Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.277-201ENST00000364754 102 ntBASIC-7.84□□□□□ -3.66
TOP2AP11388 Y_RNA.645-201ENST00000391229 102 ntBASIC-7.84□□□□□ -3.66
TOP2AP11388 RNU6-59P-201ENST00000384787 107 ntBASIC-7.85□□□□□ -3.67
TOP2AP11388 SNORD113-1-201ENST00000365321 69 ntBASIC-7.86□□□□□ -3.67
TOP2AP11388 RNU4-33P-201ENST00000364316 85 ntBASIC-7.87□□□□□ -3.67
TOP2AP11388 AC109635.3-201ENST00000529536 185 ntBASIC-7.87□□□□□ -3.67
TOP2AP11388 RNU6-907P-201ENST00000390924 102 ntBASIC-7.88□□□□□ -3.67
TOP2AP11388 Y_RNA.187-201ENST00000363918 113 ntBASIC-7.88□□□□□ -3.67
TOP2AP11388 SNORA40.4-201ENST00000390971 128 ntBASIC-7.88□□□□□ -3.67
TOP2AP11388 RNU6-109P-201ENST00000516364 107 ntBASIC-7.9□□□□□ -3.67
TOP2AP11388 RNU6-184P-201ENST00000516514 107 ntBASIC-7.9□□□□□ -3.67
TOP2AP11388 SNORA81.3-201ENST00000517283 198 ntBASIC-7.9□□□□□ -3.67
TOP2AP11388 RNU6-772P-201ENST00000516042 105 ntBASIC-7.91□□□□□ -3.68
TOP2AP11388 MTND4LP32-201ENST00000636111 270 ntBASIC-7.91□□□□□ -3.68
TOP2AP11388 SNORA25.4-201ENST00000363666 124 ntBASIC-7.92□□□□□ -3.68
TOP2AP11388 Y_RNA.259-201ENST00000364619 101 ntBASIC-7.92□□□□□ -3.68
TOP2AP11388 RNU6-663P-201ENST00000391105 106 ntBASIC-7.93□□□□□ -3.68
TOP2AP11388 RNU6-988P-201ENST00000519081 107 ntBASIC-7.93□□□□□ -3.68
TOP2AP11388 RNU6-259P-201ENST00000383999 107 ntBASIC-7.94□□□□□ -3.68
TOP2AP11388 Y_RNA.818-201ENST00000618813 71 ntBASIC-7.94□□□□□ -3.68
TOP2AP11388 RNU6-986P-201ENST00000363133 102 ntBASIC-7.95□□□□□ -3.68
TOP2AP11388 AC072026.1-201ENST00000605023 201 ntBASIC-7.95□□□□□ -3.68
TOP2AP11388 Y_RNA.58-201ENST00000362807 102 ntBASIC-7.96□□□□□ -3.68
TOP2AP11388 Y_RNA.210-201ENST00000364161 110 ntBASIC-7.96□□□□□ -3.68
TOP2AP11388 RNU6-1312P-201ENST00000362425 108 ntBASIC-7.97□□□□□ -3.68
TOP2AP11388 SNORA19-201ENST00000384737 128 ntBASIC-7.97□□□□□ -3.68
TOP2AP11388 MIR3134-201ENST00000579433 74 ntBASIC-7.97□□□□□ -3.68
TOP2AP11388 MIR4511-201ENST00000582784 87 ntBASIC-7.97□□□□□ -3.68
TOP2AP11388 SNORD116-29-201ENST00000384516 83 ntBASIC-7.99□□□□□ -3.69
TOP2AP11388 RNU5A-2P-201ENST00000384337 116 ntBASIC-8□□□□□ -3.69
TOP2AP11388 MIR1302-5-201ENST00000408164 150 ntBASIC-8□□□□□ -3.69
TOP2AP11388 AC113139.1-201ENST00000605049 239 ntBASIC-8□□□□□ -3.69
TOP2AP11388 Y_RNA.607-201ENST00000410597 98 ntBASIC-8.02□□□□□ -3.69
TOP2AP11388 AC103706.3-201ENST00000636297 85 ntBASIC-8.03□□□□□ -3.69
TOP2AP11388 SNORD116-4-201ENST00000384733 96 ntBASIC-8.03□□□□□ -3.7
TOP2AP11388 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-8.03□□□□□ -3.7
TOP2AP11388 RNU6-1135P-201ENST00000411083 103 ntBASIC-8.06□□□□□ -3.7
TOP2AP11388 DLEU2_1.1-201ENST00000612089 120 ntBASIC-8.07□□□□□ -3.7
TOP2AP11388 RNU6-956P-201ENST00000458868 103 ntBASIC-8.08□□□□□ -3.7
TOP2AP11388 RNY4P14-201ENST00000363656 96 ntBASIC-8.08□□□□□ -3.7
TOP2AP11388 SNORD33.1-201ENST00000516213 88 ntBASIC-8.09□□□□□ -3.7
TOP2AP11388 RNU7-152P-201ENST00000458982 64 ntBASIC-8.1□□□□□ -3.71
TOP2AP11388 Y_RNA.788-201ENST00000622394 112 ntBASIC-8.11□□□□□ -3.71
TOP2AP11388 RNU6-959P-201ENST00000384671 107 ntBASIC-8.13□□□□□ -3.71
TOP2AP11388 RNU6-209P-201ENST00000384118 107 ntBASIC-8.14□□□□□ -3.71
TOP2AP11388 MIR548X2-201ENST00000579776 100 ntBASIC-8.14□□□□□ -3.71
TOP2AP11388 AC141273.2-201ENST00000618989 130 ntBASIC-8.15□□□□□ -3.71
TOP2AP11388 Y_RNA.516-201ENST00000384541 124 ntBASIC-8.16□□□□□ -3.72
TOP2AP11388 Y_RNA.272-201ENST00000364696 102 ntBASIC-8.17□□□□□ -3.72
TOP2AP11388 Y_RNA.573-201ENST00000384763 105 ntBASIC-8.17□□□□□ -3.72
TOP2AP11388 MIR3611-201ENST00000584484 83 ntBASIC-8.18□□□□□ -3.72
TOP2AP11388 MIR2052-201ENST00000636055 55 ntBASIC-8.18□□□□□ -3.72
TOP2AP11388 RNU6-634P-201ENST00000459134 106 ntBASIC-8.19□□□□□ -3.72
TOP2AP11388 Y_RNA.316-201ENST00000365118 111 ntBASIC-8.2□□□□□ -3.72
TOP2AP11388 RNU6-314P-201ENST00000516574 104 ntBASIC-8.2□□□□□ -3.72
TOP2AP11388 RNU6-838P-201ENST00000363399 108 ntBASIC-8.21□□□□□ -3.72
TOP2AP11388 MIR3914-2-201ENST00000637339 95 ntBASIC-8.21□□□□□ -3.72
TOP2AP11388 RNU6-1020P-201ENST00000363684 107 ntBASIC-8.22□□□□□ -3.73
TOP2AP11388 AC022559.1-201ENST00000520905 205 ntBASIC-8.22□□□□□ -3.73
TOP2AP11388 SNORD30.1-201ENST00000391309 70 ntBASIC-8.23□□□□□ -3.73
TOP2AP11388 Y_RNA.273-201ENST00000364703 102 ntBASIC-8.24□□□□□ -3.73
TOP2AP11388 DEFB108C-201ENST00000400154 252 ntBASIC-8.25□□□□□ -3.73
TOP2AP11388 RNU7-107P-201ENST00000459121 61 ntBASIC-8.25□□□□□ -3.73
TOP2AP11388 AC110620.1-201ENST00000416042 228 ntBASIC-8.26□□□□□ -3.73
TOP2AP11388 AC114801.3-201ENST00000510231 177 ntBASIC-8.26□□□□□ -3.73
TOP2AP11388 Y_RNA.70-201ENST00000362886 110 ntBASIC-8.28□□□□□ -3.73
TOP2AP11388 RNU6-446P-201ENST00000362827 106 ntBASIC-8.29□□□□□ -3.74
TOP2AP11388 RNU6-675P-201ENST00000384236 104 ntBASIC-8.29□□□□□ -3.74
TOP2AP11388 Y_RNA.197-201ENST00000364004 102 ntBASIC-8.29□□□□□ -3.74
TOP2AP11388 Y_RNA.379-201ENST00000365653 102 ntBASIC-8.29□□□□□ -3.74
TOP2AP11388 U6.95-201ENST00000636931 70 ntBASIC-8.29□□□□□ -3.74
TOP2AP11388 SNORA33.2-201ENST00000365413 134 ntBASIC-8.31□□□□□ -3.74
TOP2AP11388 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-8.31□□□□□ -3.74
TOP2AP11388 MIR4679-1-201ENST00000637619 75 ntBASIC-8.31□□□□□ -3.74
TOP2AP11388 RNU6-787P-201ENST00000384032 107 ntBASIC-8.32□□□□□ -3.74
TOP2AP11388 RNU6-81P-201ENST00000365608 104 ntBASIC-8.33□□□□□ -3.74
TOP2AP11388 SNORD116-21-201ENST00000384507 92 ntBASIC-8.33□□□□□ -3.74
TOP2AP11388 MTATP6P25-201ENST00000574491 261 ntBASIC-8.33□□□□□ -3.74
TOP2AP11388 MIR4712-201ENST00000583750 82 ntBASIC-8.33□□□□□ -3.74
TOP2AP11388 MIR1245B-201ENST00000636115 69 ntBASIC-8.34□□□□□ -3.74
TOP2AP11388 AC004792.1-201ENST00000614523 137 ntBASIC-8.34□□□□□ -3.75
TOP2AP11388 RNU6-153P-201ENST00000364422 104 ntBASIC-8.36□□□□□ -3.75
TOP2AP11388 AC113195.1-201ENST00000579952 141 ntBASIC-8.36□□□□□ -3.75
TOP2AP11388 RNY4P19-201ENST00000362530 96 ntBASIC-8.39□□□□□ -3.75
TOP2AP11388 AC009094.1-201ENST00000564443 426 ntBASIC-8.39□□□□□ -3.75
TOP2AP11388 RNU6-294P-201ENST00000364999 102 ntBASIC-8.39□□□□□ -3.75
TOP2AP11388 Y_RNA.553-201ENST00000384670 102 ntBASIC-8.39□□□□□ -3.75
TOP2AP11388 Y_RNA.712-201ENST00000517011 92 ntBASIC-8.39□□□□□ -3.75
TOP2AP11388 AC006362.1-201ENST00000567392 174 ntBASIC-8.39□□□□□ -3.75
TOP2AP11388 MIR569-201ENST00000385228 96 ntBASIC-8.4□□□□□ -3.75
TOP2AP11388 Y_RNA.580-201ENST00000391004 95 ntBASIC-8.41□□□□□ -3.76
TOP2AP11388 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-8.41□□□□□ -3.76
TOP2AP11388 RNU6-506P-201ENST00000516553 94 ntBASIC-8.43□□□□□ -3.76
TOP2AP11388 SNORD113-4-201ENST00000364802 75 ntBASIC-8.44□□□□□ -3.76
TOP2AP11388 RNU6-713P-201ENST00000384761 107 ntBASIC-8.44□□□□□ -3.76
TOP2AP11388 MTND4LP9-201ENST00000427694 174 ntBASIC-8.44□□□□□ -3.76
TOP2AP11388 MALAT1.1-201ENST00000618249 95 ntBASIC-8.47□□□□□ -3.77
TOP2AP11388 U6.111-201ENST00000636093 83 ntBASIC-8.47□□□□□ -3.77
TOP2AP11388 RNU6-1091P-201ENST00000363945 107 ntBASIC-8.48□□□□□ -3.77
TOP2AP11388 U7.4-201ENST00000614961 63 ntBASIC-8.49□□□□□ -3.77
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms