Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.37□□□□□ -2.63
SFTPDP35247 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.37□□□□□ -2.63
SFTPDP35247 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.38□□□□□ -2.63
SFTPDP35247 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.38□□□□□ -2.63
SFTPDP35247 RNU6-820P-201ENST00000384273 107 ntBASIC-1.39□□□□□ -2.63
SFTPDP35247 MIR487B-201ENST00000385021 84 ntBASIC-1.39□□□□□ -2.63
SFTPDP35247 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.4□□□□□ -2.63
SFTPDP35247 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.4□□□□□ -2.63
SFTPDP35247 AC062037.1-201ENST00000605302 128 ntBASIC-1.4□□□□□ -2.63
SFTPDP35247 AC120024.2-201ENST00000576526 175 ntBASIC-1.41□□□□□ -2.64
SFTPDP35247 MIR3134-201ENST00000579433 74 ntBASIC-1.41□□□□□ -2.64
SFTPDP35247 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.41□□□□□ -2.64
SFTPDP35247 SNORD116-24-201ENST00000384549 92 ntBASIC-1.42□□□□□ -2.64
SFTPDP35247 MIR579-201ENST00000385221 98 ntBASIC-1.42□□□□□ -2.64
SFTPDP35247 RNU6-172P-201ENST00000411000 93 ntBASIC-1.42□□□□□ -2.64
SFTPDP35247 AC108019.1-201ENST00000512540 175 ntBASIC-1.42□□□□□ -2.64
SFTPDP35247 RNU7-151P-201ENST00000516930 53 ntBASIC-1.42□□□□□ -2.64
SFTPDP35247 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.42□□□□□ -2.64
SFTPDP35247 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.43□□□□□ -2.64
SFTPDP35247 SNORD115-31-201ENST00000365318 82 ntBASIC-1.43□□□□□ -2.64
SFTPDP35247 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.43□□□□□ -2.64
SFTPDP35247 RNU6-228P-201ENST00000362700 106 ntBASIC-1.44□□□□□ -2.64
SFTPDP35247 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.44□□□□□ -2.64
SFTPDP35247 SNORD63.2-201ENST00000516303 64 ntBASIC-1.44□□□□□ -2.64
SFTPDP35247 RNU6-695P-201ENST00000391157 104 ntBASIC-1.45□□□□□ -2.64
SFTPDP35247 RNU6-542P-201ENST00000516405 103 ntBASIC-1.45□□□□□ -2.64
SFTPDP35247 RNU6-258P-201ENST00000390884 101 ntBASIC-1.46□□□□□ -2.64
SFTPDP35247 RNU6-687P-201ENST00000516443 89 ntBASIC-1.46□□□□□ -2.64
SFTPDP35247 MIR664B-201ENST00000626756 61 ntBASIC-1.46□□□□□ -2.64
SFTPDP35247 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.47□□□□□ -2.64
SFTPDP35247 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.47□□□□□ -2.64
SFTPDP35247 RNU6-563P-201ENST00000364872 108 ntBASIC-1.47□□□□□ -2.64
SFTPDP35247 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.47□□□□□ -2.64
SFTPDP35247 SNORA27.2-201ENST00000363365 126 ntBASIC-1.48□□□□□ -2.65
SFTPDP35247 RNU6-669P-201ENST00000365575 107 ntBASIC-1.48□□□□□ -2.65
SFTPDP35247 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.48□□□□□ -2.65
SFTPDP35247 RNU6-92P-201ENST00000605893 104 ntBASIC-1.48□□□□□ -2.65
SFTPDP35247 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.48□□□□□ -2.65
SFTPDP35247 RNU6-411P-201ENST00000384451 107 ntBASIC-1.49□□□□□ -2.65
SFTPDP35247 RNA5SP170-201ENST00000517150 101 ntBASIC-1.49□□□□□ -2.65
SFTPDP35247 MIR4756-201ENST00000577874 78 ntBASIC-1.49□□□□□ -2.65
SFTPDP35247 RNU6-841P-201ENST00000383872 107 ntBASIC-1.5□□□□□ -2.65
SFTPDP35247 MIR7978-201ENST00000636158 59 ntBASIC-1.5□□□□□ -2.65
SFTPDP35247 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.51□□□□□ -2.65
SFTPDP35247 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
SFTPDP35247 MIR3123-201ENST00000583417 75 ntBASIC-1.51□□□□□ -2.65
SFTPDP35247 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.51□□□□□ -2.65
SFTPDP35247 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.52□□□□□ -2.65
SFTPDP35247 MIR548AM-201ENST00000584298 74 ntBASIC-1.52□□□□□ -2.65
SFTPDP35247 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.52□□□□□ -2.65
SFTPDP35247 RNY4P27-201ENST00000363341 96 ntBASIC-1.53□□□□□ -2.65
SFTPDP35247 SNORD73B-201ENST00000364394 72 ntBASIC-1.53□□□□□ -2.65
SFTPDP35247 MIR125B1-201ENST00000385236 88 ntBASIC-1.54□□□□□ -2.66
SFTPDP35247 RNU6-523P-201ENST00000516304 54 ntBASIC-1.54□□□□□ -2.66
SFTPDP35247 MIR7110-201ENST00000612638 86 ntBASIC-1.54□□□□□ -2.66
SFTPDP35247 U7.4-201ENST00000614961 63 ntBASIC-1.54□□□□□ -2.66
SFTPDP35247 SNORD60.1-201ENST00000362451 73 ntBASIC-1.55□□□□□ -2.66
SFTPDP35247 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.55□□□□□ -2.66
SFTPDP35247 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.55□□□□□ -2.66
SFTPDP35247 RNU7-160P-201ENST00000516660 62 ntBASIC-1.55□□□□□ -2.66
SFTPDP35247 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.55□□□□□ -2.66
SFTPDP35247 U6.97-201ENST00000636904 101 ntBASIC-1.55□□□□□ -2.66
SFTPDP35247 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.56□□□□□ -2.66
SFTPDP35247 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.56□□□□□ -2.66
SFTPDP35247 RNU6-980P-201ENST00000516925 103 ntBASIC-1.56□□□□□ -2.66
SFTPDP35247 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 RNU6-828P-201ENST00000364876 107 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 RNU6-663P-201ENST00000391105 106 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 SNORD116.2-201ENST00000391251 93 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 RNY3P8-201ENST00000411366 126 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.57□□□□□ -2.66
SFTPDP35247 AC005520.4-201ENST00000604337 90 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 AC013734.1-201ENST00000619329 111 ntBASIC-1.57□□□□□ -2.66
SFTPDP35247 RNU6-231P-201ENST00000517122 103 ntBASIC-1.58□□□□□ -2.66
SFTPDP35247 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 RNA5SP405-201ENST00000363059 114 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 RNU6-810P-201ENST00000364001 107 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 RNU6-573P-201ENST00000383938 106 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 RNU6-974P-201ENST00000384099 108 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 RNU6-634P-201ENST00000459134 106 ntBASIC-1.59□□□□□ -2.66
SFTPDP35247 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.6□□□□□ -2.67
SFTPDP35247 RNU6-520P-201ENST00000384717 104 ntBASIC-1.6□□□□□ -2.67
SFTPDP35247 RNU4-88P-201ENST00000411220 86 ntBASIC-1.6□□□□□ -2.67
SFTPDP35247 MIR3202-2-201ENST00000635980 79 ntBASIC-1.6□□□□□ -2.67
SFTPDP35247 RNY4P29-201ENST00000410801 97 ntBASIC-1.61□□□□□ -2.67
SFTPDP35247 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.62□□□□□ -2.67
SFTPDP35247 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.62□□□□□ -2.67
SFTPDP35247 SNORD30.1-201ENST00000391309 70 ntBASIC-1.62□□□□□ -2.67
SFTPDP35247 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.63□□□□□ -2.67
SFTPDP35247 SNORA25.4-201ENST00000363666 124 ntBASIC-1.63□□□□□ -2.67
SFTPDP35247 SNORA25.5-201ENST00000363782 126 ntBASIC-1.63□□□□□ -2.67
SFTPDP35247 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.63□□□□□ -2.67
SFTPDP35247 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.63□□□□□ -2.67
SFTPDP35247 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.63□□□□□ -2.67
SFTPDP35247 SNORD60-201ENST00000383903 83 ntBASIC-1.64□□□□□ -2.67
SFTPDP35247 RNU6-649P-201ENST00000384463 107 ntBASIC-1.64□□□□□ -2.67
SFTPDP35247 SNORA26.2-201ENST00000390922 122 ntBASIC-1.64□□□□□ -2.67
SFTPDP35247 RNU6-871P-201ENST00000516122 100 ntBASIC-1.64□□□□□ -2.67
SFTPDP35247 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms