-520P-201ENST00000384717 104 ntBASIC-1.9□□□□□ -2.71
CXCL12P48061 MIR548AM-201ENST00000584298 74 ntBASIC-1.91□□□□□ -2.72
CXCL12P48061 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.92□□□□□ -2.72
CXCL12P48061 SNORA25.5-201ENST00000363782 126 ntBASIC-1.93□□□□□ -2.72
CXCL12P48061 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.93□□□□□ -2.72
CXCL12P48061 RNU6-122P-201ENST00000516818 107 ntBASIC-1.93□□□□□ -2.72
CXCL12P48061 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.93□□□□□ -2.72
CXCL12P48061 SNORA25.4-201ENST00000363666 124 ntBASIC-1.94□□□□□ -2.72
CXCL12P48061 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.94□□□□□ -2.72
CXCL12P48061 SNORD30.1-201ENST00000391309 70 ntBASIC-1.94□□□□□ -2.72
CXCL12P48061 AC108019.1-201ENST00000512540 175 ntBASIC-1.94□□□□□ -2.72
CXCL12P48061 RNU6-228P-201ENST00000362700 106 ntBASIC-1.95□□□□□ -2.72
CXCL12P48061 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.95□□□□□ -2.72
CXCL12P48061 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.96□□□□□ -2.72
CXCL12P48061 SNORA40B-201ENST00000385573 128 ntBASIC-1.96□□□□□ -2.72
CXCL12P48061 MIR202-201ENST00000362219 110 ntBASIC-1.97□□□□□ -2.72
CXCL12P48061 RNU6-649P-201ENST00000384463 107 ntBASIC-1.97□□□□□ -2.72
CXCL12P48061 SNORD18C-201ENST00000362704 69 ntBASIC-1.98□□□□□ -2.73
CXCL12P48061 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.99□□□□□ -2.73
CXCL12P48061 SNORD60-201ENST00000383903 83 ntBASIC-1.99□□□□□ -2.73
CXCL12P48061 SNORA40.16-201ENST00000517238 121 ntBASIC-1.99□□□□□ -2.73
CXCL12P48061 MIR3202-2-201ENST00000635980 79 ntBASIC-1.99□□□□□ -2.73
CXCL12P48061 MIR581-201ENST00000384895 96 ntBASIC-2□□□□□ -2.73
CXCL12P48061 MIR4756-201ENST00000577874 78 ntBASIC-2□□□□□ -2.73
CXCL12P48061 RNU6-871P-201ENST00000516122 100 ntBASIC-2.01□□□□□ -2.73
CXCL12P48061 SNORD73B-201ENST00000364394 72 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 RNU6-573P-201ENST00000383938 106 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 RNU4-88P-201ENST00000411220 86 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 RNU7-119P-201ENST00000459279 63 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 snoU13.10-201ENST00000459301 103 ntBASIC-2.02□□□□□ -2.73
CXCL12P48061 SNORA17.4-201ENST00000391287 132 ntBASIC-2.03□□□□□ -2.73
CXCL12P48061 MIR1255A-201ENST00000408338 113 ntBASIC-2.03□□□□□ -2.73
CXCL12P48061 MIR548N-201ENST00000408742 75 ntBASIC-2.03□□□□□ -2.73
CXCL12P48061 RNU6-857P-201ENST00000515893 110 ntBASIC-2.03□□□□□ -2.73
CXCL12P48061 RNU6-983P-201ENST00000516004 103 ntBASIC-2.03□□□□□ -2.73
CXCL12P48061 MIR548W-201ENST00000581970 74 ntBASIC-2.03□□□□□ -2.73
CXCL12P48061 RNU6-361P-201ENST00000364454 107 ntBASIC-2.04□□□□□ -2.74
CXCL12P48061 RNU6-530P-201ENST00000391180 107 ntBASIC-2.04□□□□□ -2.74
CXCL12P48061 MIR4511-201ENST00000582784 87 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms