Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNY3P16-201ENST00000516338 101 ntBASIC-6.42□□□□□ -3.44
VCANP13611 MIR4999-201ENST00000585029 91 ntBASIC-6.42□□□□□ -3.44
VCANP13611 RNU6-675P-201ENST00000384236 104 ntBASIC-6.42□□□□□ -3.44
VCANP13611 DLEU2_4.2-201ENST00000616613 58 ntBASIC-6.42□□□□□ -3.44
VCANP13611 MIR4282-201ENST00000583613 67 ntBASIC-6.43□□□□□ -3.44
VCANP13611 Y_RNA.339-201ENST00000365325 102 ntBASIC-6.44□□□□□ -3.44
VCANP13611 MIR1245B-201ENST00000636115 69 ntBASIC-6.44□□□□□ -3.44
VCANP13611 snoMBII-202.2-201ENST00000517263 86 ntBASIC-6.44□□□□□ -3.44
VCANP13611 Y_RNA.459-201ENST00000384251 102 ntBASIC-6.45□□□□□ -3.44
VCANP13611 RNU6-835P-201ENST00000516974 104 ntBASIC-6.46□□□□□ -3.44
VCANP13611 Y_RNA.579-201ENST00000390939 94 ntBASIC-6.46□□□□□ -3.44
VCANP13611 RNU6-121P-201ENST00000410525 99 ntBASIC-6.46□□□□□ -3.44
VCANP13611 SNORD58B-201ENST00000607313 66 ntBASIC-6.46□□□□□ -3.44
VCANP13611 RNU6-500P-201ENST00000362349 107 ntBASIC-6.47□□□□□ -3.44
VCANP13611 AL157777.2-201ENST00000258070 137 ntBASIC-6.48□□□□□ -3.45
VCANP13611 RNU6-936P-201ENST00000384005 107 ntBASIC-6.49□□□□□ -3.45
VCANP13611 Y_RNA.619-201ENST00000410951 90 ntBASIC-6.5□□□□□ -3.45
VCANP13611 Y_RNA.316-201ENST00000365118 111 ntBASIC-6.51□□□□□ -3.45
VCANP13611 MIR4712-201ENST00000583750 82 ntBASIC-6.52□□□□□ -3.45
VCANP13611 RNU6-772P-201ENST00000516042 105 ntBASIC-6.52□□□□□ -3.45
VCANP13611 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-6.55□□□□□ -3.46
VCANP13611 NBR2-204ENST00000587322 63 ntBASIC-6.55□□□□□ -3.46
VCANP13611 AC090582.1-201ENST00000636321 199 ntBASIC-6.55□□□□□ -3.46
VCANP13611 SNORA63.7-201ENST00000365579 123 ntBASIC-6.55□□□□□ -3.46
VCANP13611 MTND2P14-201ENST00000482139 351 ntBASIC-6.55□□□□□ -3.46
VCANP13611 RNU6-1188P-201ENST00000363795 107 ntBASIC-6.56□□□□□ -3.46
VCANP13611 Y_RNA.26-201ENST00000362539 101 ntBASIC-6.57□□□□□ -3.46
VCANP13611 AC109635.3-201ENST00000529536 185 ntBASIC-6.57□□□□□ -3.46
VCANP13611 Y_RNA.73-201ENST00000362910 113 ntBASIC-6.57□□□□□ -3.46
VCANP13611 SNORD116.3-201ENST00000517176 78 ntBASIC-6.58□□□□□ -3.46
VCANP13611 Y_RNA.661-201ENST00000516003 99 ntBASIC-6.58□□□□□ -3.46
VCANP13611 Y_RNA.632-201ENST00000459189 102 ntBASIC-6.59□□□□□ -3.46
VCANP13611 RNU6-724P-201ENST00000390958 105 ntBASIC-6.6□□□□□ -3.47
VCANP13611 RNU7-197P-201ENST00000458836 62 ntBASIC-6.61□□□□□ -3.47
VCANP13611 RNU7-171P-201ENST00000459581 62 ntBASIC-6.61□□□□□ -3.47
VCANP13611 RNU6-844P-201ENST00000517175 102 ntBASIC-6.61□□□□□ -3.47
VCANP13611 Y_RNA.88-201ENST00000363029 99 ntBASIC-6.63□□□□□ -3.47
VCANP13611 RNU4-71P-201ENST00000516258 113 ntBASIC-6.64□□□□□ -3.47
VCANP13611 MIR559-201ENST00000385188 96 ntBASIC-6.65□□□□□ -3.47
VCANP13611 MTND2P30-201ENST00000456663 382 ntBASIC-6.66□□□□□ -3.48
VCANP13611 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-6.66□□□□□ -3.48
VCANP13611 Y_RNA.496-201ENST00000384444 101 ntBASIC-6.68□□□□□ -3.48
VCANP13611 MALAT1.1-201ENST00000618249 95 ntBASIC-6.69□□□□□ -3.48
VCANP13611 MIR5588-201ENST00000581890 63 ntBASIC-6.69□□□□□ -3.48
VCANP13611 SNORA40.13-201ENST00000516379 120 ntBASIC-6.71□□□□□ -3.48
VCANP13611 IGLL4P-201ENST00000614590 133 ntBASIC-6.71□□□□□ -3.48
VCANP13611 Y_RNA.19-201ENST00000362462 99 ntBASIC-6.74□□□□□ -3.49
VCANP13611 MTND5P22-201ENST00000458380 195 ntBASIC-6.74□□□□□ -3.49
VCANP13611 MIR4643-201ENST00000577473 78 ntBASIC-6.74□□□□□ -3.49
VCANP13611 SNORD116-21-201ENST00000384507 92 ntBASIC-6.75□□□□□ -3.49
VCANP13611 AC079150.2-201ENST00000443733 78 ntBASIC-6.75□□□□□ -3.49
VCANP13611 MIR6863-201ENST00000636112 90 ntBASIC-6.75□□□□□ -3.49
VCANP13611 AL353621.2-201ENST00000605340 133 ntBASIC-6.76□□□□□ -3.49
VCANP13611 RNU6-1085P-201ENST00000363576 107 ntBASIC-6.76□□□□□ -3.49
VCANP13611 Y_RNA.516-201ENST00000384541 124 ntBASIC-6.76□□□□□ -3.49
VCANP13611 MIR5690-201ENST00000583739 73 ntBASIC-6.76□□□□□ -3.49
VCANP13611 U6.95-201ENST00000636931 70 ntBASIC-6.76□□□□□ -3.49
VCANP13611 Y_RNA.386-201ENST00000383913 105 ntBASIC-6.77□□□□□ -3.49
VCANP13611 RNU6-918P-201ENST00000391219 106 ntBASIC-6.77□□□□□ -3.49
VCANP13611 RNU6-988P-201ENST00000519081 107 ntBASIC-6.78□□□□□ -3.49
VCANP13611 MIR633-201ENST00000384821 98 ntBASIC-6.78□□□□□ -3.5
VCANP13611 RNU7-107P-201ENST00000459121 61 ntBASIC-6.79□□□□□ -3.5
VCANP13611 RNU6-908P-201ENST00000410160 94 ntBASIC-6.8□□□□□ -3.5
VCANP13611 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-6.81□□□□□ -3.5
VCANP13611 DLEU2_1.1-201ENST00000612089 120 ntBASIC-6.81□□□□□ -3.5
VCANP13611 MTND4LP32-201ENST00000636111 270 ntBASIC-6.81□□□□□ -3.5
VCANP13611 MIR4666B-201ENST00000578142 81 ntBASIC-6.82□□□□□ -3.5
VCANP13611 SNORA26.2-201ENST00000390922 122 ntBASIC-6.82□□□□□ -3.5
VCANP13611 RNU6-1143P-201ENST00000516125 104 ntBASIC-6.84□□□□□ -3.5
VCANP13611 MIR3671-201ENST00000580455 88 ntBASIC-6.84□□□□□ -3.5
VCANP13611 AC004792.1-201ENST00000614523 137 ntBASIC-6.85□□□□□ -3.51
VCANP13611 RNU6-242P-201ENST00000384359 107 ntBASIC-6.85□□□□□ -3.51
VCANP13611 MIR3914-2-201ENST00000637339 95 ntBASIC-6.85□□□□□ -3.51
VCANP13611 RNU6-147P-201ENST00000383983 107 ntBASIC-6.86□□□□□ -3.51
VCANP13611 RNY3P10-201ENST00000384764 102 ntBASIC-6.86□□□□□ -3.51
VCANP13611 AC040904.1-201ENST00000590850 223 ntBASIC-6.87□□□□□ -3.51
VCANP13611 MIR1302-11-201ENST00000408051 138 ntBASIC-6.88□□□□□ -3.51
VCANP13611 MIR1302-9-201ENST00000408365 138 ntBASIC-6.88□□□□□ -3.51
VCANP13611 MIR1302-10-201ENST00000408734 138 ntBASIC-6.88□□□□□ -3.51
VCANP13611 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-6.88□□□□□ -3.51
VCANP13611 MIR1302-2-201ENST00000607096 138 ntBASIC-6.88□□□□□ -3.51
VCANP13611 MIR4528-201ENST00000577763 90 ntBASIC-6.89□□□□□ -3.51
VCANP13611 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-6.89□□□□□ -3.51
VCANP13611 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-6.89□□□□□ -3.51
VCANP13611 Y_RNA.593-201ENST00000410292 98 ntBASIC-6.9□□□□□ -3.51
VCANP13611 RNU6-314P-201ENST00000516574 104 ntBASIC-6.91□□□□□ -3.51
VCANP13611 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-6.91□□□□□ -3.52
VCANP13611 Y_RNA.277-201ENST00000364754 102 ntBASIC-6.92□□□□□ -3.52
VCANP13611 Y_RNA.626-201ENST00000411288 95 ntBASIC-6.92□□□□□ -3.52
VCANP13611 Y_RNA.635-201ENST00000459041 101 ntBASIC-6.92□□□□□ -3.52
VCANP13611 RNU6-614P-201ENST00000384369 107 ntBASIC-6.92□□□□□ -3.52
VCANP13611 SNORA26.8-201ENST00000391306 124 ntBASIC-6.92□□□□□ -3.52
VCANP13611 MIR1252-201ENST00000408861 65 ntBASIC-6.92□□□□□ -3.52
VCANP13611 U6.59-201ENST00000615686 107 ntBASIC-6.92□□□□□ -3.52
VCANP13611 RNU6-1276P-201ENST00000365372 104 ntBASIC-6.92□□□□□ -3.52
VCANP13611 RNU6-499P-201ENST00000365615 107 ntBASIC-6.92□□□□□ -3.52
VCANP13611 RNU6-823P-201ENST00000391042 103 ntBASIC-6.95□□□□□ -3.52
VCANP13611 Y_RNA.693-201ENST00000516641 110 ntBASIC-6.96□□□□□ -3.52
VCANP13611 Y_RNA.645-201ENST00000391229 102 ntBASIC-6.97□□□□□ -3.52
VCANP13611 MIR548X2-201ENST00000579776 100 ntBASIC-6.97□□□□□ -3.52
Retrieved 100 of 98,524 protein–RNA pairs in 275.1 ms